RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 SLC12A7Q9Y666 1083 aa20.24■□□□□ 0.83
CTSD-203ENST00000429746 EDNRBP24530 442 aa20.23■□□□□ 0.83
CTSD-203ENST00000429746 CDC27P30260 824 aa20.23■□□□□ 0.83
CTSD-203ENST00000429746 CTCFLQ8NI51 663 aaPredicted RBP20.23■□□□□ 0.83
CTSD-203ENST00000429746 AMNQ9BXJ7 453 aa20.23■□□□□ 0.83
CTSD-203ENST00000429746 CNTNAP5Q8WYK1 1306 aa20.23■□□□□ 0.83
CTSD-203ENST00000429746 PNMA6FA0A0J9YX94 578 aa20.22■□□□□ 0.83
CTSD-203ENST00000429746 CALM1P0DP23 149 aa20.22■□□□□ 0.83
CTSD-203ENST00000429746 CALM2P0DP24 149 aa20.22■□□□□ 0.83
CTSD-203ENST00000429746 CALM3P0DP25 149 aa20.22■□□□□ 0.83
CTSD-203ENST00000429746 COL6A1P12109 1028 aa20.22■□□□□ 0.83
CTSD-203ENST00000429746 RCAN1P53805 252 aa20.22■□□□□ 0.83
CTSD-203ENST00000429746 APOBRQ0VD83 1088 aa20.22■□□□□ 0.83
CTSD-203ENST00000429746 RNF207Q6ZRF8 634 aa20.22■□□□□ 0.83
CTSD-203ENST00000429746 RUFY3Q7L099 469 aa20.22■□□□□ 0.83
CTSD-203ENST00000429746 HOMER1Q86YM7 354 aa20.22■□□□□ 0.83
CTSD-203ENST00000429746 SYTL5Q8TDW5 730 aaPredicted RBP20.22■□□□□ 0.83
CTSD-203ENST00000429746 BRF1Q92994 677 aa20.22■□□□□ 0.83
CTSD-203ENST00000429746 LENG1Q96BZ8 264 aaPredicted RBP20.22■□□□□ 0.83
CTSD-203ENST00000429746 PAWRQ96IZ0 340 aaKnown RBP20.22■□□□□ 0.83
CTSD-203ENST00000429746 MAF1Q9H063 256 aa20.22■□□□□ 0.83
CTSD-203ENST00000429746 PCDH10Q9P2E7 1040 aa20.22■□□□□ 0.83
CTSD-203ENST00000429746 KLF18A0A0U1RQI7 1052 aa20.21■□□□□ 0.83
CTSD-203ENST00000429746 DHX16O60231 1041 aaKnown RBP20.21■□□□□ 0.83
CTSD-203ENST00000429746 EVI5O60447 810 aa20.21■□□□□ 0.83
CTSD-203ENST00000429746 MSCO60682 206 aa20.21■□□□□ 0.83
CTSD-203ENST00000429746 KIF5BP33176 963 aa20.21■□□□□ 0.83
CTSD-203ENST00000429746 ALDH5A1P51649 535 aaPredicted RBP20.21■□□□□ 0.83
CTSD-203ENST00000429746 HSD17B4P51659 736 aa20.21■□□□□ 0.83
CTSD-203ENST00000429746 ANO1Q5XXA6 986 aa20.21■□□□□ 0.83
CTSD-203ENST00000429746 UPF3BQ9BZI7 483 aaKnown RBP20.21■□□□□ 0.83
CTSD-203ENST00000429746 PTPDC1A2A3K4 754 aa20.2■□□□□ 0.82
CTSD-203ENST00000429746 CALML3P27482 149 aa20.2■□□□□ 0.82
CTSD-203ENST00000429746 PSMA5P28066 241 aa20.2■□□□□ 0.82
CTSD-203ENST00000429746 ACVR2BQ13705 512 aa20.2■□□□□ 0.82
CTSD-203ENST00000429746 TMEM63BQ5T3F8 832 aa20.2■□□□□ 0.82
CTSD-203ENST00000429746 TAPT1Q6NXT6 567 aa20.2■□□□□ 0.82
CTSD-203ENST00000429746 LZTS2Q9BRK4 669 aa20.2■□□□□ 0.82
CTSD-203ENST00000429746 COLQQ9Y215 455 aaPredicted RBP20.2■□□□□ 0.82
CTSD-203ENST00000429746 PCDHA1Q9Y5I3 950 aa20.2■□□□□ 0.82
CTSD-203ENST00000429746 hCG_1642624A0A1W2PR95 340 aa20.19■□□□□ 0.82
CTSD-203ENST00000429746 ZBTB43O43298 467 aa20.19■□□□□ 0.82
CTSD-203ENST00000429746 PTGS1P23219 599 aa20.19■□□□□ 0.82
CTSD-203ENST00000429746 CNGA1P29973 690 aa20.19■□□□□ 0.82
CTSD-203ENST00000429746 ANAPC15P60006 121 aa20.19■□□□□ 0.82
CTSD-203ENST00000429746 TAAR1Q96RJ0 339 aa20.19■□□□□ 0.82
CTSD-203ENST00000429746 ABHD16BQ9H3Z7 469 aa20.19■□□□□ 0.82
CTSD-203ENST00000429746 MRPL11Q9Y3B7 192 aaKnown RBP20.19■□□□□ 0.82
CTSD-203ENST00000429746 KIAA1217Q5T5P2 1943 aa20.19■□□□□ 0.82
CTSD-203ENST00000429746 LOC102724159A0A0B4J2E5 919 aa20.18■□□□□ 0.82
CTSD-203ENST00000429746 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.18■□□□□ 0.82
CTSD-203ENST00000429746 ASB14A6NK59 587 aa20.18■□□□□ 0.82
CTSD-203ENST00000429746 CTAGE5O15320 804 aa20.18■□□□□ 0.82
CTSD-203ENST00000429746 ADAMTS4O75173 837 aa20.18■□□□□ 0.82
CTSD-203ENST00000429746 ADD1P35611 737 aaKnown RBP20.18■□□□□ 0.82
CTSD-203ENST00000429746 GNAQP50148 359 aa20.18■□□□□ 0.82
CTSD-203ENST00000429746 IRX5P78411 483 aaPredicted RBP20.18■□□□□ 0.82
CTSD-203ENST00000429746 PWP2Q15269 919 aaKnown RBP20.18■□□□□ 0.82
CTSD-203ENST00000429746 NTRK3Q16288 839 aa20.18■□□□□ 0.82
CTSD-203ENST00000429746 PIBF1Q8WXW3 757 aa20.18■□□□□ 0.82
CTSD-203ENST00000429746 C11orf49Q9H6J7 331 aa20.18■□□□□ 0.82
CTSD-203ENST00000429746 PDGFCQ9NRA1 345 aa20.18■□□□□ 0.82
CTSD-203ENST00000429746 AKR1A1P14550 325 aa20.17■□□□□ 0.82
CTSD-203ENST00000429746 RTN1Q16799 776 aa20.17■□□□□ 0.82
CTSD-203ENST00000429746 CCDC144BQ3MJ40 725 aa20.17■□□□□ 0.82
CTSD-203ENST00000429746 TYW1BQ6NUM6 668 aa20.17■□□□□ 0.82
CTSD-203ENST00000429746 DNERQ8NFT8 737 aa20.17■□□□□ 0.82
CTSD-203ENST00000429746 CNPY2Q9Y2B0 182 aa20.17■□□□□ 0.82
CTSD-203ENST00000429746 RBM47A0AV96 593 aaKnown RBP20.16■□□□□ 0.82
CTSD-203ENST00000429746 GOLGA8AA7E2F4 631 aa20.16■□□□□ 0.82
CTSD-203ENST00000429746 GOLGA8BA8MQT2 603 aa20.16■□□□□ 0.82
CTSD-203ENST00000429746 PDIA3P30101 505 aaKnown RBP20.16■□□□□ 0.82
CTSD-203ENST00000429746 NKX3-2P78367 333 aa20.16■□□□□ 0.82
CTSD-203ENST00000429746 CCSAPQ6IQ19 270 aaPredicted RBP20.16■□□□□ 0.82
CTSD-203ENST00000429746 FBXO16Q8IX29 292 aaPredicted RBP20.16■□□□□ 0.82
CTSD-203ENST00000429746 CCDC82Q8N4S0 544 aa20.16■□□□□ 0.82
CTSD-203ENST00000429746 RRP36Q96EU6 259 aaKnown RBP20.16■□□□□ 0.82
CTSD-203ENST00000429746 KIF2CQ99661 725 aa20.16■□□□□ 0.82
CTSD-203ENST00000429746 RBM28Q9NW13 759 aaKnown RBP20.16■□□□□ 0.82
CTSD-203ENST00000429746 ADD3Q9UEY8 706 aaKnown RBP20.16■□□□□ 0.82
CTSD-203ENST00000429746 ZHX1Q9UKY1 873 aaPredicted RBP20.16■□□□□ 0.82
CTSD-203ENST00000429746 GNEQ9Y223 722 aaKnown RBP20.16■□□□□ 0.82
CTSD-203ENST00000429746 CYP46A1Q9Y6A2 500 aa20.16■□□□□ 0.82
CTSD-203ENST00000429746 RANBP2P49792 3224 aaKnown RBP20.15■□□□□ 0.82
CTSD-203ENST00000429746 A0A1W2PPC1 479 aa20.15■□□□□ 0.82
CTSD-203ENST00000429746 MYADML2A6NDP7 307 aa20.15■□□□□ 0.82
CTSD-203ENST00000429746 ADCYAP1R1P41586 468 aa20.15■□□□□ 0.82
CTSD-203ENST00000429746 LRRC41Q15345 812 aa20.15■□□□□ 0.82
CTSD-203ENST00000429746 MCF2L2Q86YR7 1114 aa20.15■□□□□ 0.82
CTSD-203ENST00000429746 UPF3AQ9H1J1 476 aaKnown RBP20.15■□□□□ 0.82
CTSD-203ENST00000429746 ALDH8A1Q9H2A2 487 aaPredicted RBP20.15■□□□□ 0.82
CTSD-203ENST00000429746 FRMPD4Q14CM0 1322 aa20.15■□□□□ 0.82
CTSD-203ENST00000429746 SYNRGQ9UMZ2 1314 aa20.15■□□□□ 0.82
CTSD-203ENST00000429746 MEIS2O14770 477 aa20.14■□□□□ 0.81
CTSD-203ENST00000429746 CFBP00751 764 aa20.14■□□□□ 0.81
CTSD-203ENST00000429746 HOXA13P31271 388 aaPredicted RBP20.14■□□□□ 0.81
CTSD-203ENST00000429746 GJC2Q5T442 439 aaPredicted RBP20.14■□□□□ 0.81
CTSD-203ENST00000429746 CHRDL2Q6WN34 429 aa20.14■□□□□ 0.81
CTSD-203ENST00000429746 KLHDC9Q8NEP7 349 aa20.14■□□□□ 0.81
CTSD-203ENST00000429746 IL31RAQ8NI17 732 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms