RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 FRMPD3Q5JV73 1810 aa11.78□□□□□ -0.52
SYN3-206ENST00000461446 CCDC196A0A1B0GTZ2 297 aa11.77□□□□□ -0.53
SYN3-206ENST00000461446 CYTH3O43739 400 aa11.77□□□□□ -0.53
SYN3-206ENST00000461446 DHX16O60231 1041 aaKnown RBP11.77□□□□□ -0.53
SYN3-206ENST00000461446 ZNF865P0CJ78 1059 aaPredicted RBP11.77□□□□□ -0.53
SYN3-206ENST00000461446 CDC27P30260 824 aa11.77□□□□□ -0.53
SYN3-206ENST00000461446 ADD1P35611 737 aaKnown RBP11.77□□□□□ -0.53
SYN3-206ENST00000461446 LRRC26Q2I0M4 334 aa11.77□□□□□ -0.53
SYN3-206ENST00000461446 HABP4Q5JVS0 413 aaKnown RBP11.77□□□□□ -0.53
SYN3-206ENST00000461446 MAMDC4Q6UXC1 1216 aa11.77□□□□□ -0.53
SYN3-206ENST00000461446 CHRDL2Q6WN34 429 aa11.77□□□□□ -0.53
SYN3-206ENST00000461446 TMTC3Q6ZXV5 915 aa11.77□□□□□ -0.53
SYN3-206ENST00000461446 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.77□□□□□ -0.53
SYN3-206ENST00000461446 SRBD1Q8N5C6 995 aaKnown RBP11.77□□□□□ -0.53
SYN3-206ENST00000461446 MTMR8Q96EF0 704 aa11.77□□□□□ -0.53
SYN3-206ENST00000461446 PURBQ96QR8 312 aaKnown RBP11.77□□□□□ -0.53
SYN3-206ENST00000461446 SPZ1Q9BXG8 430 aa11.77□□□□□ -0.53
SYN3-206ENST00000461446 SENP6Q9GZR1 1112 aaPredicted RBP11.77□□□□□ -0.53
SYN3-206ENST00000461446 A1CFQ9NQ94 594 aaKnown RBP11.77□□□□□ -0.53
SYN3-206ENST00000461446 TPCN1Q9ULQ1 816 aa11.77□□□□□ -0.53
SYN3-206ENST00000461446 ZMYND8Q9ULU4 1186 aaPredicted RBP11.77□□□□□ -0.53
SYN3-206ENST00000461446 CNPY2Q9Y2B0 182 aa11.77□□□□□ -0.53
SYN3-206ENST00000461446 NID2Q14112 1375 aa11.77□□□□□ -0.53
SYN3-206ENST00000461446 MCM3APO60318 1980 aa11.76□□□□□ -0.53
SYN3-206ENST00000461446 SOWAHBA6NEL2 793 aa11.76□□□□□ -0.53
SYN3-206ENST00000461446 POTEB2H3BUK9 544 aa11.76□□□□□ -0.53
SYN3-206ENST00000461446 DNM1LO00429 736 aa11.76□□□□□ -0.53
SYN3-206ENST00000461446 PLEKHA8P1O95397 391 aa11.76□□□□□ -0.53
SYN3-206ENST00000461446 PGK1P00558 417 aa11.76□□□□□ -0.53
SYN3-206ENST00000461446 ICAM1P05362 532 aa11.76□□□□□ -0.53
SYN3-206ENST00000461446 ANP32AP39687 249 aaKnown RBP11.76□□□□□ -0.53
SYN3-206ENST00000461446 ATN1P54259 1190 aaPredicted RBP11.76□□□□□ -0.53
SYN3-206ENST00000461446 CCT2P78371 535 aaKnown RBP11.76□□□□□ -0.53
SYN3-206ENST00000461446 CDC37Q16543 378 aaPredicted RBP11.76□□□□□ -0.53
SYN3-206ENST00000461446 TKFCQ3LXA3 575 aa11.76□□□□□ -0.53
SYN3-206ENST00000461446 CMTR1Q8N1G2 835 aaKnown RBP11.76□□□□□ -0.53
SYN3-206ENST00000461446 FAM133AQ8N9E0 248 aa11.76□□□□□ -0.53
SYN3-206ENST00000461446 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.76□□□□□ -0.53
SYN3-206ENST00000461446 NRBP1Q9UHY1 535 aa11.76□□□□□ -0.53
SYN3-206ENST00000461446 ZHX1Q9UKY1 873 aaPredicted RBP11.76□□□□□ -0.53
SYN3-206ENST00000461446 PNMA2Q9UL42 364 aa11.76□□□□□ -0.53
SYN3-206ENST00000461446 BAZ2BQ9UIF8 2168 aaKnown RBP11.75□□□□□ -0.53
SYN3-206ENST00000461446 TRIOBPQ9H2D6 2365 aa11.75□□□□□ -0.53
SYN3-206ENST00000461446 NFIBO00712 420 aa11.75□□□□□ -0.53
SYN3-206ENST00000461446 ZBTB5O15062 677 aa11.75□□□□□ -0.53
SYN3-206ENST00000461446 ST18O60284 1047 aa11.75□□□□□ -0.53
SYN3-206ENST00000461446 PFKFB2O60825 505 aa11.75□□□□□ -0.53
SYN3-206ENST00000461446 RARBP10826 455 aa11.75□□□□□ -0.53
SYN3-206ENST00000461446 SYN1P17600 705 aa11.75□□□□□ -0.53
SYN3-206ENST00000461446 FUT2Q10981 343 aa11.75□□□□□ -0.53
SYN3-206ENST00000461446 LRRC41Q15345 812 aa11.75□□□□□ -0.53
SYN3-206ENST00000461446 QRICH1Q2TAL8 776 aa11.75□□□□□ -0.53
SYN3-206ENST00000461446 NSMFQ6X4W1 530 aa11.75□□□□□ -0.53
SYN3-206ENST00000461446 ARMCX2Q7L311 632 aa11.75□□□□□ -0.53
SYN3-206ENST00000461446 ZNF467Q7Z7K2 595 aaPredicted RBP11.75□□□□□ -0.53
SYN3-206ENST00000461446 CCDC82Q8N4S0 544 aa11.75□□□□□ -0.53
SYN3-206ENST00000461446 MSL3Q8N5Y2 521 aaKnown RBP11.75□□□□□ -0.53
SYN3-206ENST00000461446 ARRDC4Q8NCT1 418 aa11.75□□□□□ -0.53
SYN3-206ENST00000461446 PIGSQ96S52 555 aa11.75□□□□□ -0.53
SYN3-206ENST00000461446 NCOA5Q9HCD5 579 aaKnown RBP11.75□□□□□ -0.53
SYN3-206ENST00000461446 XPNPEP3Q9NQH7 507 aa11.75□□□□□ -0.53
SYN3-206ENST00000461446 CYP39A1Q9NYL5 469 aa11.75□□□□□ -0.53
SYN3-206ENST00000461446 RBM27Q9P2N5 1060 aaKnown RBP11.75□□□□□ -0.53
SYN3-206ENST00000461446 ASTN1O14525 1302 aa11.75□□□□□ -0.53
SYN3-206ENST00000461446 SYNGAP1Q96PV0 1343 aa11.75□□□□□ -0.53
SYN3-206ENST00000461446 PNMA6FA0A0J9YX94 578 aa11.74□□□□□ -0.53
SYN3-206ENST00000461446 ADCY6O43306 1168 aa11.74□□□□□ -0.53
SYN3-206ENST00000461446 LARGE1O95461 756 aa11.74□□□□□ -0.53
SYN3-206ENST00000461446 AKR1A1P14550 325 aa11.74□□□□□ -0.53
SYN3-206ENST00000461446 IRX5P78411 483 aaPredicted RBP11.74□□□□□ -0.53
SYN3-206ENST00000461446 STK3Q13188 491 aa11.74□□□□□ -0.53
SYN3-206ENST00000461446 ACVR2BQ13705 512 aa11.74□□□□□ -0.53
SYN3-206ENST00000461446 BAATQ14032 418 aaPredicted RBP11.74□□□□□ -0.53
SYN3-206ENST00000461446 NTRK3Q16288 839 aa11.74□□□□□ -0.53
SYN3-206ENST00000461446 ME3Q16798 604 aa11.74□□□□□ -0.53
SYN3-206ENST00000461446 NOL8Q76FK4 1167 aaKnown RBP11.74□□□□□ -0.53
SYN3-206ENST00000461446 FBXO11Q86XK2 927 aa11.74□□□□□ -0.53
SYN3-206ENST00000461446 HOMER1Q86YM7 354 aa11.74□□□□□ -0.53
SYN3-206ENST00000461446 CLEC4DQ8WXI8 215 aa11.74□□□□□ -0.53
SYN3-206ENST00000461446 FERMT2Q96AC1 680 aa11.74□□□□□ -0.53
SYN3-206ENST00000461446 RRP36Q96EU6 259 aaKnown RBP11.74□□□□□ -0.53
SYN3-206ENST00000461446 AMNQ9BXJ7 453 aa11.74□□□□□ -0.53
SYN3-206ENST00000461446 SLKQ9H2G2 1235 aaPredicted RBP11.74□□□□□ -0.53
SYN3-206ENST00000461446 LIMCH1Q9UPQ0 1083 aa11.74□□□□□ -0.53
SYN3-206ENST00000461446 KBTBD13C9JR72 458 aa11.73□□□□□ -0.53
SYN3-206ENST00000461446 PPP1R11O60927 126 aaPredicted RBP11.73□□□□□ -0.53
SYN3-206ENST00000461446 IFNAR1P17181 557 aa11.73□□□□□ -0.53
SYN3-206ENST00000461446 PTGS1P23219 599 aa11.73□□□□□ -0.53
SYN3-206ENST00000461446 ADCYAP1R1P41586 468 aa11.73□□□□□ -0.53
SYN3-206ENST00000461446 SCRN1Q12765 414 aa11.73□□□□□ -0.53
SYN3-206ENST00000461446 CCDC144BQ3MJ40 725 aa11.73□□□□□ -0.53
SYN3-206ENST00000461446 USH1GQ495M9 461 aa11.73□□□□□ -0.53
SYN3-206ENST00000461446 PIBF1Q8WXW3 757 aa11.73□□□□□ -0.53
SYN3-206ENST00000461446 CNTNAP5Q8WYK1 1306 aa11.73□□□□□ -0.53
SYN3-206ENST00000461446 KATNBL1Q9H079 304 aa11.73□□□□□ -0.53
SYN3-206ENST00000461446 FAM184BQ9ULE4 1060 aa11.73□□□□□ -0.53
SYN3-206ENST00000461446 V9GY48 417 aaPredicted RBP11.73□□□□□ -0.53
SYN3-206ENST00000461446 hCG_1642624A0A1W2PR95 340 aa11.72□□□□□ -0.53
SYN3-206ENST00000461446 PTPDC1A2A3K4 754 aa11.72□□□□□ -0.53
SYN3-206ENST00000461446 MYADML2A6NDP7 307 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms