RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 CEP95Q96GE4 821 aa13.42□□□□□ -0.26
PRAMEF35P-201ENST00000458709 PURBQ96QR8 312 aaKnown RBP13.42□□□□□ -0.26
PRAMEF35P-201ENST00000458709 Q9Y3F1 56 aa13.42□□□□□ -0.26
PRAMEF35P-201ENST00000458709 LCHNA4D1U4 455 aa13.41□□□□□ -0.26
PRAMEF35P-201ENST00000458709 PRR33A8MZF0 331 aa13.41□□□□□ -0.26
PRAMEF35P-201ENST00000458709 TMEM232C9JQI7 657 aa13.41□□□□□ -0.26
PRAMEF35P-201ENST00000458709 PRDM1O75626 825 aa13.41□□□□□ -0.26
PRAMEF35P-201ENST00000458709 SUPT20HL2P0C7V6 817 aa13.41□□□□□ -0.26
PRAMEF35P-201ENST00000458709 ALAS1P13196 640 aa13.41□□□□□ -0.26
PRAMEF35P-201ENST00000458709 PURAQ00577 322 aaKnown RBP13.41□□□□□ -0.26
PRAMEF35P-201ENST00000458709 SBK1Q52WX2 424 aa13.41□□□□□ -0.26
PRAMEF35P-201ENST00000458709 IQSEC1Q6DN90 963 aa13.41□□□□□ -0.26
PRAMEF35P-201ENST00000458709 GMCL1P1Q8NEA9 526 aa13.41□□□□□ -0.26
PRAMEF35P-201ENST00000458709 PHOSPHO2Q8TCD6 241 aa13.41□□□□□ -0.26
PRAMEF35P-201ENST00000458709 CHMP4CQ96CF2 233 aa13.41□□□□□ -0.26
PRAMEF35P-201ENST00000458709 HAUS7Q99871 368 aa13.41□□□□□ -0.26
PRAMEF35P-201ENST00000458709 RWDD1Q9H446 243 aaPredicted RBP13.41□□□□□ -0.26
PRAMEF35P-201ENST00000458709 ISY1Q9ULR0 285 aaKnown RBP13.41□□□□□ -0.26
PRAMEF35P-201ENST00000458709 MYH4Q9Y623 1939 aa13.41□□□□□ -0.26
PRAMEF35P-201ENST00000458709 TANC1Q9C0D5 1861 aa13.4□□□□□ -0.26
PRAMEF35P-201ENST00000458709 MINDY4BA8MYZ0 360 aa13.4□□□□□ -0.26
PRAMEF35P-201ENST00000458709 KIF28PB7ZC32 967 aa13.4□□□□□ -0.26
PRAMEF35P-201ENST00000458709 MYL3P08590 195 aa13.4□□□□□ -0.26
PRAMEF35P-201ENST00000458709 IQCF3P0C7M6 154 aa13.4□□□□□ -0.26
PRAMEF35P-201ENST00000458709 BMP3P12645 472 aa13.4□□□□□ -0.26
PRAMEF35P-201ENST00000458709 ATP5JP18859 108 aa13.4□□□□□ -0.26
PRAMEF35P-201ENST00000458709 MRE11P49959 708 aa13.4□□□□□ -0.26
PRAMEF35P-201ENST00000458709 MUM1L1Q5H9M0 696 aa13.4□□□□□ -0.26
PRAMEF35P-201ENST00000458709 FAM47CQ5HY64 1035 aa13.4□□□□□ -0.26
PRAMEF35P-201ENST00000458709 SLFN13Q68D06 897 aa13.4□□□□□ -0.26
PRAMEF35P-201ENST00000458709 KIAA1211Q6ZU35 1233 aa13.4□□□□□ -0.26
PRAMEF35P-201ENST00000458709 TMCO2Q7Z6W1 182 aaPredicted RBP13.4□□□□□ -0.26
PRAMEF35P-201ENST00000458709 MKL1Q969V6 931 aa13.4□□□□□ -0.26
PRAMEF35P-201ENST00000458709 TRERF1Q96PN7 1200 aa13.4□□□□□ -0.26
PRAMEF35P-201ENST00000458709 STRBPQ96SI9 672 aaKnown RBP13.4□□□□□ -0.26
PRAMEF35P-201ENST00000458709 FTOQ9C0B1 505 aaKnown RBP eCLIP13.4□□□□□ -0.26
PRAMEF35P-201ENST00000458709 MTMR4Q9NYA4 1195 aa13.4□□□□□ -0.26
PRAMEF35P-201ENST00000458709 SSUH2Q9Y2M2 353 aa13.4□□□□□ -0.26
PRAMEF35P-201ENST00000458709 LCTP09848 1927 aa13.39□□□□□ -0.27
PRAMEF35P-201ENST00000458709 GSG1L2A8MUP6 293 aa13.39□□□□□ -0.27
PRAMEF35P-201ENST00000458709 RBAK-RBAKDNI3L0D1 243 aa13.39□□□□□ -0.27
PRAMEF35P-201ENST00000458709 TTLL1O95922 423 aa13.39□□□□□ -0.27
PRAMEF35P-201ENST00000458709 RFC2P35250 354 aa13.39□□□□□ -0.27
PRAMEF35P-201ENST00000458709 STAT2P52630 851 aa13.39□□□□□ -0.27
PRAMEF35P-201ENST00000458709 SNAP25P60880 206 aa13.39□□□□□ -0.27
PRAMEF35P-201ENST00000458709 IRX6P78412 446 aaPredicted RBP13.39□□□□□ -0.27
PRAMEF35P-201ENST00000458709 DUSP28Q4G0W2 176 aa13.39□□□□□ -0.27
PRAMEF35P-201ENST00000458709 GJD3Q8N144 294 aa13.39□□□□□ -0.27
PRAMEF35P-201ENST00000458709 UIMC1Q96RL1 719 aa13.39□□□□□ -0.27
PRAMEF35P-201ENST00000458709 UBE2ZQ9H832 354 aaPredicted RBP13.39□□□□□ -0.27
PRAMEF35P-201ENST00000458709 EPB41L4AQ9HCS5 686 aaPredicted RBP13.39□□□□□ -0.27
PRAMEF35P-201ENST00000458709 VTA1Q9NP79 307 aa13.39□□□□□ -0.27
PRAMEF35P-201ENST00000458709 POLR3EQ9NVU0 708 aa13.39□□□□□ -0.27
PRAMEF35P-201ENST00000458709 CYP39A1Q9NYL5 469 aa13.39□□□□□ -0.27
PRAMEF35P-201ENST00000458709 PTPRSQ13332 1948 aa13.39□□□□□ -0.27
PRAMEF35P-201ENST00000458709 PITPNM1O00562 1244 aa13.38□□□□□ -0.27
PRAMEF35P-201ENST00000458709 IGHDP01880 384 aa13.38□□□□□ -0.27
PRAMEF35P-201ENST00000458709 FDX1P10109 184 aa13.38□□□□□ -0.27
PRAMEF35P-201ENST00000458709 IKQ13123 557 aaPredicted RBP13.38□□□□□ -0.27
PRAMEF35P-201ENST00000458709 NBPF20Q3BBV1 942 aa13.38□□□□□ -0.27
PRAMEF35P-201ENST00000458709 TKFCQ3LXA3 575 aa13.38□□□□□ -0.27
PRAMEF35P-201ENST00000458709 NSMFQ6X4W1 530 aa13.38□□□□□ -0.27
PRAMEF35P-201ENST00000458709 RASGRP2Q7LDG7 609 aa13.38□□□□□ -0.27
PRAMEF35P-201ENST00000458709 FAM178BQ8IXR5 827 aa13.38□□□□□ -0.27
PRAMEF35P-201ENST00000458709 MTG1Q9BT17 334 aaPredicted RBP13.38□□□□□ -0.27
PRAMEF35P-201ENST00000458709 PPP4R2Q9NY27 417 aa13.38□□□□□ -0.27
PRAMEF35P-201ENST00000458709 MTUS1Q9ULD2 1270 aa13.38□□□□□ -0.27
PRAMEF35P-201ENST00000458709 SYNPO2Q9UMS6 1093 aa13.38□□□□□ -0.27
PRAMEF35P-201ENST00000458709 MYH7P12883 1935 aa13.38□□□□□ -0.27
PRAMEF35P-201ENST00000458709 PLIN4Q96Q06 1357 aa13.37□□□□□ -0.27
PRAMEF35P-201ENST00000458709 BAIAP3O94812 1187 aa13.37□□□□□ -0.27
PRAMEF35P-201ENST00000458709 IL9P15248 144 aa13.37□□□□□ -0.27
PRAMEF35P-201ENST00000458709 KCNA5P22460 613 aa13.37□□□□□ -0.27
PRAMEF35P-201ENST00000458709 SSTR3P32745 418 aaPredicted RBP13.37□□□□□ -0.27
PRAMEF35P-201ENST00000458709 KCNJ6P48051 423 aa13.37□□□□□ -0.27
PRAMEF35P-201ENST00000458709 CPT1AP50416 773 aa13.37□□□□□ -0.27
PRAMEF35P-201ENST00000458709 WDR5P61964 334 aaKnown RBP13.37□□□□□ -0.27
PRAMEF35P-201ENST00000458709 DEFB103AP81534 67 aa13.37□□□□□ -0.27
PRAMEF35P-201ENST00000458709 CENPQQ7L2Z9 268 aaPredicted RBP13.37□□□□□ -0.27
PRAMEF35P-201ENST00000458709 FAM160B2Q86V87 743 aa13.37□□□□□ -0.27
PRAMEF35P-201ENST00000458709 ZNF444Q8N0Y2 327 aaPredicted RBP13.37□□□□□ -0.27
PRAMEF35P-201ENST00000458709 RETREG2Q8NC44 543 aa13.37□□□□□ -0.27
PRAMEF35P-201ENST00000458709 OR6J1Q8NGC5 347 aa13.37□□□□□ -0.27
PRAMEF35P-201ENST00000458709 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.37□□□□□ -0.27
PRAMEF35P-201ENST00000458709 MORC4Q8TE76 937 aa13.37□□□□□ -0.27
PRAMEF35P-201ENST00000458709 WDR11Q9BZH6 1224 aa13.37□□□□□ -0.27
PRAMEF35P-201ENST00000458709 BRWD1Q9NSI6 2320 aa13.37□□□□□ -0.27
PRAMEF35P-201ENST00000458709 SALL3Q9BXA9 1300 aa13.37□□□□□ -0.27
PRAMEF35P-201ENST00000458709 SCN10AQ9Y5Y9 1956 aa13.36□□□□□ -0.27
PRAMEF35P-201ENST00000458709 TET1Q8NFU7 2136 aa13.36□□□□□ -0.27
PRAMEF35P-201ENST00000458709 MCCP23508 829 aa13.36□□□□□ -0.27
PRAMEF35P-201ENST00000458709 SLC1A4P43007 532 aa13.36□□□□□ -0.27
PRAMEF35P-201ENST00000458709 NHLH1Q02575 133 aa13.36□□□□□ -0.27
PRAMEF35P-201ENST00000458709 NUCB1Q02818 461 aa13.36□□□□□ -0.27
PRAMEF35P-201ENST00000458709 LEXMQ3ZCV2 418 aa13.36□□□□□ -0.27
PRAMEF35P-201ENST00000458709 ZSCAN25Q6NSZ9 544 aa13.36□□□□□ -0.27
PRAMEF35P-201ENST00000458709 GIMAP6Q6P9H5 292 aa13.36□□□□□ -0.27
PRAMEF35P-201ENST00000458709 KCTD1Q719H9 257 aa13.36□□□□□ -0.27
PRAMEF35P-201ENST00000458709 CHURC1Q8WUH1 139 aa13.36□□□□□ -0.27
PRAMEF35P-201ENST00000458709 STAG1Q8WVM7 1258 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms