RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 CKAP4Q07065 602 aaKnown RBP17.55■□□□□ 0.4
GHDC-203ENST00000428494 EHBP1Q8NDI1 1231 aa17.55■□□□□ 0.4
GHDC-203ENST00000428494 LRRC1Q9BTT6 524 aa17.55■□□□□ 0.4
GHDC-203ENST00000428494 STX8Q9UNK0 236 aa17.55■□□□□ 0.4
GHDC-203ENST00000428494 MOCS3O95396 460 aa17.54■□□□□ 0.4
GHDC-203ENST00000428494 ATP2B2Q01814 1243 aa17.54■□□□□ 0.4
GHDC-203ENST00000428494 FKBP15Q5T1M5 1219 aa17.54■□□□□ 0.4
GHDC-203ENST00000428494 ZNF662Q6ZS27 426 aa17.54■□□□□ 0.4
GHDC-203ENST00000428494 C2CD5Q86YS7 1000 aa17.54■□□□□ 0.4
GHDC-203ENST00000428494 CCDC170Q8IYT3 715 aa17.54■□□□□ 0.4
GHDC-203ENST00000428494 ANKRD13CQ8N6S4 541 aa17.54■□□□□ 0.4
GHDC-203ENST00000428494 RRP36Q96EU6 259 aaKnown RBP17.54■□□□□ 0.4
GHDC-203ENST00000428494 PURBQ96QR8 312 aaKnown RBP17.54■□□□□ 0.4
GHDC-203ENST00000428494 NUP58Q9BVL2 599 aa17.54■□□□□ 0.4
GHDC-203ENST00000428494 SEMA6BQ9H3T3 888 aa17.54■□□□□ 0.4
GHDC-203ENST00000428494 RABEP2Q9H5N1 569 aa17.54■□□□□ 0.4
GHDC-203ENST00000428494 ARHGAP20Q9P2F6 1191 aa17.54■□□□□ 0.4
GHDC-203ENST00000428494 VAV2P52735 878 aa17.54■□□□□ 0.4
GHDC-203ENST00000428494 SF3B3Q15393 1217 aaKnown RBP17.54■□□□□ 0.4
GHDC-203ENST00000428494 SBK1Q52WX2 424 aa17.54■□□□□ 0.4
GHDC-203ENST00000428494 KIAA0895Q8NCT3 520 aa17.54■□□□□ 0.4
GHDC-203ENST00000428494 MKNK2Q9HBH9 465 aa17.54■□□□□ 0.4
GHDC-203ENST00000428494 TCP11L1Q9NUJ3 509 aa17.54■□□□□ 0.4
GHDC-203ENST00000428494 BARHL2Q9NY43 387 aa17.54■□□□□ 0.4
GHDC-203ENST00000428494 MCM3P25205 808 aa17.53■□□□□ 0.4
GHDC-203ENST00000428494 GRM4Q14833 912 aa17.53■□□□□ 0.4
GHDC-203ENST00000428494 DGKHQ86XP1 1220 aa17.53■□□□□ 0.4
GHDC-203ENST00000428494 SMARCC1Q92922 1105 aaPredicted RBP17.53■□□□□ 0.4
GHDC-203ENST00000428494 EHD4Q9H223 541 aa17.53■□□□□ 0.4
GHDC-203ENST00000428494 MKRN1Q9UHC7 482 aaKnown RBP17.53■□□□□ 0.4
GHDC-203ENST00000428494 SPA17Q15506 151 aa17.53■□□□□ 0.4
GHDC-203ENST00000428494 C12orf60Q5U649 245 aa17.53■□□□□ 0.4
GHDC-203ENST00000428494 NFRKBQ6P4R8 1299 aa17.53■□□□□ 0.4
GHDC-203ENST00000428494 NOC3LQ8WTT2 800 aaKnown RBP17.53■□□□□ 0.4
GHDC-203ENST00000428494 RPGRIP1Q96KN7 1286 aa17.53■□□□□ 0.4
GHDC-203ENST00000428494 IFIH1Q9BYX4 1025 aaKnown RBP17.53■□□□□ 0.4
GHDC-203ENST00000428494 SNX12Q9UMY4 172 aa17.53■□□□□ 0.4
GHDC-203ENST00000428494 MYL1P05976 194 aa17.52■□□□□ 0.4
GHDC-203ENST00000428494 RETREG2Q8NC44 543 aa17.52■□□□□ 0.4
GHDC-203ENST00000428494 VAT1LQ9HCJ6 419 aa17.52■□□□□ 0.4
GHDC-203ENST00000428494 SALL4Q9UJQ4 1053 aa17.52■□□□□ 0.4
GHDC-203ENST00000428494 PCDHA13Q9Y5I0 950 aa17.52■□□□□ 0.4
GHDC-203ENST00000428494 ANO9A1A5B4 782 aa17.52■□□□□ 0.39
GHDC-203ENST00000428494 BICDL2A1A5D9 508 aa17.52■□□□□ 0.39
GHDC-203ENST00000428494 NCK2O43639 380 aa17.52■□□□□ 0.39
GHDC-203ENST00000428494 TSPY3P0CV98 308 aa17.52■□□□□ 0.39
GHDC-203ENST00000428494 TSPY8P0CW00 308 aa17.52■□□□□ 0.39
GHDC-203ENST00000428494 EIF4A3P38919 411 aaKnown RBP17.52■□□□□ 0.39
GHDC-203ENST00000428494 SND1Q7KZF4 910 aaKnown RBP eCLIP17.52■□□□□ 0.391e-6■■■■■ 31.1
GHDC-203ENST00000428494 SH3RF3Q8TEJ3 882 aaPredicted RBP17.52■□□□□ 0.39
GHDC-203ENST00000428494 ERGIC2Q96RQ1 377 aa17.52■□□□□ 0.39
GHDC-203ENST00000428494 MMTAG2Q9BU76 263 aaKnown RBP17.52■□□□□ 0.39
GHDC-203ENST00000428494 MMRN2Q9H8L6 949 aa17.52■□□□□ 0.39
GHDC-203ENST00000428494 KCNQ2O43526 872 aa17.51■□□□□ 0.39
GHDC-203ENST00000428494 OR52Z1P0C646 297 aa17.51■□□□□ 0.39
GHDC-203ENST00000428494 RPS8P62241 208 aaKnown RBP17.51■□□□□ 0.39
GHDC-203ENST00000428494 DIXDC1Q155Q3 683 aa17.51■□□□□ 0.39
GHDC-203ENST00000428494 DZIP1Q86YF9 867 aaKnown RBP17.51■□□□□ 0.39
GHDC-203ENST00000428494 ZSCAN29Q8IWY8 852 aaPredicted RBP17.51■□□□□ 0.39
GHDC-203ENST00000428494 CCDC155Q8N6L0 562 aa17.51■□□□□ 0.39
GHDC-203ENST00000428494 TMEM47Q9BQJ4 181 aa17.51■□□□□ 0.39
GHDC-203ENST00000428494 DOT1LQ8TEK3 1739 aa17.51■□□□□ 0.39
GHDC-203ENST00000428494 GOLGA6BA6NDN3 693 aa17.51■□□□□ 0.39
GHDC-203ENST00000428494 KLRF2D3W0D1 207 aa17.51■□□□□ 0.39
GHDC-203ENST00000428494 PPFIA4O75335 1185 aa17.51■□□□□ 0.39
GHDC-203ENST00000428494 NAPAP54920 295 aa17.51■□□□□ 0.39
GHDC-203ENST00000428494 GRIK5Q16478 980 aa17.51■□□□□ 0.39
GHDC-203ENST00000428494 TTC19Q6DKK2 380 aaPredicted RBP17.51■□□□□ 0.39
GHDC-203ENST00000428494 DYMQ7RTS9 669 aa17.51■□□□□ 0.39
GHDC-203ENST00000428494 AENQ8WTP8 325 aaKnown RBP17.51■□□□□ 0.39
GHDC-203ENST00000428494 C7orf25Q9BPX7 421 aa17.51■□□□□ 0.39
GHDC-203ENST00000428494 SAP30BPQ9UHR5 308 aaKnown RBP17.51■□□□□ 0.39
GHDC-203ENST00000428494 PLAGL2Q9UPG8 496 aa17.51■□□□□ 0.39
GHDC-203ENST00000428494 ZNF652Q9Y2D9 606 aa17.51■□□□□ 0.39
GHDC-203ENST00000428494 JRKLQ9Y4A0 524 aa17.51■□□□□ 0.39
GHDC-203ENST00000428494 KIF11P52732 1056 aa17.5■□□□□ 0.39
GHDC-203ENST00000428494 SPATA4Q8NEY3 305 aa17.5■□□□□ 0.39
GHDC-203ENST00000428494 SH2D4AQ9H788 454 aa17.5■□□□□ 0.39
GHDC-203ENST00000428494 BRD2P25440 801 aaKnown RBP17.5■□□□□ 0.39
GHDC-203ENST00000428494 PRPHP41219 470 aa17.5■□□□□ 0.39
GHDC-203ENST00000428494 TXKP42681 527 aa17.5■□□□□ 0.39
GHDC-203ENST00000428494 RRAGAQ7L523 313 aa17.5■□□□□ 0.39
GHDC-203ENST00000428494 MARCH10Q8NA82 808 aaPredicted RBP17.5■□□□□ 0.39
GHDC-203ENST00000428494 DAGLBQ8NCG7 672 aa17.5■□□□□ 0.39
GHDC-203ENST00000428494 GLIS3Q8NEA6 775 aa17.5■□□□□ 0.39
GHDC-203ENST00000428494 TRIM58Q8NG06 486 aa17.5■□□□□ 0.39
GHDC-203ENST00000428494 FAM184BQ9ULE4 1060 aa17.5■□□□□ 0.39
GHDC-203ENST00000428494 SCN7AQ01118 1682 aa17.49■□□□□ 0.39
GHDC-203ENST00000428494 GOLGA6CA6NDK9 693 aa17.49■□□□□ 0.39
GHDC-203ENST00000428494 SMCO2A6NFE2 343 aa17.49■□□□□ 0.39
GHDC-203ENST00000428494 GOLGA6DP0CG33 693 aa17.49■□□□□ 0.39
GHDC-203ENST00000428494 DDB1Q16531 1140 aa17.49■□□□□ 0.39
GHDC-203ENST00000428494 TBC1D9BQ66K14 1250 aa17.49■□□□□ 0.39
GHDC-203ENST00000428494 USP17L2Q6R6M4 530 aa17.49■□□□□ 0.39
GHDC-203ENST00000428494 PACS2Q86VP3 889 aa17.49■□□□□ 0.39
GHDC-203ENST00000428494 POTEDQ86YR6 584 aa17.49■□□□□ 0.39
GHDC-203ENST00000428494 FAM114A1Q8IWE2 563 aa17.49■□□□□ 0.39
GHDC-203ENST00000428494 TGFBRAP1Q8WUH2 860 aa17.49■□□□□ 0.39
GHDC-203ENST00000428494 CCDC47Q96A33 483 aaKnown RBP17.49■□□□□ 0.39
GHDC-203ENST00000428494 OSBPL9Q96SU4 736 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms