RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 NKX2-3Q8TAU0 364 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 TBCKQ8TEA7 893 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 CNKSR2Q8WXI2 1034 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 C12orf42Q96LP6 360 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 TRERF1Q96PN7 1200 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 USP28Q96RU2 1077 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 NAT10Q9H0A0 1025 aaKnown RBP6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 RANBP17Q9H2T7 1088 aaKnown RBP6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 CPVLQ9H3G5 476 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 GJB4Q9NTQ9 266 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 PPP1R9AQ9ULJ8 1098 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 ABT1Q9ULW3 272 aaKnown RBP6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 PCDHA6Q9UN73 950 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 PCDHA8Q9Y5H6 950 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 CLIC4Q9Y696 253 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 PAPPA2Q9BXP8 1791 aa6.62□□□□□ -1.35
RNU1-88P-201ENST00000459274 PFASO15067 1338 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 MYH7BA7E2Y1 1941 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 VWA3AA6NCI4 1184 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 GOLGA6L3A6NEY3 463 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 VWA5AO00534 786 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 SMC2O95347 1197 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 CAVIN2O95810 425 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 CCDC192P0DO97 292 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 LONP1P36776 959 aaKnown RBP6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 STAT3P40763 770 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 PRPHP41219 470 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 ZNF157P51786 506 aaPredicted RBP6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 HUNKP57058 714 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 SREBF2Q12772 1141 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 PTGDRQ13258 359 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 GSE1Q14687 1217 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 ARHGEF16Q5VV41 709 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 KRT79Q5XKE5 535 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 SNRNP48Q6IEG0 339 aaKnown RBP6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 NSMFQ6X4W1 530 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 RNF207Q6ZRF8 634 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 NLRX1Q86UT6 975 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 SIAH1Q8IUQ4 282 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 ANKRD35Q8N283 1001 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 FSIP1Q8NA03 581 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 OXER1Q8TDS5 423 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 CCDC102AQ96A19 550 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 MTMR8Q96EF0 704 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 AK8Q96MA6 479 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 DCBLD2Q96PD2 775 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 TEX13BQ9BXU2 312 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 GTPBP4Q9BZE4 634 aaKnown RBP6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 ACAD9Q9H845 621 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 RAVER2Q9HCJ3 691 aaKnown RBP6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 HOMER2Q9NSB8 354 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 BMP2KQ9NSY1 1161 aaPredicted RBP6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 EMILIN3Q9NT22 766 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 ADD3Q9UEY8 706 aaKnown RBP6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 DDX25Q9UHL0 483 aaKnown RBP6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 PCDHA7Q9UN72 937 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 PCDHA12Q9UN75 941 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 AGTPBP1Q9UPW5 1226 aa6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 SRPRBQ9Y5M8 271 aaKnown RBP6.61□□□□□ -1.35
RNU1-88P-201ENST00000459274 COL11A1P12107 1806 aaPredicted RBP6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 MANSC4A6NHS7 340 aaPredicted RBP6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 KIF28PB7ZC32 967 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 PIK3CDO00329 1044 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 IRF6O14896 467 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 OR52Z1P0C646 297 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 SLURP2P0DP57 97 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 HOXA7P31268 230 aaPredicted RBP6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 TXKP42681 527 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 GCLCP48506 637 aaPredicted RBP6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 SNAP25P60880 206 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 SETQ01105 290 aaPredicted RBP6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 KCTD2Q14681 263 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 RRP1BQ14684 758 aaKnown RBP6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 GNPTABQ3T906 1256 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 HAUS3Q68CZ6 603 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 PPP4R3AQ6IN85 833 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 XRRA1Q6P2D8 792 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 MOXD1Q6UVY6 613 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 CCDC84Q86UT8 332 aaPredicted RBP6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 NCAPG2Q86XI2 1143 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 IQUBQ8NA54 791 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 CNNM3Q8NE01 707 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 NSUN6Q8TEA1 469 aaKnown RBP6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 CDHR1Q96JP9 859 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 CCDC43Q96MW1 224 aaKnown RBP6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 PARK7Q99497 189 aaKnown RBP6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 PAGR1Q9BTK6 254 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 ANO3Q9BYT9 981 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 NT5C3AQ9H0P0 336 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 MROH8Q9H579 483 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 SLC38A10Q9HBR0 1119 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 NMRK2Q9NPI5 230 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 LRWD1Q9UFC0 647 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 DACH1Q9UI36 760 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 KCNH3Q9ULD8 1083 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 SLC45A1Q9Y2W3 748 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 PCDHB6Q9Y5E3 794 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 SNCAIPQ9Y6H5 919 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms