RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 A1CFQ9NQ94 594 aaKnown RBP8.67□□□□□ -1.02
SF3A3P1-201ENST00000446317 PKD2L1Q9P0L9 805 aa8.67□□□□□ -1.02
SF3A3P1-201ENST00000446317 PCDHA6Q9UN73 950 aa8.67□□□□□ -1.02
SF3A3P1-201ENST00000446317 MRPL11Q9Y3B7 192 aaKnown RBP8.67□□□□□ -1.02
SF3A3P1-201ENST00000446317 RABGAP1Q9Y3P9 1069 aa8.67□□□□□ -1.02
SF3A3P1-201ENST00000446317 PCDHA8Q9Y5H6 950 aa8.67□□□□□ -1.02
SF3A3P1-201ENST00000446317 MRVI1Q9Y6F6 885 aa8.67□□□□□ -1.02
SF3A3P1-201ENST00000446317 A0A0G2JMZ2 1700 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 GCOM1H8Y6P7 765 aaPredicted RBP8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 TLR2O60603 784 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 POLR2MP0CAP2 368 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 BCRP11274 1271 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 NCLP19338 710 aaKnown RBP8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 CYP2B6P20813 491 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 SMARCA1P28370 1054 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 INHBEP58166 350 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 RPS6P62753 249 aaKnown RBP8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 RESTQ13127 1097 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 INF2Q27J81 1249 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 RNF207Q6ZRF8 634 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 EEPD1Q7L9B9 569 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 RIOX2Q8IUF8 465 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 DNAJC5GQ8N7S2 189 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 FBXO18Q8NFZ0 1043 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 CUL5Q93034 780 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 ACAD9Q9H845 621 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 GDPD2Q9HCC8 539 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 C6orf50Q9HD87 102 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 RIC8AQ9NPQ8 531 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 RTEL1Q9NZ71 1219 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 TFIP11Q9UBB9 837 aaKnown RBP8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 PCDHA4Q9UN74 947 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 GABRQQ9UN88 632 aa8.66□□□□□ -1.02
SF3A3P1-201ENST00000446317 SMCHD1A6NHR9 2005 aa8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 MEIS2O14770 477 aa8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 TNPO2O14787 897 aaKnown RBP8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 ZSCAN22P10073 491 aaPredicted RBP8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 XBP1P17861 261 aa8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 ADORA2AP29274 412 aa8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 MAP2K2P36507 400 aa8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 PSMC4P43686 418 aa8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 GCLCP48506 637 aaPredicted RBP8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 SAFBQ15424 915 aaKnown RBP eCLIP8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 CCL14Q16627 93 aa8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 GPR142Q7Z601 462 aa8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 REXO1Q8N1G1 1221 aaKnown RBP8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 MB21D1Q8N884 522 aa8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 CCDC148Q8NFR7 591 aa8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 SYTL5Q8TDW5 730 aaPredicted RBP8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 TRIM47Q96LD4 638 aa8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 BEGAINQ9BUH8 593 aa8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 CYP39A1Q9NYL5 469 aa8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 SLC45A1Q9Y2W3 748 aa8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 ASTN1O14525 1302 aa8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 MYPNQ86TC9 1320 aa8.65□□□□□ -1.02
SF3A3P1-201ENST00000446317 MYH6P13533 1939 aa8.65□□□□□ -1.03
SF3A3P1-201ENST00000446317 CCDC194A0A1B0GVG4 234 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 SOWAHBA6NEL2 793 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 POTEB2H3BUK9 544 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 COBLO75128 1261 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 F13A1P00488 732 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 DDIT3P35638 169 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 KCTD2Q14681 263 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 ZNF174Q15697 407 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 FAM110CQ1W6H9 321 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 LETM2Q2VYF4 491 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 ARHGEF16Q5VV41 709 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 PLEKHH3Q7Z736 793 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 NPLOC4Q8TAT6 608 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 TBCKQ8TEA7 893 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 ZNF296Q8WUU4 475 aaPredicted RBP8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 ANO3Q9BYT9 981 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 ZMYND12Q9H0C1 365 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 RBM27Q9P2N5 1060 aaKnown RBP8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 MORF4L1Q9UBU8 362 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 KIF3AQ9Y496 699 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 SPDYE3A6NKU9 549 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 GPR25O00155 361 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 FOXN1O15353 648 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 TDP2O95551 362 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 FCER1AP12319 257 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 MCM7P33993 719 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 MRPL12P52815 198 aaKnown RBP8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 OAZ1P54368 228 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 CCNA1P78396 465 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 LACTBP83111 547 aaPredicted RBP8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 SP3Q02447 781 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 DNM1Q05193 864 aaKnown RBP8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 PRKCZQ05513 592 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 TRIM32Q13049 653 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 PRAMEF19Q5SWL8 479 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 TMEM63BQ5T3F8 832 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 DPP9Q86TI2 863 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 CYP2W1Q8TAV3 490 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 CCDC12Q8WUD4 166 aaPredicted RBP8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 TNFRSF25Q93038 417 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 RMDN3Q96TC7 470 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 BRMS1Q9HCU9 246 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 SH3GLB2Q9NR46 395 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 FLRT1Q9NZU1 646 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms