RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-213ENST00000440293 DHX32Q7L7V1 743 aaKnown RBP21.05■□□□□ 0.96
HDAC7-213ENST00000440293 PCSK9Q8NBP7 692 aaKnown RBP21.05■□□□□ 0.96
HDAC7-213ENST00000440293 USP26Q9BXU7 913 aa21.05■□□□□ 0.96
HDAC7-213ENST00000440293 LY9Q9HBG7 655 aa21.05■□□□□ 0.96
HDAC7-213ENST00000440293 ZNFX1Q9P2E3 1918 aaKnown RBP21.04■□□□□ 0.96
HDAC7-213ENST00000440293 SH2B2O14492 632 aaPredicted RBP21.04■□□□□ 0.96
HDAC7-213ENST00000440293 PQBP1O60828 265 aaKnown RBP21.04■□□□□ 0.96
HDAC7-213ENST00000440293 SNAI1O95863 264 aaPredicted RBP21.04■□□□□ 0.96
HDAC7-213ENST00000440293 ALAS1P13196 640 aa21.04■□□□□ 0.96
HDAC7-213ENST00000440293 LIFRP42702 1097 aa21.04■□□□□ 0.96
HDAC7-213ENST00000440293 EXOSC10Q01780 885 aaKnown RBP21.04■□□□□ 0.96
HDAC7-213ENST00000440293 ADCK5Q3MIX3 580 aa21.04■□□□□ 0.96
HDAC7-213ENST00000440293 NFXL1Q6ZNB6 911 aa21.04■□□□□ 0.96
HDAC7-213ENST00000440293 TRERF1Q96PN7 1200 aa21.04■□□□□ 0.96
HDAC7-213ENST00000440293 ABHD16BQ9H3Z7 469 aa21.04■□□□□ 0.96
HDAC7-213ENST00000440293 SPC25Q9HBM1 224 aa21.04■□□□□ 0.96
HDAC7-213ENST00000440293 GPHNQ9NQX3 736 aaPredicted RBP21.04■□□□□ 0.96
HDAC7-213ENST00000440293 CCPG1Q9ULG6 757 aa21.04■□□□□ 0.96
HDAC7-213ENST00000440293 SYNRGQ9UMZ2 1314 aa21.04■□□□□ 0.96
HDAC7-213ENST00000440293 PALM3A6NDB9 673 aaPredicted RBP21.03■□□□□ 0.96
HDAC7-213ENST00000440293 KLRF2D3W0D1 207 aa21.03■□□□□ 0.96
HDAC7-213ENST00000440293 EIF5BO60841 1220 aaKnown RBP21.03■□□□□ 0.96
HDAC7-213ENST00000440293 TIMP1P01033 207 aa21.03■□□□□ 0.96
HDAC7-213ENST00000440293 NKX3-2P78367 333 aa21.03■□□□□ 0.96
HDAC7-213ENST00000440293 TROAPQ12815 778 aa21.03■□□□□ 0.96
HDAC7-213ENST00000440293 COL9A3Q14050 684 aaPredicted RBP21.03■□□□□ 0.96
HDAC7-213ENST00000440293 GRM4Q14833 912 aa21.03■□□□□ 0.96
HDAC7-213ENST00000440293 ADGRF4Q8IZF3 695 aa21.03■□□□□ 0.96
HDAC7-213ENST00000440293 ANKRD35Q8N283 1001 aa21.03■□□□□ 0.96
HDAC7-213ENST00000440293 STAG2Q8N3U4 1231 aa21.03■□□□□ 0.96
HDAC7-213ENST00000440293 SYMPKQ92797 1274 aaKnown RBP21.03■□□□□ 0.96
HDAC7-213ENST00000440293 GLT1D1Q96MS3 346 aa21.03■□□□□ 0.96
HDAC7-213ENST00000440293 CPVLQ9H3G5 476 aa21.03■□□□□ 0.96
HDAC7-213ENST00000440293 ACAD9Q9H845 621 aa21.03■□□□□ 0.96
HDAC7-213ENST00000440293 HOMER2Q9NSB8 354 aa21.03■□□□□ 0.96
HDAC7-213ENST00000440293 RNF146Q9NTX7 359 aa21.03■□□□□ 0.96
HDAC7-213ENST00000440293 MAD2L2Q9UI95 211 aa21.03■□□□□ 0.96
HDAC7-213ENST00000440293 SNX14Q9Y5W7 946 aa21.03■□□□□ 0.96
HDAC7-213ENST00000440293 WDR19Q8NEZ3 1342 aa21.03■□□□□ 0.96
HDAC7-213ENST00000440293 CCDC69A6NI79 296 aa21.02■□□□□ 0.96
HDAC7-213ENST00000440293 FOSL2P15408 326 aa21.02■□□□□ 0.96
HDAC7-213ENST00000440293 CDK7P50613 346 aa21.02■□□□□ 0.96
HDAC7-213ENST00000440293 ACVR2BQ13705 512 aa21.02■□□□□ 0.96
HDAC7-213ENST00000440293 KCNA10Q16322 511 aa21.02■□□□□ 0.96
HDAC7-213ENST00000440293 MFSD5Q6N075 450 aa21.02■□□□□ 0.96
HDAC7-213ENST00000440293 MYLIPQ8WY64 445 aa21.02■□□□□ 0.96
HDAC7-213ENST00000440293 MAP3K14Q99558 947 aa21.02■□□□□ 0.96
HDAC7-213ENST00000440293 LRRC2Q9BYS8 371 aa21.02■□□□□ 0.96
HDAC7-213ENST00000440293 VAT1LQ9HCJ6 419 aa21.02■□□□□ 0.96
HDAC7-213ENST00000440293 SMCHD1A6NHR9 2005 aa21.02■□□□□ 0.96
HDAC7-213ENST00000440293 DHX16O60231 1041 aaKnown RBP21.01■□□□□ 0.95
HDAC7-213ENST00000440293 PSMA5P28066 241 aa21.01■□□□□ 0.95
HDAC7-213ENST00000440293 EPHB4P54760 987 aa21.01■□□□□ 0.95
HDAC7-213ENST00000440293 GJA9P57773 515 aa21.01■□□□□ 0.95
HDAC7-213ENST00000440293 ZNF654Q8IZM8 581 aa21.01■□□□□ 0.95
HDAC7-213ENST00000440293 SEZ6LQ9BYH1 1024 aa21.01■□□□□ 0.95
HDAC7-213ENST00000440293 UPF3AQ9H1J1 476 aaKnown RBP21.01■□□□□ 0.95
HDAC7-213ENST00000440293 TBX21Q9UL17 535 aa21.01■□□□□ 0.95
HDAC7-213ENST00000440293 COL11A1P12107 1806 aaPredicted RBP21.01■□□□□ 0.95
HDAC7-213ENST00000440293 EYSQ5T1H1 3165 aa21■□□□□ 0.95
HDAC7-213ENST00000440293 DDAH1O94760 285 aa21■□□□□ 0.95
HDAC7-213ENST00000440293 PPIGQ13427 754 aaKnown RBP eCLIP21■□□□□ 0.95
HDAC7-213ENST00000440293 JAKMIP1Q96N16 626 aaKnown RBP21■□□□□ 0.95
HDAC7-213ENST00000440293 JMJD4Q9H9V9 463 aa21■□□□□ 0.95
HDAC7-213ENST00000440293 CDKN2AIPQ9NXV6 580 aaPredicted RBP21■□□□□ 0.95
HDAC7-213ENST00000440293 ZHX1Q9UKY1 873 aaPredicted RBP21■□□□□ 0.95
HDAC7-213ENST00000440293 VCANP13611 3396 aa21■□□□□ 0.95
HDAC7-213ENST00000440293 PLXNA1Q9UIW2 1896 aa20.99■□□□□ 0.95
HDAC7-213ENST00000440293 CALM1P0DP23 149 aa20.99■□□□□ 0.95
HDAC7-213ENST00000440293 CALM2P0DP24 149 aa20.99■□□□□ 0.95
HDAC7-213ENST00000440293 CALM3P0DP25 149 aa20.99■□□□□ 0.95
HDAC7-213ENST00000440293 KIF5BP33176 963 aa20.99■□□□□ 0.95
HDAC7-213ENST00000440293 CDC37Q16543 378 aaPredicted RBP20.99■□□□□ 0.95
HDAC7-213ENST00000440293 BLOC1S2Q6QNY1 142 aa20.99■□□□□ 0.95
HDAC7-213ENST00000440293 SYNE3Q6ZMZ3 975 aa20.99■□□□□ 0.95
HDAC7-213ENST00000440293 SGMS1Q86VZ5 419 aa20.99■□□□□ 0.95
HDAC7-213ENST00000440293 CTCFLQ8NI51 663 aaPredicted RBP20.99■□□□□ 0.95
HDAC7-213ENST00000440293 SLC12A7Q9Y666 1083 aa20.99■□□□□ 0.95
HDAC7-213ENST00000440293 CDH23Q9H251 3354 aa20.98■□□□□ 0.95
HDAC7-213ENST00000440293 A0A0U1RQG5 324 aaPredicted RBP20.98■□□□□ 0.95
HDAC7-213ENST00000440293 ASGR1P07306 291 aa20.98■□□□□ 0.95
HDAC7-213ENST00000440293 DNAJB2P25686 324 aa20.98■□□□□ 0.95
HDAC7-213ENST00000440293 MUM1L1Q5H9M0 696 aa20.98■□□□□ 0.95
HDAC7-213ENST00000440293 TCEANC2Q96MN5 208 aa20.98■□□□□ 0.95
HDAC7-213ENST00000440293 RIOX1Q9H6W3 641 aa20.98■□□□□ 0.95
HDAC7-213ENST00000440293 A1CFQ9NQ94 594 aaKnown RBP20.98■□□□□ 0.95
HDAC7-213ENST00000440293 ARVCFO00192 962 aa20.97■□□□□ 0.95
HDAC7-213ENST00000440293 C6orf222P0C671 652 aaPredicted RBP20.97■□□□□ 0.95
HDAC7-213ENST00000440293 GNAQP50148 359 aa20.97■□□□□ 0.95
HDAC7-213ENST00000440293 FGD1P98174 961 aa20.97■□□□□ 0.95
HDAC7-213ENST00000440293 QRICH1Q2TAL8 776 aa20.97■□□□□ 0.95
HDAC7-213ENST00000440293 CCDC144BQ3MJ40 725 aa20.97■□□□□ 0.95
HDAC7-213ENST00000440293 RASIP1Q5U651 963 aa20.97■□□□□ 0.95
HDAC7-213ENST00000440293 FBXO11Q86XK2 927 aa20.97■□□□□ 0.95
HDAC7-213ENST00000440293 TMEM199Q8N511 208 aa20.97■□□□□ 0.95
HDAC7-213ENST00000440293 LENG1Q96BZ8 264 aaPredicted RBP20.97■□□□□ 0.95
HDAC7-213ENST00000440293 LZTS2Q9BRK4 669 aa20.97■□□□□ 0.95
HDAC7-213ENST00000440293 MYL10Q9BUA6 226 aa20.97■□□□□ 0.95
HDAC7-213ENST00000440293 TLR3O15455 904 aaKnown RBP20.96■□□□□ 0.95
HDAC7-213ENST00000440293 CABYRO75952 493 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms