RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 GJA10Q969M2 543 aa15.39■□□□□ 0.05
PRPF39-202ENST00000424478 PARK7Q99497 189 aaKnown RBP15.39■□□□□ 0.05
PRPF39-202ENST00000424478 CLIC4Q9Y696 253 aa15.39■□□□□ 0.05
PRPF39-202ENST00000424478 U2AF2P26368 475 aaKnown RBP eCLIP15.38■□□□□ 0.051e-6■■■■□ 20.8
PRPF39-202ENST00000424478 HHIPL1Q96JK4 782 aa15.38■□□□□ 0.05
PRPF39-202ENST00000424478 USP28Q96RU2 1077 aa15.38■□□□□ 0.05
PRPF39-202ENST00000424478 A1CFQ9NQ94 594 aaKnown RBP15.38■□□□□ 0.05
PRPF39-202ENST00000424478 MRPL11Q9Y3B7 192 aaKnown RBP15.38■□□□□ 0.05
PRPF39-202ENST00000424478 PCDHB6Q9Y5E3 794 aa15.38■□□□□ 0.05
PRPF39-202ENST00000424478 CCDC12Q8WUD4 166 aaPredicted RBP15.38■□□□□ 0.05
PRPF39-202ENST00000424478 MYH7BA7E2Y1 1941 aa15.38■□□□□ 0.05
PRPF39-202ENST00000424478 CCDC194A0A1B0GVG4 234 aa15.38■□□□□ 0.05
PRPF39-202ENST00000424478 GNA11P29992 359 aa15.38■□□□□ 0.05
PRPF39-202ENST00000424478 CAP1Q01518 475 aa15.38■□□□□ 0.05
PRPF39-202ENST00000424478 SREBF2Q12772 1141 aa15.38■□□□□ 0.05
PRPF39-202ENST00000424478 MYSM1Q5VVJ2 828 aa15.38■□□□□ 0.05
PRPF39-202ENST00000424478 IL31RAQ8NI17 732 aa15.38■□□□□ 0.05
PRPF39-202ENST00000424478 TBCKQ8TEA7 893 aa15.38■□□□□ 0.05
PRPF39-202ENST00000424478 TAAR1Q96RJ0 339 aa15.38■□□□□ 0.05
PRPF39-202ENST00000424478 BRMS1Q9HCU9 246 aa15.38■□□□□ 0.05
PRPF39-202ENST00000424478 ABCB11O95342 1321 aa15.38■□□□□ 0.05
PRPF39-202ENST00000424478 EDIL3O43854 480 aa15.37■□□□□ 0.05
PRPF39-202ENST00000424478 MRPL12P52815 198 aaKnown RBP15.37■□□□□ 0.05
PRPF39-202ENST00000424478 ZNF174Q15697 407 aa15.37■□□□□ 0.05
PRPF39-202ENST00000424478 RNF207Q6ZRF8 634 aa15.37■□□□□ 0.05
PRPF39-202ENST00000424478 ANKRD35Q8N283 1001 aa15.37■□□□□ 0.05
PRPF39-202ENST00000424478 ARHGAP39Q9C0H5 1083 aa15.37■□□□□ 0.05
PRPF39-202ENST00000424478 RABGAP1Q9Y3P9 1069 aa15.37■□□□□ 0.05
PRPF39-202ENST00000424478 MYPNQ86TC9 1320 aa15.37■□□□□ 0.05
PRPF39-202ENST00000424478 EIF2AK2P19525 551 aaKnown RBP15.37■□□□□ 0.05
PRPF39-202ENST00000424478 LETM2Q2VYF4 491 aa15.37■□□□□ 0.05
PRPF39-202ENST00000424478 GPRC5AQ8NFJ5 357 aa15.37■□□□□ 0.05
PRPF39-202ENST00000424478 FOXP1Q9H334 677 aaPredicted RBP15.37■□□□□ 0.05
PRPF39-202ENST00000424478 GCOM1H8Y6P7 765 aaPredicted RBP15.36■□□□□ 0.05
PRPF39-202ENST00000424478 BAG4O95429 457 aaKnown RBP15.36■□□□□ 0.05
PRPF39-202ENST00000424478 POLR2MP0CAP2 368 aa15.36■□□□□ 0.05
PRPF39-202ENST00000424478 TM4SF4P48230 202 aa15.36■□□□□ 0.05
PRPF39-202ENST00000424478 CLK2P49760 499 aaKnown RBP15.36■□□□□ 0.05
PRPF39-202ENST00000424478 CYP2W1Q8TAV3 490 aa15.36■□□□□ 0.05
PRPF39-202ENST00000424478 MCM7P33993 719 aa15.36■□□□□ 0.05
PRPF39-202ENST00000424478 RIOX2Q8IUF8 465 aa15.36■□□□□ 0.05
PRPF39-202ENST00000424478 ANO3Q9BYT9 981 aa15.36■□□□□ 0.05
PRPF39-202ENST00000424478 ACAD9Q9H845 621 aa15.36■□□□□ 0.05
PRPF39-202ENST00000424478 ASTN1O14525 1302 aa15.36■□□□□ 0.05
PRPF39-202ENST00000424478 ESYT2A0FGR8 921 aa15.36■□□□□ 0.05
PRPF39-202ENST00000424478 TDP2O95551 362 aa15.36■□□□□ 0.05
PRPF39-202ENST00000424478 CTGFP29279 349 aa15.36■□□□□ 0.05
PRPF39-202ENST00000424478 CCAR1Q8IX12 1150 aaKnown RBP15.36■□□□□ 0.05
PRPF39-202ENST00000424478 SYTL5Q8TDW5 730 aaPredicted RBP15.36■□□□□ 0.05
PRPF39-202ENST00000424478 MYH15Q9Y2K3 1946 aa15.35■□□□□ 0.05
PRPF39-202ENST00000424478 hCG_1984214I3L0E3 225 aa15.35■□□□□ 0.05
PRPF39-202ENST00000424478 HSPA6P17066 643 aa15.35■□□□□ 0.05
PRPF39-202ENST00000424478 PPP1R18Q6NYC8 613 aa15.35■□□□□ 0.05
PRPF39-202ENST00000424478 ZNF713Q8N859 430 aaPredicted RBP15.35■□□□□ 0.05
PRPF39-202ENST00000424478 MB21D1Q8N884 522 aa15.35■□□□□ 0.05
PRPF39-202ENST00000424478 CYP39A1Q9NYL5 469 aa15.35■□□□□ 0.05
PRPF39-202ENST00000424478 RTEL1Q9NZ71 1219 aa15.35■□□□□ 0.05
PRPF39-202ENST00000424478 SPDYE3A6NKU9 549 aa15.35■□□□□ 0.05
PRPF39-202ENST00000424478 TLR2O60603 784 aa15.35■□□□□ 0.05
PRPF39-202ENST00000424478 MARCKSP29966 332 aaPredicted RBP15.35■□□□□ 0.05
PRPF39-202ENST00000424478 DAGLBQ8NCG7 672 aa15.35■□□□□ 0.05
PRPF39-202ENST00000424478 LCTP09848 1927 aa15.35■□□□□ 0.05
PRPF39-202ENST00000424478 ATP2A1O14983 1001 aa15.34■□□□□ 0.05
PRPF39-202ENST00000424478 SF3A1Q15459 793 aaKnown RBP15.34■□□□□ 0.05
PRPF39-202ENST00000424478 ADGRA2Q96PE1 1338 aa15.34■□□□□ 0.05
PRPF39-202ENST00000424478 OAZ1P54368 228 aa15.34■□□□□ 0.05
PRPF39-202ENST00000424478 NONOQ15233 471 aaKnown RBP eCLIP15.34■□□□□ 0.05
PRPF39-202ENST00000424478 ZSCAN16Q9H4T2 348 aaPredicted RBP15.34■□□□□ 0.05
PRPF39-202ENST00000424478 SLC45A1Q9Y2W3 748 aa15.34■□□□□ 0.05
PRPF39-202ENST00000424478 MCM3APO60318 1980 aa15.34■□□□□ 0.05
PRPF39-202ENST00000424478 ZNFX1Q9P2E3 1918 aaKnown RBP15.34■□□□□ 0.05
PRPF39-202ENST00000424478 CCNT1O60563 726 aaKnown RBP15.34■□□□□ 0.05
PRPF39-202ENST00000424478 MYCLP12524 364 aaPredicted RBP15.34■□□□□ 0.05
PRPF39-202ENST00000424478 INHBEP58166 350 aa15.34■□□□□ 0.05
PRPF39-202ENST00000424478 EEPD1Q7L9B9 569 aa15.34■□□□□ 0.05
PRPF39-202ENST00000424478 ZFYVE28Q9HCC9 887 aa15.34■□□□□ 0.05
PRPF39-202ENST00000424478 RNF186Q9NXI6 227 aa15.34■□□□□ 0.05
PRPF39-202ENST00000424478 PKD2L1Q9P0L9 805 aa15.34■□□□□ 0.05
PRPF39-202ENST00000424478 SORBS3O60504 671 aa15.33■□□□□ 0.04
PRPF39-202ENST00000424478 FDX1P10109 184 aa15.33■□□□□ 0.04
PRPF39-202ENST00000424478 BCRP11274 1271 aa15.33■□□□□ 0.04
PRPF39-202ENST00000424478 HSD17B4P51659 736 aa15.33■□□□□ 0.04
PRPF39-202ENST00000424478 C17orf99Q6UX52 265 aa15.33■□□□□ 0.04
PRPF39-202ENST00000424478 BICD2Q8TD16 824 aa15.33■□□□□ 0.04
PRPF39-202ENST00000424478 SLC37A4O43826 429 aa15.33■□□□□ 0.04
PRPF39-202ENST00000424478 GRIN1Q05586 938 aa15.33■□□□□ 0.04
PRPF39-202ENST00000424478 BRAPQ7Z569 592 aa15.33■□□□□ 0.04
PRPF39-202ENST00000424478 RMDN3Q96TC7 470 aa15.33■□□□□ 0.04
PRPF39-202ENST00000424478 CA12O43570 354 aa15.32■□□□□ 0.04
PRPF39-202ENST00000424478 PTGS1P23219 599 aa15.32■□□□□ 0.04
PRPF39-202ENST00000424478 GCLCP48506 637 aaPredicted RBP15.32■□□□□ 0.04
PRPF39-202ENST00000424478 SPECC1Q5M775 1068 aa15.32■□□□□ 0.04
PRPF39-202ENST00000424478 TTC38Q5R3I4 469 aa15.32■□□□□ 0.04
PRPF39-202ENST00000424478 MMP19Q99542 508 aa15.32■□□□□ 0.04
PRPF39-202ENST00000424478 TMEM60Q9H2L4 133 aa15.32■□□□□ 0.04
PRPF39-202ENST00000424478 GADD45BO75293 160 aaPredicted RBP15.32■□□□□ 0.04
PRPF39-202ENST00000424478 ARHGAP4P98171 946 aa15.32■□□□□ 0.04
PRPF39-202ENST00000424478 FAM110CQ1W6H9 321 aa15.32■□□□□ 0.04
PRPF39-202ENST00000424478 KRT25Q7Z3Z0 450 aa15.32■□□□□ 0.04
PRPF39-202ENST00000424478 GPR142Q7Z601 462 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms