RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 SND1Q7KZF4 910 aaKnown RBP eCLIP6.5□□□□□ -1.37
VPS8-205ENST00000424721 NLRP8Q86W28 1048 aa6.5□□□□□ -1.37
VPS8-205ENST00000424721 TEX11Q8IYF3 940 aa6.5□□□□□ -1.37
VPS8-205ENST00000424721 ANKRD13CQ8N6S4 541 aa6.5□□□□□ -1.37
VPS8-205ENST00000424721 WDR18Q9BV38 432 aa6.5□□□□□ -1.37
VPS8-205ENST00000424721 SAP130Q9H0E3 1048 aa6.5□□□□□ -1.37
VPS8-205ENST00000424721 STIM2Q9P246 746 aa6.5□□□□□ -1.37
VPS8-205ENST00000424721 PA2G4Q9UQ80 394 aaKnown RBP6.5□□□□□ -1.37
VPS8-205ENST00000424721 RPTORQ8N122 1335 aa6.5□□□□□ -1.37
VPS8-205ENST00000424721 HMGCRP04035 888 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 ADORA1P30542 326 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 MAPK4P31152 587 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 HOXA7P31268 230 aaPredicted RBP6.49□□□□□ -1.37
VPS8-205ENST00000424721 FXR1P51114 621 aaKnown RBP eCLIP6.49□□□□□ -1.37
VPS8-205ENST00000424721 USP14P54578 494 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 BACE1P56817 501 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 CCNA1P78396 465 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 ATP8B2P98198 1209 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 HSP90AB4PQ58FF6 505 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 FOXR1Q6PIV2 292 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 TTC6Q86TZ1 520 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 GPRC5AQ8NFJ5 357 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 FRAT1Q92837 279 aaPredicted RBP6.49□□□□□ -1.37
VPS8-205ENST00000424721 NSUN4Q96CB9 384 aaKnown RBP6.49□□□□□ -1.37
VPS8-205ENST00000424721 SUSD3Q96L08 255 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 DEFB118Q96PH6 123 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 MEIS3Q99687 375 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 CHMP4BQ9H444 224 aaKnown RBP6.49□□□□□ -1.37
VPS8-205ENST00000424721 CABP5Q9NP86 173 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 FAM13BQ9NYF5 915 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 KLK14Q9P0G3 267 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 HMG20BQ9P0W2 317 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 LRFN2Q9ULH4 789 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 GABRQQ9UN88 632 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 ADGRA2Q96PE1 1338 aa6.49□□□□□ -1.37
VPS8-205ENST00000424721 KIAA0100Q14667 2235 aaKnown RBP6.48□□□□□ -1.37
VPS8-205ENST00000424721 TNFRSF10BO14763 440 aa6.48□□□□□ -1.37
VPS8-205ENST00000424721 SURF6O75683 361 aaKnown RBP6.48□□□□□ -1.37
VPS8-205ENST00000424721 XRCC5P13010 732 aaKnown RBP6.48□□□□□ -1.37
VPS8-205ENST00000424721 EPB42P16452 691 aa6.48□□□□□ -1.37
VPS8-205ENST00000424721 HMGCS2P54868 508 aa6.48□□□□□ -1.37
VPS8-205ENST00000424721 RHBDL3P58872 404 aa6.48□□□□□ -1.37
VPS8-205ENST00000424721 CAP1Q01518 475 aa6.48□□□□□ -1.37
VPS8-205ENST00000424721 MAP3K12Q12852 859 aa6.48□□□□□ -1.37
VPS8-205ENST00000424721 UBAP2LQ14157 1087 aaKnown RBP6.48□□□□□ -1.37
VPS8-205ENST00000424721 ZKSCAN2Q63HK3 967 aa6.48□□□□□ -1.37
VPS8-205ENST00000424721 ERC1Q8IUD2 1116 aa6.48□□□□□ -1.37
VPS8-205ENST00000424721 FTSJ3Q8IY81 847 aaKnown RBP6.48□□□□□ -1.37
VPS8-205ENST00000424721 SOCS4Q8WXH5 440 aa6.48□□□□□ -1.37
VPS8-205ENST00000424721 HSH2DQ96JZ2 352 aa6.48□□□□□ -1.37
VPS8-205ENST00000424721 ZNF512BQ96KM6 892 aaPredicted RBP6.48□□□□□ -1.37
VPS8-205ENST00000424721 COL25A1Q9BXS0 654 aaPredicted RBP6.48□□□□□ -1.37
VPS8-205ENST00000424721 ASCC2Q9H1I8 757 aaPredicted RBP6.48□□□□□ -1.37
VPS8-205ENST00000424721 ANO2Q9NQ90 1003 aa6.48□□□□□ -1.37
VPS8-205ENST00000424721 AK9Q5TCS8 1911 aa6.48□□□□□ -1.37
VPS8-205ENST00000424721 ZNF646O15015 1829 aaPredicted RBP6.48□□□□□ -1.37
VPS8-205ENST00000424721 ATRNL1Q5VV63 1379 aa6.47□□□□□ -1.37
VPS8-205ENST00000424721 ELNP15502 786 aa6.47□□□□□ -1.37
VPS8-205ENST00000424721 NPR3P17342 541 aa6.47□□□□□ -1.37
VPS8-205ENST00000424721 MPSTP25325 297 aa6.47□□□□□ -1.37
VPS8-205ENST00000424721 CTGFP29279 349 aa6.47□□□□□ -1.37
VPS8-205ENST00000424721 BMP8BP34820 402 aa6.47□□□□□ -1.37
VPS8-205ENST00000424721 USP5P45974 858 aa6.47□□□□□ -1.37
VPS8-205ENST00000424721 MTMR3Q13615 1198 aa6.47□□□□□ -1.37
VPS8-205ENST00000424721 TTF1Q15361 905 aaPredicted RBP6.47□□□□□ -1.37
VPS8-205ENST00000424721 RNFT1Q5M7Z0 435 aa6.47□□□□□ -1.37
VPS8-205ENST00000424721 SAMD5Q5TGI4 173 aa6.47□□□□□ -1.37
VPS8-205ENST00000424721 LRRC69Q6ZNQ3 347 aa6.47□□□□□ -1.37
VPS8-205ENST00000424721 UBE2Q1Q7Z7E8 422 aa6.47□□□□□ -1.37
VPS8-205ENST00000424721 TGFBRAP1Q8WUH2 860 aa6.47□□□□□ -1.37
VPS8-205ENST00000424721 IFT43Q96FT9 208 aa6.47□□□□□ -1.37
VPS8-205ENST00000424721 PAWRQ96IZ0 340 aaKnown RBP6.47□□□□□ -1.37
VPS8-205ENST00000424721 TRERF1Q96PN7 1200 aa6.47□□□□□ -1.37
VPS8-205ENST00000424721 P2RX7Q99572 595 aaKnown RBP6.47□□□□□ -1.37
VPS8-205ENST00000424721 ZCCHC2Q9C0B9 1178 aaKnown RBP6.47□□□□□ -1.37
VPS8-205ENST00000424721 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.47□□□□□ -1.37
VPS8-205ENST00000424721 DDX4Q9NQI0 724 aaKnown RBP6.47□□□□□ -1.37
VPS8-205ENST00000424721 PAK6Q9NQU5 681 aaPredicted RBP6.47□□□□□ -1.37
VPS8-205ENST00000424721 SLC5A4Q9NY91 659 aa6.47□□□□□ -1.37
VPS8-205ENST00000424721 HOXC10Q9NYD6 342 aa6.47□□□□□ -1.37
VPS8-205ENST00000424721 MORF4L1Q9UBU8 362 aa6.47□□□□□ -1.37
VPS8-205ENST00000424721 BNIP3LO60238 219 aa6.46□□□□□ -1.38
VPS8-205ENST00000424721 MSCO60682 206 aa6.46□□□□□ -1.38
VPS8-205ENST00000424721 CYP2B6P20813 491 aa6.46□□□□□ -1.38
VPS8-205ENST00000424721 CYP7A1P22680 504 aa6.46□□□□□ -1.38
VPS8-205ENST00000424721 RGS2P41220 211 aa6.46□□□□□ -1.38
VPS8-205ENST00000424721 ARSDP51689 593 aa6.46□□□□□ -1.38
VPS8-205ENST00000424721 KRT76Q01546 638 aa6.46□□□□□ -1.38
VPS8-205ENST00000424721 GAS6Q14393 721 aa6.46□□□□□ -1.38
VPS8-205ENST00000424721 CERKLQ49MI3 558 aaPredicted RBP6.46□□□□□ -1.38
VPS8-205ENST00000424721 TNNI3KQ59H18 835 aa6.46□□□□□ -1.38
VPS8-205ENST00000424721 TREML2Q5T2D2 321 aa6.46□□□□□ -1.38
VPS8-205ENST00000424721 MFSD14CQ5VZR4 134 aa6.46□□□□□ -1.38
VPS8-205ENST00000424721 PLEKHH3Q7Z736 793 aa6.46□□□□□ -1.38
VPS8-205ENST00000424721 METTL16Q86W50 562 aaKnown RBP6.46□□□□□ -1.38
VPS8-205ENST00000424721 TREML1Q86YW5 311 aa6.46□□□□□ -1.38
VPS8-205ENST00000424721 AMOTL1Q8IY63 956 aa6.46□□□□□ -1.38
VPS8-205ENST00000424721 SLC17A8Q8NDX2 589 aa6.46□□□□□ -1.38
VPS8-205ENST00000424721 SSH3Q8TE77 659 aa6.46□□□□□ -1.38
VPS8-205ENST00000424721 SH3RF3Q8TEJ3 882 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms