RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 CHUKO15111 745 aa17.75■□□□□ 0.43
PKP4-205ENST00000426248 GSCP56915 257 aaPredicted RBP17.75■□□□□ 0.43
PKP4-205ENST00000426248 ABCB5Q2M3G0 1257 aa17.75■□□□□ 0.43
PKP4-205ENST00000426248 NAPGQ99747 312 aaPredicted RBP17.75■□□□□ 0.43
PKP4-205ENST00000426248 TMEM47Q9BQJ4 181 aa17.75■□□□□ 0.43
PKP4-205ENST00000426248 UBXN6Q9BZV1 441 aa17.75■□□□□ 0.43
PKP4-205ENST00000426248 CTDNEP1O95476 244 aa17.75■□□□□ 0.43
PKP4-205ENST00000426248 SLC16A2P36021 539 aa17.75■□□□□ 0.43
PKP4-205ENST00000426248 NR5A1Q13285 461 aa17.75■□□□□ 0.43
PKP4-205ENST00000426248 MYSM1Q5VVJ2 828 aa17.75■□□□□ 0.43
PKP4-205ENST00000426248 ANKZF1Q9H8Y5 726 aa17.75■□□□□ 0.43
PKP4-205ENST00000426248 SUGT1Q9Y2Z0 365 aa17.75■□□□□ 0.43
PKP4-205ENST00000426248 AKR1B1P15121 316 aa17.74■□□□□ 0.43
PKP4-205ENST00000426248 MCM7P33993 719 aa17.74■□□□□ 0.43
PKP4-205ENST00000426248 KCTD16Q68DU8 428 aa17.74■□□□□ 0.43
PKP4-205ENST00000426248 B4GALNT4Q76KP1 1039 aa17.74■□□□□ 0.43
PKP4-205ENST00000426248 TRMT1LQ7Z2T5 733 aaKnown RBP17.74■□□□□ 0.43
PKP4-205ENST00000426248 SGMS1Q86VZ5 419 aa17.74■□□□□ 0.43
PKP4-205ENST00000426248 TRIM75PA6NK02 468 aa17.74■□□□□ 0.43
PKP4-205ENST00000426248 PNOCQ13519 176 aa17.74■□□□□ 0.43
PKP4-205ENST00000426248 PPP2R5BQ15173 497 aa17.74■□□□□ 0.43
PKP4-205ENST00000426248 KCTD1Q719H9 257 aa17.74■□□□□ 0.43
PKP4-205ENST00000426248 KCNG4Q8TDN1 519 aa17.74■□□□□ 0.43
PKP4-205ENST00000426248 PAPPAQ13219 1627 aa17.74■□□□□ 0.43
PKP4-205ENST00000426248 PPP1R12BO60237 982 aaPredicted RBP17.74■□□□□ 0.43
PKP4-205ENST00000426248 TSR1Q2NL82 804 aaKnown RBP17.74■□□□□ 0.43
PKP4-205ENST00000426248 ANO1Q5XXA6 986 aa17.74■□□□□ 0.43
PKP4-205ENST00000426248 DDAH1O94760 285 aa17.74■□□□□ 0.43
PKP4-205ENST00000426248 GUCY1A2P33402 732 aa17.74■□□□□ 0.43
PKP4-205ENST00000426248 TBC1D31Q96DN5 1066 aa17.74■□□□□ 0.43
PKP4-205ENST00000426248 UIMC1Q96RL1 719 aa17.74■□□□□ 0.43
PKP4-205ENST00000426248 RCOR1Q9UKL0 485 aa17.74■□□□□ 0.43
PKP4-205ENST00000426248 HPS5Q9UPZ3 1129 aa17.74■□□□□ 0.43
PKP4-205ENST00000426248 FAM205AQ6ZU69 1335 aa17.74■□□□□ 0.43
PKP4-205ENST00000426248 ENC1O14682 589 aa17.73■□□□□ 0.43
PKP4-205ENST00000426248 RASSF7Q02833 373 aa17.73■□□□□ 0.43
PKP4-205ENST00000426248 SBK1Q52WX2 424 aa17.73■□□□□ 0.43
PKP4-205ENST00000426248 RSBN1LQ6PCB5 846 aaPredicted RBP17.73■□□□□ 0.43
PKP4-205ENST00000426248 VSTM4Q8IW00 320 aa17.73■□□□□ 0.43
PKP4-205ENST00000426248 DHX36Q9H2U1 1008 aaKnown RBP17.73■□□□□ 0.43
PKP4-205ENST00000426248 MRPL44Q9H9J2 332 aaKnown RBP17.73■□□□□ 0.43
PKP4-205ENST00000426248 ORC4O43929 436 aa17.73■□□□□ 0.43
PKP4-205ENST00000426248 HHIPL2Q6UWX4 724 aa17.73■□□□□ 0.43
PKP4-205ENST00000426248 SND1Q7KZF4 910 aaKnown RBP eCLIP17.73■□□□□ 0.439e-9■□□□□ 8.6
PKP4-205ENST00000426248 FANCGO15287 622 aa17.73■□□□□ 0.43
PKP4-205ENST00000426248 FMNL1O95466 1100 aaPredicted RBP17.73■□□□□ 0.43
PKP4-205ENST00000426248 ZNF76P36508 570 aa17.73■□□□□ 0.43
PKP4-205ENST00000426248 PDCLQ13371 301 aa17.73■□□□□ 0.43
PKP4-205ENST00000426248 SPECC1LQ69YQ0 1117 aa17.73■□□□□ 0.43
PKP4-205ENST00000426248 DGKHQ86XP1 1220 aa17.73■□□□□ 0.43
PKP4-205ENST00000426248 AKR1B15C9JRZ8 316 aaPredicted RBP17.72■□□□□ 0.43
PKP4-205ENST00000426248 GH2P01242 217 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 CALML3P27482 149 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 TGFB2P61812 414 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 IFT88Q13099 833 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 SPATS2LQ9NUQ6 558 aaKnown RBP17.72■□□□□ 0.43
PKP4-205ENST00000426248 SALL1Q9NSC2 1324 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 TAF1P21675 1872 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 STX10O60499 249 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 KIF4AO95239 1232 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 NAP1L1P55209 391 aaKnown RBP17.72■□□□□ 0.43
PKP4-205ENST00000426248 STX17P56962 302 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 CXCL9Q07325 125 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 SMARCC2Q8TAQ2 1214 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 RASGRP4Q8TDF6 673 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 MIEF2Q96C03 454 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 IRAK4Q9NWZ3 460 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 CLIC4Q9Y696 253 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 IPO7O95373 1038 aaKnown RBP17.72■□□□□ 0.43
PKP4-205ENST00000426248 SCG2P13521 617 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 RASA1P20936 1047 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 MCM3P25205 808 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 DACT2Q5SW24 774 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 CCDC121Q6ZUS5 278 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 C15orf52Q6ZUT6 534 aaKnown RBP17.72■□□□□ 0.43
PKP4-205ENST00000426248 STAG2Q8N3U4 1231 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 NOA1Q8NC60 698 aaKnown RBP17.72■□□□□ 0.43
PKP4-205ENST00000426248 NFE2L3Q9Y4A8 694 aa17.72■□□□□ 0.43
PKP4-205ENST00000426248 PDS5AQ29RF7 1337 aaKnown RBP17.71■□□□□ 0.43
PKP4-205ENST00000426248 WDR19Q8NEZ3 1342 aa17.71■□□□□ 0.43
PKP4-205ENST00000426248 TTLL1O95922 423 aa17.71■□□□□ 0.43
PKP4-205ENST00000426248 MRPS25P82663 173 aaKnown RBP17.71■□□□□ 0.43
PKP4-205ENST00000426248 SEPT2Q15019 361 aa17.71■□□□□ 0.43
PKP4-205ENST00000426248 USH1GQ495M9 461 aa17.71■□□□□ 0.43
PKP4-205ENST00000426248 FILIP1LQ4L180 1135 aa17.71■□□□□ 0.43
PKP4-205ENST00000426248 FCHSD1Q86WN1 690 aa17.71■□□□□ 0.43
PKP4-205ENST00000426248 C6orf50Q9HD87 102 aa17.71■□□□□ 0.43
PKP4-205ENST00000426248 KCNJ6P48051 423 aa17.71■□□□□ 0.43
PKP4-205ENST00000426248 IRAK1P51617 712 aa17.71■□□□□ 0.43
PKP4-205ENST00000426248 SAMD7Q7Z3H4 446 aa17.71■□□□□ 0.43
PKP4-205ENST00000426248 MICAL1Q8TDZ2 1067 aa17.71■□□□□ 0.43
PKP4-205ENST00000426248 NUP88Q99567 741 aaPredicted RBP17.71■□□□□ 0.43
PKP4-205ENST00000426248 JADE2Q9NQC1 790 aa17.71■□□□□ 0.43
PKP4-205ENST00000426248 DDX4Q9NQI0 724 aaKnown RBP17.71■□□□□ 0.43
PKP4-205ENST00000426248 SWAP70Q9UH65 585 aa17.71■□□□□ 0.43
PKP4-205ENST00000426248 FDPSP14324 419 aaKnown RBP17.71■□□□□ 0.43
PKP4-205ENST00000426248 ARHGAP25P42331 645 aa17.71■□□□□ 0.43
PKP4-205ENST00000426248 CCDC17Q96LX7 622 aa17.71■□□□□ 0.43
PKP4-205ENST00000426248 RNF26Q9BY78 433 aaPredicted RBP17.71■□□□□ 0.43
PKP4-205ENST00000426248 KLRG2A4D1S0 409 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms