RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 POU3F3P20264 500 aaPredicted RBP16.34■□□□□ 0.21
PABPC4-208ENST00000461578 TFAP4Q01664 338 aa16.34■□□□□ 0.21
PABPC4-208ENST00000461578 TMEM31Q5JXX7 168 aa16.34■□□□□ 0.21
PABPC4-208ENST00000461578 TSHZ3Q63HK5 1081 aa16.34■□□□□ 0.21
PABPC4-208ENST00000461578 KBTBD3Q8NAB2 608 aa16.34■□□□□ 0.21
PABPC4-208ENST00000461578 NEDD1Q8NHV4 660 aa16.34■□□□□ 0.21
PABPC4-208ENST00000461578 KHSRPQ92945 711 aaKnown RBP eCLIP16.34■□□□□ 0.21
PABPC4-208ENST00000461578 SLC9A7Q96T83 725 aa16.34■□□□□ 0.21
PABPC4-208ENST00000461578 LRRCC1Q9C099 1032 aa16.34■□□□□ 0.21
PABPC4-208ENST00000461578 FTOQ9C0B1 505 aaKnown RBP eCLIP16.34■□□□□ 0.21
PABPC4-208ENST00000461578 VTA1Q9NP79 307 aa16.34■□□□□ 0.21
PABPC4-208ENST00000461578 ZBTB40Q9NUA8 1239 aa16.34■□□□□ 0.21
PABPC4-208ENST00000461578 POLR3EQ9NVU0 708 aa16.34■□□□□ 0.21
PABPC4-208ENST00000461578 COG5Q9UP83 839 aa16.34■□□□□ 0.21
PABPC4-208ENST00000461578 TRANK1O15050 2925 aa16.33■□□□□ 0.21
PABPC4-208ENST00000461578 RNF113AO15541 343 aaKnown RBP16.33■□□□□ 0.2
PABPC4-208ENST00000461578 PURAQ00577 322 aaKnown RBP16.33■□□□□ 0.2
PABPC4-208ENST00000461578 TAP1Q03518 808 aa16.33■□□□□ 0.2
PABPC4-208ENST00000461578 DUSP28Q4G0W2 176 aa16.33■□□□□ 0.2
PABPC4-208ENST00000461578 SPRED2Q7Z698 418 aa16.33■□□□□ 0.2
PABPC4-208ENST00000461578 HLA-CQ95604 372 aa16.33■□□□□ 0.2
PABPC4-208ENST00000461578 GMCL1Q96IK5 515 aa16.33■□□□□ 0.2
PABPC4-208ENST00000461578 WDR11Q9BZH6 1224 aa16.33■□□□□ 0.2
PABPC4-208ENST00000461578 GPHNQ9NQX3 736 aaPredicted RBP16.33■□□□□ 0.2
PABPC4-208ENST00000461578 ECHDC1Q9NTX5 307 aa16.33■□□□□ 0.2
PABPC4-208ENST00000461578 CCPG1Q9ULG6 757 aa16.33■□□□□ 0.2
PABPC4-208ENST00000461578 PRR12Q9ULL5 1215 aa16.33■□□□□ 0.2
PABPC4-208ENST00000461578 DDX19BQ9UMR2 479 aa16.33■□□□□ 0.2
PABPC4-208ENST00000461578 PLIN4Q96Q06 1357 aa16.33■□□□□ 0.2
PABPC4-208ENST00000461578 GNAT2P19087 354 aa16.32■□□□□ 0.2
PABPC4-208ENST00000461578 COL4A4P53420 1690 aaPredicted RBP16.32■□□□□ 0.2
PABPC4-208ENST00000461578 PDE4BQ07343 736 aa16.32■□□□□ 0.2
PABPC4-208ENST00000461578 GRB10Q13322 594 aa16.32■□□□□ 0.2
PABPC4-208ENST00000461578 NBPF20Q3BBV1 942 aa16.32■□□□□ 0.2
PABPC4-208ENST00000461578 HERC6Q8IVU3 1022 aa16.32■□□□□ 0.2
PABPC4-208ENST00000461578 IFNL3Q8IZI9 196 aa16.32■□□□□ 0.2
PABPC4-208ENST00000461578 OR6J1Q8NGC5 347 aa16.32■□□□□ 0.2
PABPC4-208ENST00000461578 STX8Q9UNK0 236 aa16.32■□□□□ 0.2
PABPC4-208ENST00000461578 TANC1Q9C0D5 1861 aa16.31■□□□□ 0.2
PABPC4-208ENST00000461578 KIF28PB7ZC32 967 aa16.31■□□□□ 0.2
PABPC4-208ENST00000461578 PATL2C9JE40 543 aaKnown RBP16.31■□□□□ 0.2
PABPC4-208ENST00000461578 MS4A1P11836 297 aa16.31■□□□□ 0.2
PABPC4-208ENST00000461578 CPT1AP50416 773 aa16.31■□□□□ 0.2
PABPC4-208ENST00000461578 ALDH5A1P51649 535 aaPredicted RBP16.31■□□□□ 0.2
PABPC4-208ENST00000461578 CHMP4BP1P59074 171 aa16.31■□□□□ 0.2
PABPC4-208ENST00000461578 BAATQ14032 418 aaPredicted RBP16.31■□□□□ 0.2
PABPC4-208ENST00000461578 RETREG2Q8NC44 543 aa16.31■□□□□ 0.2
PABPC4-208ENST00000461578 MORC4Q8TE76 937 aa16.31■□□□□ 0.2
PABPC4-208ENST00000461578 MTG1Q9BT17 334 aaPredicted RBP16.31■□□□□ 0.2
PABPC4-208ENST00000461578 PTPDC1A2A3K4 754 aa16.3■□□□□ 0.2
PABPC4-208ENST00000461578 NMT2O60551 498 aa16.3■□□□□ 0.2
PABPC4-208ENST00000461578 IQCF3P0C7M6 154 aa16.3■□□□□ 0.2
PABPC4-208ENST00000461578 RFC2P35250 354 aa16.3■□□□□ 0.2
PABPC4-208ENST00000461578 PPARAQ07869 468 aa16.3■□□□□ 0.2
PABPC4-208ENST00000461578 CCDC96Q2M329 555 aa16.3■□□□□ 0.2
PABPC4-208ENST00000461578 RCSD1Q6JBY9 416 aa16.3■□□□□ 0.2
PABPC4-208ENST00000461578 TMCO2Q7Z6W1 182 aaPredicted RBP16.3■□□□□ 0.2
PABPC4-208ENST00000461578 PHOSPHO2Q8TCD6 241 aa16.3■□□□□ 0.2
PABPC4-208ENST00000461578 SEC62Q99442 399 aaKnown RBP16.3■□□□□ 0.2
PABPC4-208ENST00000461578 C11orf16Q9NQ32 467 aa16.3■□□□□ 0.2
PABPC4-208ENST00000461578 TET1Q8NFU7 2136 aa16.3■□□□□ 0.2
PABPC4-208ENST00000461578 TSPY2A6NKD2 308 aa16.29■□□□□ 0.2
PABPC4-208ENST00000461578 NFIBO00712 420 aa16.29■□□□□ 0.2
PABPC4-208ENST00000461578 LPXNO60711 386 aa16.29■□□□□ 0.2
PABPC4-208ENST00000461578 PLA2G6O60733 806 aa16.29■□□□□ 0.2
PABPC4-208ENST00000461578 ZFYP08048 801 aaPredicted RBP16.29■□□□□ 0.2
PABPC4-208ENST00000461578 SLC3A2P08195 630 aaKnown RBP16.29■□□□□ 0.2
PABPC4-208ENST00000461578 GDPD5Q8WTR4 605 aa16.29■□□□□ 0.2
PABPC4-208ENST00000461578 COPS5Q92905 334 aa16.29■□□□□ 0.2
PABPC4-208ENST00000461578 NACAP1Q9BZK3 213 aa16.29■□□□□ 0.2
PABPC4-208ENST00000461578 NAPBQ9H115 298 aa16.29■□□□□ 0.2
PABPC4-208ENST00000461578 INCENPQ9NQS7 918 aa16.29■□□□□ 0.2
PABPC4-208ENST00000461578 ADD3Q9UEY8 706 aaKnown RBP16.29■□□□□ 0.2
PABPC4-208ENST00000461578 NOD1Q9Y239 953 aa16.29■□□□□ 0.2
PABPC4-208ENST00000461578 ARIH1Q9Y4X5 557 aaPredicted RBP16.29■□□□□ 0.2
PABPC4-208ENST00000461578 SCN10AQ9Y5Y9 1956 aa16.29■□□□□ 0.2
PABPC4-208ENST00000461578 PTPRSQ13332 1948 aa16.29■□□□□ 0.2
PABPC4-208ENST00000461578 LCHNA4D1U4 455 aa16.28■□□□□ 0.2
PABPC4-208ENST00000461578 PITPNM1O00562 1244 aa16.28■□□□□ 0.2
PABPC4-208ENST00000461578 ICAM1P05362 532 aa16.28■□□□□ 0.2
PABPC4-208ENST00000461578 CALML3P27482 149 aa16.28■□□□□ 0.2
PABPC4-208ENST00000461578 SLC16A2P36021 539 aa16.28■□□□□ 0.2
PABPC4-208ENST00000461578 KCNJ6P48051 423 aa16.28■□□□□ 0.2
PABPC4-208ENST00000461578 BRDTQ58F21 947 aaPredicted RBP16.28■□□□□ 0.2
PABPC4-208ENST00000461578 TTBK2Q6IQ55 1244 aa16.28■□□□□ 0.2
PABPC4-208ENST00000461578 SLC30A10Q6XR72 485 aa16.28■□□□□ 0.2
PABPC4-208ENST00000461578 CD320Q9NPF0 282 aa16.28■□□□□ 0.2
PABPC4-208ENST00000461578 MTUS1Q9ULD2 1270 aa16.28■□□□□ 0.2
PABPC4-208ENST00000461578 RAD50Q92878 1312 aa16.27■□□□□ 0.2
PABPC4-208ENST00000461578 RBAK-RBAKDNI3L0D1 243 aa16.27■□□□□ 0.2
PABPC4-208ENST00000461578 GPR37L1O60883 481 aa16.27■□□□□ 0.2
PABPC4-208ENST00000461578 CTDSPL2Q05D32 466 aa16.27■□□□□ 0.2
PABPC4-208ENST00000461578 BFSP2Q13515 415 aa16.27■□□□□ 0.2
PABPC4-208ENST00000461578 PPP2R5BQ15173 497 aa16.27■□□□□ 0.2
PABPC4-208ENST00000461578 NFRKBQ6P4R8 1299 aa16.27■□□□□ 0.2
PABPC4-208ENST00000461578 GPATCH3Q96I76 525 aa16.27■□□□□ 0.2
PABPC4-208ENST00000461578 IL17RBQ9NRM6 502 aa16.27■□□□□ 0.2
PABPC4-208ENST00000461578 TRIP12Q14669 1992 aaPredicted RBP16.27■□□□□ 0.19
PABPC4-208ENST00000461578 RBM47A0AV96 593 aaKnown RBP16.26■□□□□ 0.19
PABPC4-208ENST00000461578 PDE4DQ08499 809 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms