RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ZNFX1Q9P2E3 1918 aaKnown RBP14.44□□□□□ -0.1
HLA-DQB3-203ENST00000425319 SMCHD1A6NHR9 2005 aa14.44□□□□□ -0.1
HLA-DQB3-203ENST00000425319 ZNF536O15090 1300 aa14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 TNKSO95271 1327 aa14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 MYH8P13535 1937 aa14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 PARNO95453 639 aaKnown RBP14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 PCP11498 1178 aaKnown RBP14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 MX1P20591 662 aa14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 CALML3P27482 149 aa14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 KCNJ6P48051 423 aa14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 ALDH5A1P51649 535 aaPredicted RBP14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 PSMC6P62333 389 aa14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 CTDSPL2Q05D32 466 aa14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 MUM1L1Q5H9M0 696 aa14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 TSHZ3Q63HK5 1081 aa14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 DEFB128Q7Z7B8 93 aa14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 DNERQ8NFT8 737 aa14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 MORC4Q8TE76 937 aa14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 SCFD2Q8WU76 684 aa14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 SLC9A7Q96T83 725 aa14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 SEC62Q99442 399 aaKnown RBP14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 MAF1Q9H063 256 aa14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 RANBP17Q9H2T7 1088 aaKnown RBP14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 CXXC1Q9P0U4 656 aaPredicted RBP14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 COG5Q9UP83 839 aa14.43□□□□□ -0.1
HLA-DQB3-203ENST00000425319 COL6A3P12111 3177 aa14.42□□□□□ -0.1
HLA-DQB3-203ENST00000425319 ORC4O43929 436 aa14.42□□□□□ -0.1
HLA-DQB3-203ENST00000425319 NT5C2P49902 561 aa14.42□□□□□ -0.1
HLA-DQB3-203ENST00000425319 SNAP25P60880 206 aa14.42□□□□□ -0.1
HLA-DQB3-203ENST00000425319 TTLL4Q14679 1199 aa14.42□□□□□ -0.1
HLA-DQB3-203ENST00000425319 NFRKBQ6P4R8 1299 aa14.42□□□□□ -0.1
HLA-DQB3-203ENST00000425319 BTNL9Q6UXG8 535 aa14.42□□□□□ -0.1
HLA-DQB3-203ENST00000425319 SCLYQ96I15 445 aa14.42□□□□□ -0.1
HLA-DQB3-203ENST00000425319 ZBED2Q9BTP6 218 aa14.42□□□□□ -0.1
HLA-DQB3-203ENST00000425319 RNF41Q9H4P4 317 aaPredicted RBP14.42□□□□□ -0.1
HLA-DQB3-203ENST00000425319 GPCPD1Q9NPB8 672 aa14.42□□□□□ -0.1
HLA-DQB3-203ENST00000425319 TCP11L1Q9NUJ3 509 aa14.42□□□□□ -0.1
HLA-DQB3-203ENST00000425319 ANAPC4Q9UJX5 808 aa14.42□□□□□ -0.1
HLA-DQB3-203ENST00000425319 ASTN1O14525 1302 aa14.41□□□□□ -0.1
HLA-DQB3-203ENST00000425319 BAZ2AQ9UIF9 1905 aaKnown RBP14.41□□□□□ -0.1
HLA-DQB3-203ENST00000425319 TXNP10599 105 aaKnown RBP14.41□□□□□ -0.1
HLA-DQB3-203ENST00000425319 SLC16A2P36021 539 aa14.41□□□□□ -0.1
HLA-DQB3-203ENST00000425319 RABGGTBP53611 331 aa14.41□□□□□ -0.1
HLA-DQB3-203ENST00000425319 CHMP4BP1P59074 171 aa14.41□□□□□ -0.1
HLA-DQB3-203ENST00000425319 ALX1Q15699 326 aa14.41□□□□□ -0.1
HLA-DQB3-203ENST00000425319 GPATCH4Q5T3I0 446 aaKnown RBP14.41□□□□□ -0.1
HLA-DQB3-203ENST00000425319 MFSD6Q6ZSS7 791 aa14.41□□□□□ -0.1
HLA-DQB3-203ENST00000425319 PITPNM1O00562 1244 aa14.4□□□□□ -0.1
HLA-DQB3-203ENST00000425319 BAIAP3O94812 1187 aa14.4□□□□□ -0.1
HLA-DQB3-203ENST00000425319 CYP2C9P11712 490 aa14.4□□□□□ -0.1
HLA-DQB3-203ENST00000425319 CASTP20810 708 aaKnown RBP14.4□□□□□ -0.1
HLA-DQB3-203ENST00000425319 PURAQ00577 322 aaKnown RBP14.4□□□□□ -0.1
HLA-DQB3-203ENST00000425319 ADGRE1Q14246 886 aa14.4□□□□□ -0.1
HLA-DQB3-203ENST00000425319 NBPF20Q3BBV1 942 aa14.4□□□□□ -0.1
HLA-DQB3-203ENST00000425319 MCMDC2Q4G0Z9 681 aa14.4□□□□□ -0.1
HLA-DQB3-203ENST00000425319 C20orf194Q5TEA3 1177 aa14.4□□□□□ -0.1
HLA-DQB3-203ENST00000425319 ANKRD45Q5TZF3 282 aa14.4□□□□□ -0.1
HLA-DQB3-203ENST00000425319 MCF2L2Q86YR7 1114 aa14.4□□□□□ -0.1
HLA-DQB3-203ENST00000425319 CRBNQ96SW2 442 aa14.4□□□□□ -0.1
HLA-DQB3-203ENST00000425319 IL17RBQ9NRM6 502 aa14.4□□□□□ -0.1
HLA-DQB3-203ENST00000425319 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.4□□□□□ -0.1
HLA-DQB3-203ENST00000425319 YBX2Q9Y2T7 364 aaKnown RBP14.4□□□□□ -0.1
HLA-DQB3-203ENST00000425319 LAMA3Q16787 3333 aa14.4□□□□□ -0.1
HLA-DQB3-203ENST00000425319 GRIN2DO15399 1336 aa14.4□□□□□ -0.1
HLA-DQB3-203ENST00000425319 UMODL1Q5DID0 1318 aa14.4□□□□□ -0.1
HLA-DQB3-203ENST00000425319 RBM47A0AV96 593 aaKnown RBP14.39□□□□□ -0.11
HLA-DQB3-203ENST00000425319 NMT2O60551 498 aa14.39□□□□□ -0.11
HLA-DQB3-203ENST00000425319 RGS22Q8NE09 1264 aa14.39□□□□□ -0.11
HLA-DQB3-203ENST00000425319 CAGE1Q8TC20 777 aa14.39□□□□□ -0.11
HLA-DQB3-203ENST00000425319 PI4K2BQ8TCG2 481 aa14.39□□□□□ -0.11
HLA-DQB3-203ENST00000425319 ESR2Q92731 530 aa14.39□□□□□ -0.11
HLA-DQB3-203ENST00000425319 TMEM47Q9BQJ4 181 aa14.39□□□□□ -0.11
HLA-DQB3-203ENST00000425319 WNT8AQ9H1J5 351 aa14.39□□□□□ -0.11
HLA-DQB3-203ENST00000425319 TRMT13Q9NUP7 481 aaKnown RBP14.39□□□□□ -0.11
HLA-DQB3-203ENST00000425319 PLXNA1Q9UIW2 1896 aa14.39□□□□□ -0.11
HLA-DQB3-203ENST00000425319 FRMPD2Q68DX3 1309 aaPredicted RBP14.39□□□□□ -0.11
HLA-DQB3-203ENST00000425319 COL11A1P12107 1806 aaPredicted RBP14.38□□□□□ -0.11
HLA-DQB3-203ENST00000425319 A6NJR5 290 aa14.38□□□□□ -0.11
HLA-DQB3-203ENST00000425319 TLL1O43897 1013 aa14.38□□□□□ -0.11
HLA-DQB3-203ENST00000425319 IQCF3P0C7M6 154 aa14.38□□□□□ -0.11
HLA-DQB3-203ENST00000425319 RPS6P62753 249 aaKnown RBP14.38□□□□□ -0.11
HLA-DQB3-203ENST00000425319 TTBK2Q6IQ55 1244 aa14.38□□□□□ -0.11
HLA-DQB3-203ENST00000425319 IQCA1Q86XH1 822 aa14.38□□□□□ -0.11
HLA-DQB3-203ENST00000425319 FAM122AQ96E09 287 aa14.38□□□□□ -0.11
HLA-DQB3-203ENST00000425319 A0A0C4DFX4 3053 aa14.38□□□□□ -0.11
HLA-DQB3-203ENST00000425319 WDR19Q8NEZ3 1342 aa14.38□□□□□ -0.11
HLA-DQB3-203ENST00000425319 TRIM6-TRIM34B2RNG4 842 aa14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 NFIBO00712 420 aa14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 ZNF213O14771 459 aa14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 DHX16O60231 1041 aaKnown RBP14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 EFCAB14O75071 495 aa14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 GH1P01241 217 aa14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 FGAP02671 866 aa14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 CA3P07451 260 aa14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 FGRP09769 529 aa14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 POU3F3P20264 500 aaPredicted RBP14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 TRAF1Q13077 416 aa14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 STXBP2Q15833 593 aa14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 PTGISQ16647 500 aa14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 C7orf31Q8N865 590 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms