RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 A1CFQ9NQ94 594 aaKnown RBP25.94■■□□□ 1.74
C9orf3-209ENST00000460573 MAP3K20Q9NYL2 800 aaKnown RBP25.94■■□□□ 1.74
C9orf3-209ENST00000460573 MYH6P13533 1939 aa25.94■■□□□ 1.74
C9orf3-209ENST00000460573 NSMFQ6X4W1 530 aa25.93■■□□□ 1.74
C9orf3-209ENST00000460573 TRIM22Q8IYM9 498 aa25.93■■□□□ 1.74
C9orf3-209ENST00000460573 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.93■■□□□ 1.741e-7■■■■■ 39.6
C9orf3-209ENST00000460573 HMX1Q9NP08 348 aaPredicted RBP25.93■■□□□ 1.74
C9orf3-209ENST00000460573 SH2B1Q9NRF2 756 aaPredicted RBP25.93■■□□□ 1.74
C9orf3-209ENST00000460573 BAZ2BQ9UIF8 2168 aaKnown RBP25.93■■□□□ 1.74
C9orf3-209ENST00000460573 DNAJC25-GNG10A0A024R161 153 aa25.92■■□□□ 1.74
C9orf3-209ENST00000460573 NFIBO00712 420 aa25.92■■□□□ 1.74
C9orf3-209ENST00000460573 COBLO75128 1261 aa25.92■■□□□ 1.74
C9orf3-209ENST00000460573 CAPN2P17655 700 aa25.92■■□□□ 1.74
C9orf3-209ENST00000460573 CYP39A1Q9NYL5 469 aa25.92■■□□□ 1.74
C9orf3-209ENST00000460573 PGK2P07205 417 aa25.91■■□□□ 1.74
C9orf3-209ENST00000460573 TAL1P17542 331 aaPredicted RBP25.91■■□□□ 1.74
C9orf3-209ENST00000460573 SSRP1Q08945 709 aaKnown RBP25.91■■□□□ 1.74
C9orf3-209ENST00000460573 ZNF792Q3KQV3 632 aa25.91■■□□□ 1.74
C9orf3-209ENST00000460573 RNF207Q6ZRF8 634 aa25.91■■□□□ 1.74
C9orf3-209ENST00000460573 GTF3C6Q969F1 213 aa25.91■■□□□ 1.74
C9orf3-209ENST00000460573 BRCA2P51587 3418 aa25.91■■□□□ 1.74
C9orf3-209ENST00000460573 PTPDC1A2A3K4 754 aa25.9■■□□□ 1.74
C9orf3-209ENST00000460573 POTEB2H3BUK9 544 aa25.9■■□□□ 1.74
C9orf3-209ENST00000460573 SLC34A2O95436 690 aa25.9■■□□□ 1.74
C9orf3-209ENST00000460573 GHRHRQ02643 423 aa25.9■■□□□ 1.74
C9orf3-209ENST00000460573 BAATQ14032 418 aaPredicted RBP25.9■■□□□ 1.74
C9orf3-209ENST00000460573 PFKFB3Q16875 520 aaPredicted RBP25.9■■□□□ 1.74
C9orf3-209ENST00000460573 NPLOC4Q8TAT6 608 aa25.9■■□□□ 1.74
C9orf3-209ENST00000460573 PHKBQ93100 1093 aa25.9■■□□□ 1.74
C9orf3-209ENST00000460573 SLC26A6Q9BXS9 759 aa25.9■■□□□ 1.74
C9orf3-209ENST00000460573 RPTORQ8N122 1335 aa25.89■■□□□ 1.74
C9orf3-209ENST00000460573 ZNFX1Q9P2E3 1918 aaKnown RBP25.89■■□□□ 1.74
C9orf3-209ENST00000460573 hCG_1642624A0A1W2PR95 340 aa25.89■■□□□ 1.74
C9orf3-209ENST00000460573 LARGE1O95461 756 aa25.89■■□□□ 1.74
C9orf3-209ENST00000460573 SCG2P13521 617 aa25.89■■□□□ 1.74
C9orf3-209ENST00000460573 OLFML2BQ68BL8 750 aa25.89■■□□□ 1.74
C9orf3-209ENST00000460573 ZNF467Q7Z7K2 595 aaPredicted RBP25.89■■□□□ 1.74
C9orf3-209ENST00000460573 TEX2Q8IWB9 1127 aa25.89■■□□□ 1.74
C9orf3-209ENST00000460573 MSL3Q8N5Y2 521 aaKnown RBP25.89■■□□□ 1.74
C9orf3-209ENST00000460573 FAM133AQ8N9E0 248 aa25.89■■□□□ 1.74
C9orf3-209ENST00000460573 SMCHD1A6NHR9 2005 aa25.88■■□□□ 1.73
C9orf3-209ENST00000460573 RPS6P62753 249 aaKnown RBP25.88■■□□□ 1.73
C9orf3-209ENST00000460573 PPP1R18Q6NYC8 613 aa25.88■■□□□ 1.73
C9orf3-209ENST00000460573 HEATR3Q7Z4Q2 680 aa25.88■■□□□ 1.73
C9orf3-209ENST00000460573 TRIB2Q92519 343 aa25.88■■□□□ 1.73
C9orf3-209ENST00000460573 MAML3Q96JK9 1138 aa25.88■■□□□ 1.73
C9orf3-209ENST00000460573 PAK6Q9NQU5 681 aaPredicted RBP25.88■■□□□ 1.73
C9orf3-209ENST00000460573 BARHL2Q9NY43 387 aa25.88■■□□□ 1.73
C9orf3-209ENST00000460573 LOC102724159A0A0B4J2E5 919 aa25.87■■□□□ 1.73
C9orf3-209ENST00000460573 DEXIO95424 95 aa25.87■■□□□ 1.73
C9orf3-209ENST00000460573 CFBP00751 764 aa25.87■■□□□ 1.73
C9orf3-209ENST00000460573 HSD17B4P51659 736 aa25.87■■□□□ 1.73
C9orf3-209ENST00000460573 PWP2Q15269 919 aaKnown RBP25.87■■□□□ 1.73
C9orf3-209ENST00000460573 WWC2Q6AWC2 1192 aa25.87■■□□□ 1.73
C9orf3-209ENST00000460573 NECAB1Q8N987 351 aa25.87■■□□□ 1.73
C9orf3-209ENST00000460573 ADD3Q9UEY8 706 aaKnown RBP25.87■■□□□ 1.73
C9orf3-209ENST00000460573 STK36Q9NRP7 1315 aa25.87■■□□□ 1.73
C9orf3-209ENST00000460573 GCOM1H8Y6P7 765 aaPredicted RBP25.86■■□□□ 1.73
C9orf3-209ENST00000460573 OPLAHO14841 1288 aa25.86■■□□□ 1.73
C9orf3-209ENST00000460573 POLR2MP0CAP2 368 aa25.86■■□□□ 1.73
C9orf3-209ENST00000460573 PRKAR2AP13861 404 aaKnown RBP25.86■■□□□ 1.73
C9orf3-209ENST00000460573 CALML3P27482 149 aa25.86■■□□□ 1.73
C9orf3-209ENST00000460573 PKN1Q16512 942 aa25.86■■□□□ 1.73
C9orf3-209ENST00000460573 MFSD14CQ5VZR4 134 aa25.86■■□□□ 1.73
C9orf3-209ENST00000460573 CCDC12Q8WUD4 166 aaPredicted RBP25.86■■□□□ 1.73
C9orf3-209ENST00000460573 GPKOWQ92917 476 aaPredicted RBP eCLIP25.86■■□□□ 1.73
C9orf3-209ENST00000460573 GLT8D2Q9H1C3 349 aa25.86■■□□□ 1.73
C9orf3-209ENST00000460573 NR2E3Q9Y5X4 410 aa25.86■■□□□ 1.73
C9orf3-209ENST00000460573 MKI67P46013 3256 aaKnown RBP25.86■■□□□ 1.73
C9orf3-209ENST00000460573 IGHA2P01877 340 aa25.85■■□□□ 1.73
C9orf3-209ENST00000460573 NAPAP54920 295 aa25.85■■□□□ 1.73
C9orf3-209ENST00000460573 CNTN2Q02246 1040 aa25.85■■□□□ 1.73
C9orf3-209ENST00000460573 TRIM32Q13049 653 aa25.85■■□□□ 1.73
C9orf3-209ENST00000460573 CCL14Q16627 93 aa25.85■■□□□ 1.73
C9orf3-209ENST00000460573 MAMDC4Q6UXC1 1216 aa25.85■■□□□ 1.73
C9orf3-209ENST00000460573 SLC30A10Q6XR72 485 aa25.85■■□□□ 1.73
C9orf3-209ENST00000460573 FAM177A1Q8N128 213 aaPredicted RBP25.85■■□□□ 1.73
C9orf3-209ENST00000460573 DNERQ8NFT8 737 aa25.85■■□□□ 1.73
C9orf3-209ENST00000460573 TBC1D5Q92609 795 aa25.85■■□□□ 1.73
C9orf3-209ENST00000460573 CUL5Q93034 780 aa25.85■■□□□ 1.73
C9orf3-209ENST00000460573 LLPHQ9BRT6 129 aaKnown RBP25.85■■□□□ 1.73
C9orf3-209ENST00000460573 ASB14A6NK59 587 aa25.84■■□□□ 1.73
C9orf3-209ENST00000460573 B4DLN1 442 aa25.84■■□□□ 1.73
C9orf3-209ENST00000460573 H0YGN5 161 aa25.84■■□□□ 1.73
C9orf3-209ENST00000460573 STXBP3O00186 592 aa25.84■■□□□ 1.73
C9orf3-209ENST00000460573 MRPL12P52815 198 aaKnown RBP25.84■■□□□ 1.73
C9orf3-209ENST00000460573 SYTL5Q8TDW5 730 aaPredicted RBP25.84■■□□□ 1.73
C9orf3-209ENST00000460573 WASF1Q92558 559 aa25.84■■□□□ 1.73
C9orf3-209ENST00000460573 MPHOSPH6Q99547 160 aaKnown RBP25.84■■□□□ 1.73
C9orf3-209ENST00000460573 TINF2Q9BSI4 451 aa25.84■■□□□ 1.73
C9orf3-209ENST00000460573 PSTPIP2Q9H939 334 aa25.84■■□□□ 1.73
C9orf3-209ENST00000460573 SH3GLB2Q9NR46 395 aa25.84■■□□□ 1.73
C9orf3-209ENST00000460573 FLRT1Q9NZU1 646 aa25.84■■□□□ 1.73
C9orf3-209ENST00000460573 SYNGAP1Q96PV0 1343 aa25.84■■□□□ 1.73
C9orf3-209ENST00000460573 PIK3CDO00329 1044 aa25.83■■□□□ 1.73
C9orf3-209ENST00000460573 EVI5O60447 810 aa25.83■■□□□ 1.73
C9orf3-209ENST00000460573 CTDNEP1O95476 244 aa25.83■■□□□ 1.73
C9orf3-209ENST00000460573 NECAB2Q7Z6G3 386 aa25.83■■□□□ 1.73
C9orf3-209ENST00000460573 NRBP1Q9UHY1 535 aa25.83■■□□□ 1.73
C9orf3-209ENST00000460573 PLXNA1Q9UIW2 1896 aa25.83■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms