RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 UBE4AQ14139 1066 aa16.46■□□□□ 0.23
DDX56-205ENST00000433257 GLE1Q53GS7 698 aaKnown RBP16.46■□□□□ 0.23
DDX56-205ENST00000433257 CCNI2Q6ZMN8 369 aaPredicted RBP16.46■□□□□ 0.23
DDX56-205ENST00000433257 CMTR1Q8N1G2 835 aaKnown RBP16.46■□□□□ 0.23
DDX56-205ENST00000433257 SECISBP2LQ93073 1101 aaKnown RBP16.46■□□□□ 0.23
DDX56-205ENST00000433257 ALS2CR12Q96Q35 445 aa16.46■□□□□ 0.23
DDX56-205ENST00000433257 ERGIC2Q96RQ1 377 aa16.46■□□□□ 0.23
DDX56-205ENST00000433257 ARPP21Q9UBL0 812 aaPredicted RBP16.46■□□□□ 0.23
DDX56-205ENST00000433257 REXO2Q9Y3B8 237 aaKnown RBP16.46■□□□□ 0.23
DDX56-205ENST00000433257 ATXN2Q99700 1313 aaKnown RBP16.46■□□□□ 0.23
DDX56-205ENST00000433257 FAM205CA6NFA0 338 aa16.46■□□□□ 0.23
DDX56-205ENST00000433257 SYF2O95926 243 aaKnown RBP16.46■□□□□ 0.23
DDX56-205ENST00000433257 TRIM21P19474 475 aaKnown RBP16.46■□□□□ 0.23
DDX56-205ENST00000433257 KCNA3P22001 575 aa16.46■□□□□ 0.23
DDX56-205ENST00000433257 CCNE1P24864 410 aa16.46■□□□□ 0.23
DDX56-205ENST00000433257 ALDH1B1P30837 517 aa16.46■□□□□ 0.23
DDX56-205ENST00000433257 HNRNPH3P31942 346 aaKnown RBP16.46■□□□□ 0.23
DDX56-205ENST00000433257 HERVK_113P62684 666 aa16.46■□□□□ 0.23
DDX56-205ENST00000433257 GPR162Q16538 588 aa16.46■□□□□ 0.23
DDX56-205ENST00000433257 ALS2CLQ60I27 953 aa16.46■□□□□ 0.23
DDX56-205ENST00000433257 PIK3AP1Q6ZUJ8 805 aa16.46■□□□□ 0.23
DDX56-205ENST00000433257 CNKSR1Q969H4 720 aa16.46■□□□□ 0.23
DDX56-205ENST00000433257 RBM17Q96I25 401 aaKnown RBP16.46■□□□□ 0.23
DDX56-205ENST00000433257 TRERF1Q96PN7 1200 aa16.46■□□□□ 0.23
DDX56-205ENST00000433257 RIOK1Q9BRS2 568 aaKnown RBP16.46■□□□□ 0.23
DDX56-205ENST00000433257 EDEM3Q9BZQ6 932 aa16.46■□□□□ 0.23
DDX56-205ENST00000433257 BLZF1Q9H2G9 400 aa16.46■□□□□ 0.23
DDX56-205ENST00000433257 ATP8A2Q9NTI2 1148 aa16.46■□□□□ 0.23
DDX56-205ENST00000433257 PCDHA4Q9UN74 947 aa16.46■□□□□ 0.23
DDX56-205ENST00000433257 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.46■□□□□ 0.23
DDX56-205ENST00000433257 KIF13BQ9NQT8 1826 aa16.45■□□□□ 0.22
DDX56-205ENST00000433257 MAST2Q6P0Q8 1798 aa16.45■□□□□ 0.22
DDX56-205ENST00000433257 GOLGA6BA6NDN3 693 aa16.45■□□□□ 0.22
DDX56-205ENST00000433257 PLEKHA8P1O95397 391 aa16.45■□□□□ 0.22
DDX56-205ENST00000433257 UBA7P41226 1012 aa16.45■□□□□ 0.22
DDX56-205ENST00000433257 CRY2Q49AN0 593 aa16.45■□□□□ 0.22
DDX56-205ENST00000433257 SBK1Q52WX2 424 aa16.45■□□□□ 0.22
DDX56-205ENST00000433257 CAVIN4Q5BKX8 364 aa16.45■□□□□ 0.22
DDX56-205ENST00000433257 DALRD3Q5D0E6 543 aaKnown RBP16.45■□□□□ 0.22
DDX56-205ENST00000433257 EARS2Q5JPH6 523 aaKnown RBP16.45■□□□□ 0.22
DDX56-205ENST00000433257 STYK1Q6J9G0 422 aa16.45■□□□□ 0.22
DDX56-205ENST00000433257 EMBQ6PCB8 327 aa16.45■□□□□ 0.22
DDX56-205ENST00000433257 FOXR2Q6PJQ5 311 aa16.45■□□□□ 0.22
DDX56-205ENST00000433257 TTLL6Q8N841 843 aa16.45■□□□□ 0.22
DDX56-205ENST00000433257 RASSF8Q8NHQ8 419 aa16.45■□□□□ 0.22
DDX56-205ENST00000433257 CHP1Q99653 195 aa16.45■□□□□ 0.22
DDX56-205ENST00000433257 LZTS2Q9BRK4 669 aa16.45■□□□□ 0.22
DDX56-205ENST00000433257 TTYH3Q9C0H2 523 aa16.45■□□□□ 0.22
DDX56-205ENST00000433257 KBTBD4Q9NVX7 518 aa16.45■□□□□ 0.22
DDX56-205ENST00000433257 A0A0U1RQJ8 604 aa16.44■□□□□ 0.22
DDX56-205ENST00000433257 CCDC194A0A1B0GVG4 234 aa16.44■□□□□ 0.22
DDX56-205ENST00000433257 SHTN1A0MZ66 631 aa16.44■□□□□ 0.22
DDX56-205ENST00000433257 N4BP1O75113 896 aaKnown RBP16.44■□□□□ 0.22
DDX56-205ENST00000433257 ATP1A1P05023 1023 aaKnown RBP16.44■□□□□ 0.22
DDX56-205ENST00000433257 EPB41P11171 864 aaKnown RBP16.44■□□□□ 0.22
DDX56-205ENST00000433257 MCM7P33993 719 aa16.44■□□□□ 0.22
DDX56-205ENST00000433257 USP8P40818 1118 aa16.44■□□□□ 0.22
DDX56-205ENST00000433257 EPHB4P54760 987 aa16.44■□□□□ 0.22
DDX56-205ENST00000433257 ZSCAN29Q8IWY8 852 aaPredicted RBP16.44■□□□□ 0.22
DDX56-205ENST00000433257 MIGA1Q8NAN2 632 aa16.44■□□□□ 0.22
DDX56-205ENST00000433257 HELBQ8NG08 1087 aaPredicted RBP16.44■□□□□ 0.22
DDX56-205ENST00000433257 ATRIPQ8WXE1 791 aa16.44■□□□□ 0.22
DDX56-205ENST00000433257 SHISA4Q96DD7 197 aa16.44■□□□□ 0.22
DDX56-205ENST00000433257 MMS19Q96T76 1030 aa16.44■□□□□ 0.22
DDX56-205ENST00000433257 TUBGCP2Q9BSJ2 902 aa16.44■□□□□ 0.22
DDX56-205ENST00000433257 SELENOOQ9BVL4 669 aa16.44■□□□□ 0.22
DDX56-205ENST00000433257 CRNKL1Q9BZJ0 848 aaKnown RBP16.44■□□□□ 0.22
DDX56-205ENST00000433257 YY1AP1Q9H869 796 aa16.44■□□□□ 0.22
DDX56-205ENST00000433257 NHEJ1Q9H9Q4 299 aaPredicted RBP16.44■□□□□ 0.22
DDX56-205ENST00000433257 LUC7LQ9NQ29 371 aaKnown RBP16.44■□□□□ 0.22
DDX56-205ENST00000433257 BCS1LQ9Y276 419 aa16.44■□□□□ 0.22
DDX56-205ENST00000433257 CACNA1SQ13698 1873 aa16.44■□□□□ 0.22
DDX56-205ENST00000433257 A0A1B0GUL6 1792 aa16.44■□□□□ 0.22
DDX56-205ENST00000433257 GOLGA6CA6NDK9 693 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 PRDM1O75626 825 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 GOLGA6DP0CG33 693 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 IDEP14735 1019 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 CASP1P29466 404 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 BCAMP50895 628 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 TBC1D8BQ0IIM8 1120 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 TTI2Q6NXR4 508 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 CNNM4Q6P4Q7 775 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 WDR59Q6PJI9 974 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 CCDC84Q86UT8 332 aaPredicted RBP16.43■□□□□ 0.22
DDX56-205ENST00000433257 POTEDQ86YR6 584 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 IRF2BP1Q8IU81 584 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 CSGALNACT2Q8N6G5 542 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 C4orf32Q8N8J7 132 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 P2RX5Q93086 422 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 CCDC42Q96M95 316 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 RUFY1Q96T51 708 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 NUCKS1Q9H1E3 243 aaKnown RBP16.43■□□□□ 0.22
DDX56-205ENST00000433257 TCP11L1Q9NUJ3 509 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 GOLGA6AQ9NYA3 693 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 PAFAH1B1P43034 410 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 SF3B3Q15393 1217 aaKnown RBP16.43■□□□□ 0.22
DDX56-205ENST00000433257 C3orf67Q6ZVT6 689 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 DGKHQ86XP1 1220 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 SRBD1Q8N5C6 995 aaKnown RBP16.43■□□□□ 0.22
DDX56-205ENST00000433257 AENQ8WTP8 325 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms