RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 TNNI2P48788 182 aa18.16■□□□□ 0.5
AP000253.1-201ENST00000449339 RASA3Q14644 834 aa18.16■□□□□ 0.5
AP000253.1-201ENST00000449339 TBC1D10BQ4KMP7 808 aaPredicted RBP18.16■□□□□ 0.5
AP000253.1-201ENST00000449339 PCDHA1Q9Y5I3 950 aa18.16■□□□□ 0.5
AP000253.1-201ENST00000449339 SYNRGQ9UMZ2 1314 aa18.16■□□□□ 0.5
AP000253.1-201ENST00000449339 NAALADL2Q58DX5 795 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 SPATA1Q5VX52 437 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 RRAGBQ5VZM2 374 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 POTEDQ86YR6 584 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 MYRIPQ8NFW9 859 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 CUL5Q93034 780 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 CCSER1Q9C0I3 900 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 PSTPIP2Q9H939 334 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 MYH7BA7E2Y1 1941 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 SMCHD1A6NHR9 2005 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 USP17L15C9J2P7 530 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 USP17L13C9JLJ4 530 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 USP17L11C9JVI0 530 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 USP17L18D6R9N7 530 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 USP17L22D6RA61 530 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 USP17L17D6RBQ6 530 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 USP17L19D6RCP7 530 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 USP17L20D6RJB6 530 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 TDP2O95551 362 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 CLK2P49760 499 aaKnown RBP18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 USP17L24Q0WX57 530 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 ZYXQ15942 572 aaKnown RBP18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 SYDE2Q5VT97 1194 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 USP17L6PQ6QN14 398 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 AK8Q96MA6 479 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 GLIS2Q9BZE0 524 aaPredicted RBP18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 ARHGEF10LQ9HCE6 1279 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 ZNF541Q9H0D2 1346 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 LTBP3Q9NS15 1303 aa18.15■□□□□ 0.5
AP000253.1-201ENST00000449339 USP27XA6NNY8 438 aa18.14■□□□□ 0.49
AP000253.1-201ENST00000449339 FZD9O00144 591 aa18.14■□□□□ 0.49
AP000253.1-201ENST00000449339 SLC37A4O43826 429 aa18.14■□□□□ 0.49
AP000253.1-201ENST00000449339 TBC1D12O60347 775 aa18.14■□□□□ 0.49
AP000253.1-201ENST00000449339 STX17P56962 302 aa18.14■□□□□ 0.49
AP000253.1-201ENST00000449339 ORC2Q13416 577 aaPredicted RBP18.14■□□□□ 0.49
AP000253.1-201ENST00000449339 PLIN2Q99541 437 aa18.14■□□□□ 0.49
AP000253.1-201ENST00000449339 CNOT7Q9UIV1 285 aaKnown RBP18.14■□□□□ 0.49
AP000253.1-201ENST00000449339 NRDCO43847 1150 aa18.14■□□□□ 0.49
AP000253.1-201ENST00000449339 RPS12P25398 132 aaKnown RBP18.14■□□□□ 0.49
AP000253.1-201ENST00000449339 CAP2P40123 477 aa18.14■□□□□ 0.49
AP000253.1-201ENST00000449339 PTPN21Q16825 1174 aa18.14■□□□□ 0.49
AP000253.1-201ENST00000449339 USH1GQ495M9 461 aa18.14■□□□□ 0.49
AP000253.1-201ENST00000449339 RMND1Q9NWS8 449 aa18.14■□□□□ 0.49
AP000253.1-201ENST00000449339 TMX2Q9Y320 296 aa18.14■□□□□ 0.49
AP000253.1-201ENST00000449339 RPN1P04843 607 aaKnown RBP18.13■□□□□ 0.49
AP000253.1-201ENST00000449339 TNNT1P13805 278 aa18.13■□□□□ 0.49
AP000253.1-201ENST00000449339 MRPL12P52815 198 aaKnown RBP18.13■□□□□ 0.49
AP000253.1-201ENST00000449339 FAM83BQ5T0W9 1011 aa18.13■□□□□ 0.49
AP000253.1-201ENST00000449339 TEPSINQ96N21 525 aa18.13■□□□□ 0.49
AP000253.1-201ENST00000449339 KCND1Q9NSA2 647 aa18.13■□□□□ 0.49
AP000253.1-201ENST00000449339 CCAR2Q8N163 923 aaKnown RBP18.13■□□□□ 0.49
AP000253.1-201ENST00000449339 TECP42680 631 aa18.12■□□□□ 0.49
AP000253.1-201ENST00000449339 ZNF658Q5TYW1 1059 aaPredicted RBP18.12■□□□□ 0.49
AP000253.1-201ENST00000449339 LRRC15Q8TF66 581 aa18.12■□□□□ 0.49
AP000253.1-201ENST00000449339 PRR12Q9ULL5 1215 aa18.12■□□□□ 0.49
AP000253.1-201ENST00000449339 ATAD5Q96QE3 1844 aa18.12■□□□□ 0.49
AP000253.1-201ENST00000449339 TXKP42681 527 aa18.11■□□□□ 0.49
AP000253.1-201ENST00000449339 CDKAL1Q5VV42 579 aa18.11■□□□□ 0.49
AP000253.1-201ENST00000449339 BTNL9Q6UXG8 535 aa18.11■□□□□ 0.49
AP000253.1-201ENST00000449339 CABP7Q86V35 215 aa18.11■□□□□ 0.49
AP000253.1-201ENST00000449339 FBXO11Q86XK2 927 aa18.11■□□□□ 0.49
AP000253.1-201ENST00000449339 KBTBD4Q9NVX7 518 aa18.11■□□□□ 0.49
AP000253.1-201ENST00000449339 TRMT1Q9NXH9 659 aaKnown RBP18.11■□□□□ 0.49
AP000253.1-201ENST00000449339 HACL1Q9UJ83 578 aa18.11■□□□□ 0.49
AP000253.1-201ENST00000449339 CTNND2Q9UQB3 1225 aa18.11■□□□□ 0.49
AP000253.1-201ENST00000449339 A0A1B0GTH6 734 aa18.11■□□□□ 0.49
AP000253.1-201ENST00000449339 DYNC1I1O14576 645 aa18.11■□□□□ 0.49
AP000253.1-201ENST00000449339 MYL1P05976 194 aa18.11■□□□□ 0.49
AP000253.1-201ENST00000449339 KCNJ6P48051 423 aa18.11■□□□□ 0.49
AP000253.1-201ENST00000449339 MAP3K10Q02779 954 aa18.11■□□□□ 0.49
AP000253.1-201ENST00000449339 CALCRLQ16602 461 aa18.11■□□□□ 0.49
AP000253.1-201ENST00000449339 SPECC1LQ69YQ0 1117 aa18.11■□□□□ 0.49
AP000253.1-201ENST00000449339 SAMD1Q6SPF0 538 aaPredicted RBP18.11■□□□□ 0.49
AP000253.1-201ENST00000449339 AMNQ9BXJ7 453 aa18.11■□□□□ 0.49
AP000253.1-201ENST00000449339 GOPCQ9HD26 462 aa18.11■□□□□ 0.49
AP000253.1-201ENST00000449339 PHF20L1A8MW92 1017 aa18.1■□□□□ 0.49
AP000253.1-201ENST00000449339 PLCG1P19174 1290 aa18.1■□□□□ 0.49
AP000253.1-201ENST00000449339 NR1I3Q14994 352 aa18.1■□□□□ 0.49
AP000253.1-201ENST00000449339 E4F1Q66K89 784 aaPredicted RBP18.1■□□□□ 0.49
AP000253.1-201ENST00000449339 NYAP1Q6ZVC0 841 aa18.1■□□□□ 0.49
AP000253.1-201ENST00000449339 APTXQ7Z2E3 356 aaKnown RBP18.1■□□□□ 0.49
AP000253.1-201ENST00000449339 IGSF22Q8N9C0 903 aa18.1■□□□□ 0.49
AP000253.1-201ENST00000449339 CCDC112Q8NEF3 446 aa18.1■□□□□ 0.49
AP000253.1-201ENST00000449339 GJA10Q969M2 543 aa18.1■□□□□ 0.49
AP000253.1-201ENST00000449339 MTMR9Q96QG7 549 aa18.1■□□□□ 0.49
AP000253.1-201ENST00000449339 UIMC1Q96RL1 719 aa18.1■□□□□ 0.49
AP000253.1-201ENST00000449339 P2RX7Q99572 595 aaKnown RBP18.1■□□□□ 0.49
AP000253.1-201ENST00000449339 CUEDC2Q9H467 287 aa18.1■□□□□ 0.49
AP000253.1-201ENST00000449339 RWDD2AQ9UIY3 292 aa18.1■□□□□ 0.49
AP000253.1-201ENST00000449339 MEIS2O14770 477 aa18.1■□□□□ 0.49
AP000253.1-201ENST00000449339 STAT2P52630 851 aa18.1■□□□□ 0.49
AP000253.1-201ENST00000449339 PAK1Q13153 545 aa18.1■□□□□ 0.49
AP000253.1-201ENST00000449339 TBX2Q13207 712 aaPredicted RBP18.1■□□□□ 0.49
AP000253.1-201ENST00000449339 KIF4BQ2VIQ3 1234 aa18.1■□□□□ 0.49
AP000253.1-201ENST00000449339 SYNPO2Q9UMS6 1093 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms