RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 TRMT1Q9NXH9 659 aaKnown RBP9.38□□□□□ -0.91
HDAC9-212ENST00000432645 USP27XA6NNY8 438 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 F5H6K3 240 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 ZBTB5O15062 677 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 SLC37A4O43826 429 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 CCZ1BP86790 482 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 CCZ1P86791 482 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-212ENST00000432645 KLRC3Q07444 240 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 NAA30Q147X3 362 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-212ENST00000432645 DLGAP5Q15398 846 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 ENOX1Q8TC92 643 aaKnown RBP9.37□□□□□ -0.91
HDAC9-212ENST00000432645 LRRC15Q8TF66 581 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 INTS13Q9NVM9 706 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-212ENST00000432645 SPDYE2BA6NHP3 402 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 USP17L15C9J2P7 530 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 USP17L13C9JLJ4 530 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 USP17L11C9JVI0 530 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 USP17L18D6R9N7 530 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 USP17L22D6RA61 530 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 USP17L17D6RBQ6 530 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 USP17L19D6RCP7 530 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 USP17L20D6RJB6 530 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 RIOK3O14730 519 aaKnown RBP9.37□□□□□ -0.91
HDAC9-212ENST00000432645 SPDYE6P0CI01 402 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 USP17L24Q0WX57 530 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 USP17L6PQ6QN14 398 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 MIGA2Q7L4E1 593 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 ZNF513Q8N8E2 541 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-212ENST00000432645 PSTPIP2Q9H939 334 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.37□□□□□ -0.91
HDAC9-212ENST00000432645 CTNND2Q9UQB3 1225 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 GDAQ9Y2T3 454 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 ESYT2A0FGR8 921 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 PPP1R3GB7ZBB8 358 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 EDIL3O43854 480 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 PLCG1P19174 1290 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 SFPQP23246 707 aaKnown RBP eCLIP9.37□□□□□ -0.91
HDAC9-212ENST00000432645 TPD52L1Q16890 204 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-212ENST00000432645 QRICH1Q2TAL8 776 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 RBM26Q5T8P6 1007 aaKnown RBP9.37□□□□□ -0.91
HDAC9-212ENST00000432645 TMEM179Q6ZVK1 233 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 CABP7Q86V35 215 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 TMOD2Q9NZR1 351 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 NYAP2Q9P242 653 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 PCDHA1Q9Y5I3 950 aa9.37□□□□□ -0.91
HDAC9-212ENST00000432645 MYH8P13535 1937 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 SYNRGQ9UMZ2 1314 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 A0A1W2PRG0 241 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 LAD1O00515 517 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 CBFA2T2O43439 604 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 GTPBP6O43824 516 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-212ENST00000432645 RPN1P04843 607 aaKnown RBP9.36□□□□□ -0.91
HDAC9-212ENST00000432645 ZNF18P17022 549 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 ECE1P42892 770 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 GSDMDP57764 484 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 CALCRLQ16602 461 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 USH1GQ495M9 461 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 RINLQ6ZS11 566 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 IMPACTQ9P2X3 320 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 C10orf71Q711Q0 1435 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 POTEMA6NI47 508 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 ENTPD3O75355 529 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 NDUFB10O96000 172 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 ERCC5P28715 1186 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-212ENST00000432645 CDC37Q16543 378 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-212ENST00000432645 CUL5Q93034 780 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 MKL1Q969V6 931 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 PYM1Q9BRP8 204 aaKnown RBP9.36□□□□□ -0.91
HDAC9-212ENST00000432645 TMEM39BQ9GZU3 492 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 RIC8AQ9NPQ8 531 aa9.36□□□□□ -0.91
HDAC9-212ENST00000432645 COL4A5P29400 1685 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 SHTN1A0MZ66 631 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 hCG_1984214I3L0E3 225 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 VIL1P09327 827 aaKnown RBP9.35□□□□□ -0.91
HDAC9-212ENST00000432645 PRPHP41219 470 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 MRPL12P52815 198 aaKnown RBP9.35□□□□□ -0.91
HDAC9-212ENST00000432645 ZYXQ15942 572 aaKnown RBP9.35□□□□□ -0.91
HDAC9-212ENST00000432645 FAM177A1Q8N128 213 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-212ENST00000432645 ZNF713Q8N859 430 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-212ENST00000432645 ZNF70Q9UC06 446 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-212ENST00000432645 HDAC9Q9UKV0 1011 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 MTA1Q13330 715 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 SPATA1Q5VX52 437 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 ZNF771Q7L3S4 317 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-212ENST00000432645 VSTM4Q8IW00 320 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 NIM1KQ8IY84 436 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 EEF2KMTQ96G04 330 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 CCSER1Q9C0I3 900 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 DONSONQ9NYP3 566 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 TEX33O43247 280 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 MARCH6O60337 910 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 PRCPP42785 496 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 CXCL9Q07325 125 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 KMT5BQ4FZB7 885 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 ACER1Q8TDN7 264 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 GMLQ99445 158 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 MMTAG2Q9BU76 263 aaKnown RBP9.35□□□□□ -0.91
HDAC9-212ENST00000432645 LRWD1Q9UFC0 647 aa9.35□□□□□ -0.91
HDAC9-212ENST00000432645 RGPD3A6NKT7 1758 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms