RNA–Protein interactions for RNA: ENST00000451744.1

LINC00458-203, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best)

Gene LINC00458, Length 1,020 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-203ENST00000451744 LRRC10BA6NIK2 292 aa7.96□□□□□ -1.14
LINC00458-203ENST00000451744 SCAMP3O14828 347 aaKnown RBP7.96□□□□□ -1.14
LINC00458-203ENST00000451744 NME2P22392 152 aa7.96□□□□□ -1.14
LINC00458-203ENST00000451744 MESP2Q0VG99 397 aa7.96□□□□□ -1.14
LINC00458-203ENST00000451744 DSC3Q14574 896 aa7.96□□□□□ -1.14
LINC00458-203ENST00000451744 SF3A1Q15459 793 aaKnown RBP7.96□□□□□ -1.14
LINC00458-203ENST00000451744 PPM1JQ5JR12 505 aa7.96□□□□□ -1.14
LINC00458-203ENST00000451744 ZSWIM9Q86XI8 627 aa7.96□□□□□ -1.14
LINC00458-203ENST00000451744 SPACA3Q8IXA5 215 aa7.96□□□□□ -1.14
LINC00458-203ENST00000451744 ZNF496Q96IT1 587 aaPredicted RBP7.96□□□□□ -1.14
LINC00458-203ENST00000451744 CBX8Q9HC52 389 aa7.96□□□□□ -1.14
LINC00458-203ENST00000451744 SPON1Q9HCB6 807 aa7.96□□□□□ -1.14
LINC00458-203ENST00000451744 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.96□□□□□ -1.14
LINC00458-203ENST00000451744 SRP68Q9UHB9 627 aaKnown RBP7.96□□□□□ -1.14
LINC00458-203ENST00000451744 GTF2IRD1Q9UHL9 959 aa7.96□□□□□ -1.14
LINC00458-203ENST00000451744 BRCA1P38398 1863 aaKnown RBP7.96□□□□□ -1.14
LINC00458-203ENST00000451744 CACNA1SQ13698 1873 aa7.96□□□□□ -1.14
LINC00458-203ENST00000451744 LDHBP07195 334 aaKnown RBP7.95□□□□□ -1.14
LINC00458-203ENST00000451744 CRKLP46109 303 aaKnown RBP7.95□□□□□ -1.14
LINC00458-203ENST00000451744 ATP2B2Q01814 1243 aa7.95□□□□□ -1.14
LINC00458-203ENST00000451744 ZP2Q05996 745 aa7.95□□□□□ -1.14
LINC00458-203ENST00000451744 ZNF252P-AS1Q0IIN9 211 aa7.95□□□□□ -1.14
LINC00458-203ENST00000451744 NFE2L2Q16236 605 aa7.95□□□□□ -1.14
LINC00458-203ENST00000451744 FBLN7Q53RD9 439 aa7.95□□□□□ -1.14
LINC00458-203ENST00000451744 NXPE4Q6UWF7 544 aa7.95□□□□□ -1.14
LINC00458-203ENST00000451744 UBE3DQ7Z6J8 389 aa7.95□□□□□ -1.14
LINC00458-203ENST00000451744 ASB11Q8WXH4 323 aa7.95□□□□□ -1.14
LINC00458-203ENST00000451744 EMILIN2Q9BXX0 1053 aa7.95□□□□□ -1.14
LINC00458-203ENST00000451744 MTFR1LQ9H019 292 aa7.95□□□□□ -1.14
LINC00458-203ENST00000451744 PRDM10Q9NQV6 1147 aa7.95□□□□□ -1.14
LINC00458-203ENST00000451744 ZBTB1Q9Y2K1 713 aa7.95□□□□□ -1.14
LINC00458-203ENST00000451744 ANKRD31Q8N7Z5 1873 aa7.95□□□□□ -1.14
LINC00458-203ENST00000451744 CNTNAP4Q9C0A0 1308 aa7.95□□□□□ -1.14
LINC00458-203ENST00000451744 CYP19A1P11511 503 aaPredicted RBP7.94□□□□□ -1.14
LINC00458-203ENST00000451744 NTF4P34130 210 aa7.94□□□□□ -1.14
LINC00458-203ENST00000451744 TEFQ10587 303 aa7.94□□□□□ -1.14
LINC00458-203ENST00000451744 KCNMB1Q16558 191 aa7.94□□□□□ -1.14
LINC00458-203ENST00000451744 NLGN2Q8NFZ4 835 aa7.94□□□□□ -1.14
LINC00458-203ENST00000451744 FAM84AQ96KN4 292 aa7.94□□□□□ -1.14
LINC00458-203ENST00000451744 BACH2Q9BYV9 841 aa7.94□□□□□ -1.14
LINC00458-203ENST00000451744 MRS2Q9HD23 443 aa7.94□□□□□ -1.14
LINC00458-203ENST00000451744 WWC3Q9ULE0 1092 aa7.94□□□□□ -1.14
LINC00458-203ENST00000451744 COL11A2P13942 1736 aaPredicted RBP7.94□□□□□ -1.14
LINC00458-203ENST00000451744 HEG1Q9ULI3 1381 aa7.94□□□□□ -1.14
LINC00458-203ENST00000451744 NUP98P52948 1817 aa7.94□□□□□ -1.14
LINC00458-203ENST00000451744 ZNF503-AS2A6NEH8 195 aa7.93□□□□□ -1.14
LINC00458-203ENST00000451744 DCDC2CA8MYV0 355 aa7.93□□□□□ -1.14
LINC00458-203ENST00000451744 IGF2BP3O00425 579 aaKnown RBP eCLIP7.93□□□□□ -1.14
LINC00458-203ENST00000451744 ERCC5P28715 1186 aaPredicted RBP7.93□□□□□ -1.14
LINC00458-203ENST00000451744 TMPOP42166 694 aaKnown RBP7.93□□□□□ -1.14
LINC00458-203ENST00000451744 PLCB3Q01970 1234 aa7.93□□□□□ -1.14
LINC00458-203ENST00000451744 MLANAQ16655 118 aa7.93□□□□□ -1.14
LINC00458-203ENST00000451744 NKPD1Q17RQ9 610 aa7.93□□□□□ -1.14
LINC00458-203ENST00000451744 KRT24Q2M2I5 525 aa7.93□□□□□ -1.14
LINC00458-203ENST00000451744 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.93□□□□□ -1.14
LINC00458-203ENST00000451744 ZNF790Q6PG37 636 aa7.93□□□□□ -1.14
LINC00458-203ENST00000451744 GRIN3AQ8TCU5 1115 aa7.93□□□□□ -1.14
LINC00458-203ENST00000451744 PICK1Q9NRD5 415 aa7.93□□□□□ -1.14
LINC00458-203ENST00000451744 CACNA2D2Q9NY47 1150 aa7.93□□□□□ -1.14
LINC00458-203ENST00000451744 PPP1R1BQ9UD71 204 aaPredicted RBP7.93□□□□□ -1.14
LINC00458-203ENST00000451744 SOS1Q07889 1333 aaPredicted RBP7.93□□□□□ -1.14
LINC00458-203ENST00000451744 MAPK8IP3Q9UPT6 1336 aa7.93□□□□□ -1.14
LINC00458-203ENST00000451744 CHD4Q14839 1912 aa7.93□□□□□ -1.14
LINC00458-203ENST00000451744 A1BGP04217 495 aa7.92□□□□□ -1.14
LINC00458-203ENST00000451744 MAPK8P45983 427 aa7.92□□□□□ -1.14
LINC00458-203ENST00000451744 RIPK4P57078 832 aa7.92□□□□□ -1.14
LINC00458-203ENST00000451744 WDR43Q15061 677 aaKnown RBP eCLIP7.92□□□□□ -1.14
LINC00458-203ENST00000451744 NAALADL2Q58DX5 795 aa7.92□□□□□ -1.14
LINC00458-203ENST00000451744 TMC4Q7Z404 712 aa7.92□□□□□ -1.14
LINC00458-203ENST00000451744 C12orf40Q86WS4 652 aa7.92□□□□□ -1.14
LINC00458-203ENST00000451744 CTNND2Q9UQB3 1225 aa7.92□□□□□ -1.14
LINC00458-203ENST00000451744 COL15A1P39059 1388 aa7.92□□□□□ -1.14
LINC00458-203ENST00000451744 NRXN2Q9P2S2 1712 aa7.92□□□□□ -1.14
LINC00458-203ENST00000451744 RPS6KA4O75676 772 aa7.91□□□□□ -1.14
LINC00458-203ENST00000451744 GYS1P13807 737 aa7.91□□□□□ -1.14
LINC00458-203ENST00000451744 CANXP27824 592 aaKnown RBP7.91□□□□□ -1.14
LINC00458-203ENST00000451744 DDR1Q08345 913 aa7.91□□□□□ -1.14
LINC00458-203ENST00000451744 TPTE2Q6XPS3 522 aa7.91□□□□□ -1.14
LINC00458-203ENST00000451744 TTC5Q8N0Z6 440 aa7.91□□□□□ -1.14
LINC00458-203ENST00000451744 C3orf58Q8NDZ4 430 aa7.91□□□□□ -1.14
LINC00458-203ENST00000451744 RTF1Q92541 710 aaKnown RBP7.91□□□□□ -1.14
LINC00458-203ENST00000451744 UBXN4Q92575 508 aa7.91□□□□□ -1.14
LINC00458-203ENST00000451744 NECAB3Q96P71 396 aaPredicted RBP7.91□□□□□ -1.14
LINC00458-203ENST00000451744 METTL5Q9NRN9 209 aaKnown RBP7.91□□□□□ -1.14
LINC00458-203ENST00000451744 PARP2Q9UGN5 583 aa7.91□□□□□ -1.14
LINC00458-203ENST00000451744 USP16Q9Y5T5 823 aa7.91□□□□□ -1.14
LINC00458-203ENST00000451744 DLEC1Q9Y238 1755 aa7.91□□□□□ -1.14
LINC00458-203ENST00000451744 TNRC6CQ9HCJ0 1690 aaKnown RBP7.9□□□□□ -1.14
LINC00458-203ENST00000451744 CARMIL3Q8ND23 1372 aa7.9□□□□□ -1.14
LINC00458-203ENST00000451744 PITPNM2Q9BZ72 1349 aa7.9□□□□□ -1.14
LINC00458-203ENST00000451744 USP42Q9H9J4 1324 aaKnown RBP7.9□□□□□ -1.14
LINC00458-203ENST00000451744 PNMA6FA0A0J9YX94 578 aa7.9□□□□□ -1.14
LINC00458-203ENST00000451744 APAF1O14727 1248 aa7.9□□□□□ -1.14
LINC00458-203ENST00000451744 SORBS3O60504 671 aa7.9□□□□□ -1.14
LINC00458-203ENST00000451744 MMP10P09238 476 aa7.9□□□□□ -1.14
LINC00458-203ENST00000451744 HMGB1P09429 215 aaKnown RBP7.9□□□□□ -1.14
LINC00458-203ENST00000451744 HDLBPQ00341 1268 aaKnown RBP7.9□□□□□ -1.14
LINC00458-203ENST00000451744 FYB2Q5VWT5 728 aa7.9□□□□□ -1.14
LINC00458-203ENST00000451744 PNISRQ8TF01 805 aaKnown RBP7.9□□□□□ -1.14
LINC00458-203ENST00000451744 RUNDC1Q96C34 613 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms