RNA–Protein interactions for RNA: ENST00000428557.1

AC006001.2-203, humanhuman

TSL 3

Gene AC006001.2, Length 304 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.2-203ENST00000428557 RGS22Q8NE09 1264 aa13.79□□□□□ -0.2
AC006001.2-203ENST00000428557 IGDCC4Q8TDY8 1250 aa13.79□□□□□ -0.2
AC006001.2-203ENST00000428557 MPHOSPH6Q99547 160 aaKnown RBP13.79□□□□□ -0.2
AC006001.2-203ENST00000428557 UPF3AQ9H1J1 476 aaKnown RBP13.79□□□□□ -0.2
AC006001.2-203ENST00000428557 VTA1Q9NP79 307 aa13.79□□□□□ -0.2
AC006001.2-203ENST00000428557 GPHNQ9NQX3 736 aaPredicted RBP13.79□□□□□ -0.2
AC006001.2-203ENST00000428557 MYH4Q9Y623 1939 aa13.78□□□□□ -0.2
AC006001.2-203ENST00000428557 CDC45O75419 566 aa13.78□□□□□ -0.2
AC006001.2-203ENST00000428557 CST5P28325 142 aaPredicted RBP13.78□□□□□ -0.2
AC006001.2-203ENST00000428557 MCM5P33992 734 aa13.78□□□□□ -0.2
AC006001.2-203ENST00000428557 BMP8BP34820 402 aa13.78□□□□□ -0.2
AC006001.2-203ENST00000428557 SNX17Q15036 470 aa13.78□□□□□ -0.2
AC006001.2-203ENST00000428557 TMEM63BQ5T3F8 832 aa13.78□□□□□ -0.2
AC006001.2-203ENST00000428557 CCSAPQ6IQ19 270 aaPredicted RBP13.78□□□□□ -0.2
AC006001.2-203ENST00000428557 MORC4Q8TE76 937 aa13.78□□□□□ -0.2
AC006001.2-203ENST00000428557 PIBF1Q8WXW3 757 aa13.78□□□□□ -0.2
AC006001.2-203ENST00000428557 GLT1D1Q96MS3 346 aa13.78□□□□□ -0.2
AC006001.2-203ENST00000428557 AMNQ9BXJ7 453 aa13.78□□□□□ -0.2
AC006001.2-203ENST00000428557 WDR11Q9BZH6 1224 aa13.78□□□□□ -0.2
AC006001.2-203ENST00000428557 GNEQ9Y223 722 aaKnown RBP13.78□□□□□ -0.2
AC006001.2-203ENST00000428557 A0A1W2PPC1 479 aa13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 B4DLN1 442 aa13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 ZBTB5O15062 677 aa13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 CFBP00751 764 aa13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 COL11A1P12107 1806 aaPredicted RBP13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 MRPL12P52815 198 aaKnown RBP13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 TROAPQ12815 778 aa13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 NECTIN1Q15223 517 aa13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 FSCN1Q16658 493 aaKnown RBP13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 PARP14Q460N5 1801 aa13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 RNF20Q5VTR2 975 aa13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 C1orf53Q5VUE5 145 aa13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 SH3RF1Q7Z6J0 888 aa13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 DNERQ8NFT8 737 aa13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 SYTL5Q8TDW5 730 aaPredicted RBP13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 TAAR1Q96RJ0 339 aa13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 PIGSQ96S52 555 aa13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 MYL10Q9BUA6 226 aa13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 LY9Q9HBG7 655 aa13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 PDLIM7Q9NR12 457 aa13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 PCDHA1Q9Y5I3 950 aa13.77□□□□□ -0.21
AC006001.2-203ENST00000428557 ELP1O95163 1332 aa13.76□□□□□ -0.21
AC006001.2-203ENST00000428557 LOC102724159A0A0B4J2E5 919 aa13.76□□□□□ -0.21
AC006001.2-203ENST00000428557 TRIM43BA6NCK2 446 aa13.76□□□□□ -0.21
AC006001.2-203ENST00000428557 CCDC69A6NI79 296 aa13.76□□□□□ -0.21
AC006001.2-203ENST00000428557 DCDC2CA8MYV0 355 aa13.76□□□□□ -0.21
AC006001.2-203ENST00000428557 CTAGE5O15320 804 aa13.76□□□□□ -0.21
AC006001.2-203ENST00000428557 ZEB2O60315 1214 aa13.76□□□□□ -0.21
AC006001.2-203ENST00000428557 PPP1R11O60927 126 aaPredicted RBP13.76□□□□□ -0.21
AC006001.2-203ENST00000428557 CLTBP09497 229 aa13.76□□□□□ -0.21
AC006001.2-203ENST00000428557 PWP2Q15269 919 aaKnown RBP13.76□□□□□ -0.21
AC006001.2-203ENST00000428557 SLC35G1Q2M3R5 365 aa13.76□□□□□ -0.21
AC006001.2-203ENST00000428557 CXCL17Q6UXB2 119 aa13.76□□□□□ -0.21
AC006001.2-203ENST00000428557 ZNF654Q8IZM8 581 aa13.76□□□□□ -0.21
AC006001.2-203ENST00000428557 NSUN6Q8TEA1 469 aaKnown RBP13.76□□□□□ -0.21
AC006001.2-203ENST00000428557 BADQ92934 168 aa13.76□□□□□ -0.21
AC006001.2-203ENST00000428557 TRIM43Q96BQ3 446 aaPredicted RBP13.76□□□□□ -0.21
AC006001.2-203ENST00000428557 LRRC2Q9BYS8 371 aa13.76□□□□□ -0.21
AC006001.2-203ENST00000428557 TMEM39AQ9NV64 488 aa13.76□□□□□ -0.21
AC006001.2-203ENST00000428557 A0A0U1RQG5 324 aaPredicted RBP13.75□□□□□ -0.21
AC006001.2-203ENST00000428557 SH2B2O14492 632 aaPredicted RBP13.75□□□□□ -0.21
AC006001.2-203ENST00000428557 COL9A3Q14050 684 aaPredicted RBP13.75□□□□□ -0.21
AC006001.2-203ENST00000428557 DUSP28Q4G0W2 176 aa13.75□□□□□ -0.21
AC006001.2-203ENST00000428557 ARHGEF16Q5VV41 709 aa13.75□□□□□ -0.21
AC006001.2-203ENST00000428557 TDHQ8IZJ6 230 aa13.75□□□□□ -0.21
AC006001.2-203ENST00000428557 TMTC2Q8N394 836 aa13.75□□□□□ -0.21
AC006001.2-203ENST00000428557 CTCFLQ8NI51 663 aaPredicted RBP13.75□□□□□ -0.21
AC006001.2-203ENST00000428557 MTMR8Q96EF0 704 aa13.75□□□□□ -0.21
AC006001.2-203ENST00000428557 TMEM87BQ96K49 555 aa13.75□□□□□ -0.21
AC006001.2-203ENST00000428557 RMDN3Q96TC7 470 aa13.75□□□□□ -0.21
AC006001.2-203ENST00000428557 RIOX1Q9H6W3 641 aa13.75□□□□□ -0.21
AC006001.2-203ENST00000428557 COL20A1Q9P218 1284 aa13.75□□□□□ -0.21
AC006001.2-203ENST00000428557 Q9Y3F1 56 aa13.75□□□□□ -0.21
AC006001.2-203ENST00000428557 PNMA6FA0A0J9YX94 578 aa13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 ARVCFO00192 962 aa13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 SOX1O00570 391 aaPredicted RBP13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 CYTH3O43739 400 aa13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 DDAH1O94760 285 aa13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 TXNP10599 105 aaKnown RBP13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 RAG1P15918 1043 aa13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 EIF2AK2P19525 551 aaKnown RBP13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 RXRAP19793 462 aa13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 EDNRBP24530 442 aa13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 HOXA13P31271 388 aaPredicted RBP13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 KIF5BP33176 963 aa13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 NKX3-2P78367 333 aa13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 TRAF1Q13077 416 aa13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 PPP2R5BQ15173 497 aa13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 SEPT14Q6ZU15 432 aa13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 ANKRD33Q7Z3H0 272 aa13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 RAB11FIP4Q86YS3 637 aa13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 OR6J1Q8NGC5 347 aa13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 SCFD2Q8WU76 684 aa13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 NEK1Q96PY6 1258 aa13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 MTA3Q9BTC8 594 aa13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 MAF1Q9H063 256 aa13.74□□□□□ -0.21
AC006001.2-203ENST00000428557 RBM47A0AV96 593 aaKnown RBP13.73□□□□□ -0.21
AC006001.2-203ENST00000428557 CABYRO75952 493 aa13.73□□□□□ -0.21
AC006001.2-203ENST00000428557 MYL3P08590 195 aa13.73□□□□□ -0.21
AC006001.2-203ENST00000428557 FAAP100Q0VG06 881 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms