RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 FAM160B2Q86V87 743 aa16.72■□□□□ 0.27
LINC01088-201ENST00000437737 PHOSPHO2Q8TCD6 241 aa16.72■□□□□ 0.27
LINC01088-201ENST00000437737 CHURC1Q8WUH1 139 aa16.72■□□□□ 0.27
LINC01088-201ENST00000437737 KHSRPQ92945 711 aaKnown RBP eCLIP16.72■□□□□ 0.277e-7■■□□□ 12.3
LINC01088-201ENST00000437737 CHMP4CQ96CF2 233 aa16.72■□□□□ 0.27
LINC01088-201ENST00000437737 FTOQ9C0B1 505 aaKnown RBP eCLIP16.72■□□□□ 0.27
LINC01088-201ENST00000437737 VTA1Q9NP79 307 aa16.72■□□□□ 0.27
LINC01088-201ENST00000437737 ZNF536O15090 1300 aa16.71■□□□□ 0.27
LINC01088-201ENST00000437737 TSPY3P0CV98 308 aa16.71■□□□□ 0.27
LINC01088-201ENST00000437737 TSPY8P0CW00 308 aa16.71■□□□□ 0.27
LINC01088-201ENST00000437737 SLC1A4P43007 532 aa16.71■□□□□ 0.27
LINC01088-201ENST00000437737 GRB10Q13322 594 aa16.71■□□□□ 0.27
LINC01088-201ENST00000437737 NSMFQ6X4W1 530 aa16.71■□□□□ 0.27
LINC01088-201ENST00000437737 HERC6Q8IVU3 1022 aa16.71■□□□□ 0.27
LINC01088-201ENST00000437737 RETREG2Q8NC44 543 aa16.71■□□□□ 0.27
LINC01088-201ENST00000437737 STAG1Q8WVM7 1258 aa16.71■□□□□ 0.27
LINC01088-201ENST00000437737 C11orf16Q9NQ32 467 aa16.71■□□□□ 0.27
LINC01088-201ENST00000437737 GPHNQ9NQX3 736 aaPredicted RBP16.71■□□□□ 0.27
LINC01088-201ENST00000437737 CYP39A1Q9NYL5 469 aa16.71■□□□□ 0.27
LINC01088-201ENST00000437737 ARHGEF15O94989 841 aa16.7■□□□□ 0.26
LINC01088-201ENST00000437737 APPP05067 770 aa16.7■□□□□ 0.26
LINC01088-201ENST00000437737 CPT1AP50416 773 aa16.7■□□□□ 0.26
LINC01088-201ENST00000437737 IRX6P78412 446 aaPredicted RBP16.7■□□□□ 0.26
LINC01088-201ENST00000437737 PURAQ00577 322 aaKnown RBP16.7■□□□□ 0.26
LINC01088-201ENST00000437737 DUSP28Q4G0W2 176 aa16.7■□□□□ 0.26
LINC01088-201ENST00000437737 MUM1L1Q5H9M0 696 aa16.7■□□□□ 0.26
LINC01088-201ENST00000437737 PTPRSQ13332 1948 aa16.7■□□□□ 0.26
LINC01088-201ENST00000437737 IQCF3P0C7M6 154 aa16.69■□□□□ 0.26
LINC01088-201ENST00000437737 KCNJ6P48051 423 aa16.69■□□□□ 0.26
LINC01088-201ENST00000437737 SNAP25P60880 206 aa16.69■□□□□ 0.26
LINC01088-201ENST00000437737 ALYREFQ86V81 257 aaKnown RBP16.69■□□□□ 0.26
LINC01088-201ENST00000437737 PURBQ96QR8 312 aaKnown RBP16.69■□□□□ 0.26
LINC01088-201ENST00000437737 MTG1Q9BT17 334 aaPredicted RBP16.69■□□□□ 0.26
LINC01088-201ENST00000437737 WDR11Q9BZH6 1224 aa16.69■□□□□ 0.26
LINC01088-201ENST00000437737 EPB41L4AQ9HCS5 686 aaPredicted RBP16.69■□□□□ 0.26
LINC01088-201ENST00000437737 DDX19BQ9UMR2 479 aa16.69■□□□□ 0.26
LINC01088-201ENST00000437737 SCN10AQ9Y5Y9 1956 aa16.69■□□□□ 0.26
LINC01088-201ENST00000437737 PLIN4Q96Q06 1357 aa16.68■□□□□ 0.26
LINC01088-201ENST00000437737 TRIP12Q14669 1992 aaPredicted RBP16.68■□□□□ 0.26
LINC01088-201ENST00000437737 PITPNM1O00562 1244 aa16.68■□□□□ 0.26
LINC01088-201ENST00000437737 MCCP23508 829 aa16.68■□□□□ 0.26
LINC01088-201ENST00000437737 BRDTQ58F21 947 aaPredicted RBP16.68■□□□□ 0.26
LINC01088-201ENST00000437737 C20orf194Q5TEA3 1177 aa16.68■□□□□ 0.26
LINC01088-201ENST00000437737 TET1Q8NFU7 2136 aa16.68■□□□□ 0.26
LINC01088-201ENST00000437737 OR6J1Q8NGC5 347 aa16.68■□□□□ 0.26
LINC01088-201ENST00000437737 NEDD1Q8NHV4 660 aa16.68■□□□□ 0.26
LINC01088-201ENST00000437737 APPBP2Q92624 585 aa16.68■□□□□ 0.26
LINC01088-201ENST00000437737 GMCL1Q96IK5 515 aa16.68■□□□□ 0.26
LINC01088-201ENST00000437737 CRBNQ96SW2 442 aa16.68■□□□□ 0.26
LINC01088-201ENST00000437737 CCPG1Q9ULG6 757 aa16.68■□□□□ 0.26
LINC01088-201ENST00000437737 NOD1Q9Y239 953 aa16.68■□□□□ 0.26
LINC01088-201ENST00000437737 PI4K2BG5E9Z4 385 aa16.67■□□□□ 0.26
LINC01088-201ENST00000437737 GPAA1O43292 621 aa16.67■□□□□ 0.26
LINC01088-201ENST00000437737 LPXNO60711 386 aa16.67■□□□□ 0.26
LINC01088-201ENST00000437737 BAIAP3O94812 1187 aa16.67■□□□□ 0.26
LINC01088-201ENST00000437737 GNAT2P19087 354 aa16.67■□□□□ 0.26
LINC01088-201ENST00000437737 TFAP4Q01664 338 aa16.67■□□□□ 0.26
LINC01088-201ENST00000437737 PDE4BQ07343 736 aa16.67■□□□□ 0.26
LINC01088-201ENST00000437737 BFSP2Q13515 415 aa16.67■□□□□ 0.26
LINC01088-201ENST00000437737 NBPF20Q3BBV1 942 aa16.67■□□□□ 0.26
LINC01088-201ENST00000437737 KCTD1Q719H9 257 aa16.67■□□□□ 0.26
LINC01088-201ENST00000437737 SPRED2Q7Z698 418 aa16.67■□□□□ 0.26
LINC01088-201ENST00000437737 SIRT2Q8IXJ6 389 aa16.67■□□□□ 0.26
LINC01088-201ENST00000437737 MORC4Q8TE76 937 aa16.67■□□□□ 0.26
LINC01088-201ENST00000437737 GDPD5Q8WTR4 605 aa16.67■□□□□ 0.26
LINC01088-201ENST00000437737 PPP1R13LQ8WUF5 828 aa16.67■□□□□ 0.26
LINC01088-201ENST00000437737 OSBP2Q969R2 916 aa16.67■□□□□ 0.26
LINC01088-201ENST00000437737 ADD3Q9UEY8 706 aaKnown RBP16.67■□□□□ 0.26
LINC01088-201ENST00000437737 PRR12Q9ULL5 1215 aa16.67■□□□□ 0.26
LINC01088-201ENST00000437737 RAD50Q92878 1312 aa16.67■□□□□ 0.26
LINC01088-201ENST00000437737 ALDH5A1P51649 535 aaPredicted RBP16.66■□□□□ 0.26
LINC01088-201ENST00000437737 ZBED2Q9BTP6 218 aa16.66■□□□□ 0.26
LINC01088-201ENST00000437737 CD320Q9NPF0 282 aa16.66■□□□□ 0.26
LINC01088-201ENST00000437737 STX8Q9UNK0 236 aa16.66■□□□□ 0.26
LINC01088-201ENST00000437737 MUC6Q6W4X9 2439 aa16.66■□□□□ 0.26
LINC01088-201ENST00000437737 PLA2G6O60733 806 aa16.65■□□□□ 0.26
LINC01088-201ENST00000437737 SLC3A2P08195 630 aaKnown RBP16.65■□□□□ 0.26
LINC01088-201ENST00000437737 CHMP4BP1P59074 171 aa16.65■□□□□ 0.26
LINC01088-201ENST00000437737 BAATQ14032 418 aaPredicted RBP16.65■□□□□ 0.26
LINC01088-201ENST00000437737 RCSD1Q6JBY9 416 aa16.65■□□□□ 0.26
LINC01088-201ENST00000437737 NFRKBQ6P4R8 1299 aa16.65■□□□□ 0.26
LINC01088-201ENST00000437737 IFNL3Q8IZI9 196 aa16.65■□□□□ 0.26
LINC01088-201ENST00000437737 KBTBD3Q8NAB2 608 aa16.65■□□□□ 0.26
LINC01088-201ENST00000437737 EXOC6Q8TAG9 804 aa16.65■□□□□ 0.26
LINC01088-201ENST00000437737 PPP4R2Q9NY27 417 aa16.65■□□□□ 0.26
LINC01088-201ENST00000437737 LMCD1Q9NZU5 365 aa16.65■□□□□ 0.26
LINC01088-201ENST00000437737 MTUS1Q9ULD2 1270 aa16.65■□□□□ 0.26
LINC01088-201ENST00000437737 MTMR7Q9Y216 660 aa16.65■□□□□ 0.26
LINC01088-201ENST00000437737 BRWD1Q9NSI6 2320 aa16.65■□□□□ 0.26
LINC01088-201ENST00000437737 SIP14410 1827 aa16.64■□□□□ 0.25
LINC01088-201ENST00000437737 PTPDC1A2A3K4 754 aa16.64■□□□□ 0.25
LINC01088-201ENST00000437737 LCHNA4D1U4 455 aa16.64■□□□□ 0.25
LINC01088-201ENST00000437737 PRR33A8MZF0 331 aa16.64■□□□□ 0.25
LINC01088-201ENST00000437737 PATL2C9JE40 543 aaKnown RBP16.64■□□□□ 0.25
LINC01088-201ENST00000437737 M0R2C6 588 aa16.64■□□□□ 0.25
LINC01088-201ENST00000437737 RNF113AO15541 343 aaKnown RBP16.64■□□□□ 0.25
LINC01088-201ENST00000437737 ICAM1P05362 532 aa16.64■□□□□ 0.25
LINC01088-201ENST00000437737 SSTR3P32745 418 aaPredicted RBP16.64■□□□□ 0.25
LINC01088-201ENST00000437737 PTPN11Q06124 597 aaPredicted RBP16.64■□□□□ 0.25
LINC01088-201ENST00000437737 PPP2R5BQ15173 497 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms