RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 PITPNM3Q9BZ71 974 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 BCAP29Q9UHQ4 241 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 ARL2BPQ9Y2Y0 163 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 ATF2P15336 505 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 ANKZF1Q9H8Y5 726 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 LDHAL6AQ6ZMR3 332 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 STAMBPL1Q96FJ0 436 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 VPS54Q9P1Q0 977 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 RAD9BQ6WBX8 426 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 XAGE2Q96GT9 111 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 FGAP02671 866 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 KIF11P52732 1056 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 DR1Q01658 176 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 TRPM8Q7Z2W7 1104 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 ARL8AQ96BM9 186 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 H0Y3Z8 333 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 FSBPO95073 299 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 NR1H3Q13133 447 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 BRWD1Q9NSI6 2320 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 ESRRGP62508 458 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 DPF2Q92785 391 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 CRNKL1Q9BZJ0 848 aaKnown RBP8.59□□□□□ -1.03
SMG1-202ENST00000446231 ZBTB3Q9H5J0 574 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 AP1G2O75843 785 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 ARHGAP10A1A4S6 786 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 MSANTD4Q8NCY6 345 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 ZKSCAN4Q969J2 545 aaPredicted RBP8.59□□□□□ -1.03
SMG1-202ENST00000446231 ANP32DO95626 131 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 IRX4P78413 519 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 ITIH3Q06033 890 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 RIC8AQ9NPQ8 531 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 LIN9Q5TKA1 542 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 OLFM3Q96PB7 478 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 CPP00450 1065 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 SERPING1P05155 500 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 SEC24CP53992 1094 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 PTGDRQ13258 359 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 C16orf87Q6PH81 154 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 ETNK1Q9HBU6 452 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 SNX12Q9UMY4 172 aa8.59□□□□□ -1.03
SMG1-202ENST00000446231 MAK16Q9BXY0 300 aaKnown RBP8.59□□□□□ -1.03
SMG1-202ENST00000446231 VPS41P49754 854 aa8.59□□□□□ -1.04
SMG1-202ENST00000446231 ZNF653Q96CK0 615 aa8.59□□□□□ -1.04
SMG1-202ENST00000446231 HIC2Q96JB3 615 aa8.59□□□□□ -1.04
SMG1-202ENST00000446231 NECTIN1Q15223 517 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 HS2ST1Q7LGA3 356 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 ARHGAP22Q7Z5H3 698 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 MAP7D3Q8IWC1 876 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 PPP4R1Q8TF05 950 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 RILPQ96NA2 401 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 TRPA1O75762 1119 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 PDE6BP35913 854 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 NT5C3AQ9H0P0 336 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 NDE1Q9NXR1 346 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 FBXL5Q9UKA1 691 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 EEF2KMTQ96G04 330 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 FGGP02679 453 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 LETM2Q2VYF4 491 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 KDM7AQ6ZMT4 941 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 GPHNQ9NQX3 736 aaPredicted RBP8.58□□□□□ -1.04
SMG1-202ENST00000446231 DLGAP2Q9P1A6 1054 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 CALCRLQ16602 461 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 AGGF1Q8N302 714 aaeCLIP8.58□□□□□ -1.044e-6■□□□□ 8.7
SMG1-202ENST00000446231 CEP70Q8NHQ1 597 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 CCNT1O60563 726 aaKnown RBP8.58□□□□□ -1.04
SMG1-202ENST00000446231 WDR93Q6P2C0 686 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 OTUD6AQ7L8S5 288 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 BBOF1Q8ND07 529 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 KIFAP3Q92845 792 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 SPZ1Q9BXG8 430 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 RP1P56715 2156 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 ACSL3O95573 720 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 ADCY2Q08462 1091 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 MLXIPLQ9NP71 852 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 SNX24Q9Y343 169 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.58□□□□□ -1.04
SMG1-202ENST00000446231 PTPREP23469 700 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 TC2NQ8N9U0 490 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 MYCBPAPQ8TBZ2 947 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 MS4A14Q96JA4 679 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 ZMYM1Q5SVZ6 1142 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 ZNF658Q5TYW1 1059 aaPredicted RBP8.58□□□□□ -1.04
SMG1-202ENST00000446231 KIRREL3Q8IZU9 778 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 FMO2Q99518 471 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 DRC3Q9H069 523 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 POLD4Q9HCU8 107 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 UBN2Q6ZU65 1347 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 SART1O43290 800 aaKnown RBP8.58□□□□□ -1.04
SMG1-202ENST00000446231 FMR1Q06787 632 aaKnown RBP eCLIP8.58□□□□□ -1.042e-6■■□□□ 12.9
SMG1-202ENST00000446231 CUEDC2Q9H467 287 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 ZNF185O15231 689 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 SPAG7O75391 227 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 REXO1L1PQ8IX06 675 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 MYOCDQ8IZQ8 938 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 SLC4A7Q9Y6M7 1214 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 WDR7Q9Y4E6 1490 aa8.58□□□□□ -1.04
SMG1-202ENST00000446231 ZNF513Q8N8E2 541 aaPredicted RBP8.58□□□□□ -1.04
SMG1-202ENST00000446231 CAPN11Q9UMQ6 739 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 ZNF518AQ6AHZ1 1483 aa8.57□□□□□ -1.04
SMG1-202ENST00000446231 M0R2C6 588 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms