RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 H3BNC9 293 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 IDH1O75874 414 aaKnown RBP7.65□□□□□ -1.18
SDCBP-203ENST00000424270 UPP2O95045 317 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 CTNNB1P35222 781 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 LTBRP36941 435 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 PLCD1P51178 756 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 PLXNA3P51805 1871 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 PTGISQ16647 500 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 CCDC158Q5M9N0 1113 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 KIAA1211Q6ZU35 1233 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 LRRC8DQ7L1W4 858 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 FBXO16Q8IX29 292 aaPredicted RBP7.65□□□□□ -1.18
SDCBP-203ENST00000424270 TMEM192Q8IY95 271 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 AFAP1L1Q8TED9 768 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 RAD50Q92878 1312 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 RIPOR3Q96MK2 946 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 CDK5RAP2Q96SN8 1893 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 SLF1Q9BQI6 1058 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 USP44Q9H0E7 712 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 RAVER2Q9HCJ3 691 aaKnown RBP7.65□□□□□ -1.18
SDCBP-203ENST00000424270 ALG13Q9NP73 1137 aaKnown RBP7.65□□□□□ -1.18
SDCBP-203ENST00000424270 MCM9Q9NXL9 1143 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 HDAC5Q9UQL6 1122 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 COG6Q9Y2V7 657 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 TMX2Q9Y320 296 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 RIPK3Q9Y572 518 aa7.65□□□□□ -1.18
SDCBP-203ENST00000424270 TECTAO75443 2155 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 SCN5AQ14524 2016 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 DNAJC25-GNG10A0A024R161 153 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 USP17L12C9JPN9 530 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 USP17L21D6R901 530 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 LINC01565O15544 149 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 TBX10O75333 385 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 LMNAP02545 664 aaKnown RBP7.64□□□□□ -1.19
SDCBP-203ENST00000424270 SELPP16109 830 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 SP100P23497 879 aaPredicted RBP7.64□□□□□ -1.19
SDCBP-203ENST00000424270 ARID4AP29374 1257 aaPredicted RBP7.64□□□□□ -1.19
SDCBP-203ENST00000424270 NKX3-2P78367 333 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 CNTN2Q02246 1040 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 DMWDQ09019 674 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 HYAL1Q12794 435 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 PTPN21Q16825 1174 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 IQSEC1Q6DN90 963 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 FBXO11Q86XK2 927 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 OR6J1Q8NGC5 347 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 CAGE1Q8TC20 777 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 KIFC2Q96AC6 838 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 ASIC4Q96FT7 647 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 PHF12Q96QT6 1004 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 PDGFCQ9NRA1 345 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 GNEQ9Y223 722 aaKnown RBP7.64□□□□□ -1.19
SDCBP-203ENST00000424270 BRWD1Q9NSI6 2320 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 ZNFX1Q9P2E3 1918 aaKnown RBP7.64□□□□□ -1.19
SDCBP-203ENST00000424270 BAHCC1Q9P281 2608 aa7.64□□□□□ -1.19
SDCBP-203ENST00000424270 LOC730098B7Z3J9 87 aa7.63□□□□□ -1.19
SDCBP-203ENST00000424270 PARNO95453 639 aaKnown RBP7.63□□□□□ -1.19
SDCBP-203ENST00000424270 EEF2P13639 858 aaKnown RBP7.63□□□□□ -1.19
SDCBP-203ENST00000424270 ICAM3P32942 547 aa7.63□□□□□ -1.19
SDCBP-203ENST00000424270 GTF2F1P35269 517 aaKnown RBP eCLIP7.63□□□□□ -1.19
SDCBP-203ENST00000424270 PURAQ00577 322 aaKnown RBP7.63□□□□□ -1.19
SDCBP-203ENST00000424270 RSPO4Q2I0M5 234 aaPredicted RBP7.63□□□□□ -1.19
SDCBP-203ENST00000424270 NFRKBQ6P4R8 1299 aa7.63□□□□□ -1.19
SDCBP-203ENST00000424270 AMOTL1Q8IY63 956 aa7.63□□□□□ -1.19
SDCBP-203ENST00000424270 TMEM105Q8N8V8 129 aa7.63□□□□□ -1.19
SDCBP-203ENST00000424270 CHST13Q8NET6 341 aa7.63□□□□□ -1.19
SDCBP-203ENST00000424270 FLCNQ8NFG4 579 aa7.63□□□□□ -1.19
SDCBP-203ENST00000424270 NUP88Q99567 741 aaPredicted RBP7.63□□□□□ -1.19
SDCBP-203ENST00000424270 C11orf84Q9BUA3 381 aaPredicted RBP7.63□□□□□ -1.19
SDCBP-203ENST00000424270 PHF7Q9BWX1 381 aaPredicted RBP7.63□□□□□ -1.19
SDCBP-203ENST00000424270 TSHZ2Q9NRE2 1034 aa7.63□□□□□ -1.19
SDCBP-203ENST00000424270 SH2B1Q9NRF2 756 aaPredicted RBP7.63□□□□□ -1.19
SDCBP-203ENST00000424270 ADAMTS5Q9UNA0 930 aa7.63□□□□□ -1.19
SDCBP-203ENST00000424270 Q9Y3F1 56 aa7.63□□□□□ -1.19
SDCBP-203ENST00000424270 SIP14410 1827 aa7.63□□□□□ -1.19
SDCBP-203ENST00000424270 CACNA1FO60840 1977 aa7.62□□□□□ -1.19
SDCBP-203ENST00000424270 EPG5Q9HCE0 2579 aa7.62□□□□□ -1.19
SDCBP-203ENST00000424270 AKR1B1P15121 316 aa7.62□□□□□ -1.19
SDCBP-203ENST00000424270 RFX1P22670 979 aa7.62□□□□□ -1.19
SDCBP-203ENST00000424270 RRP1P56182 461 aaKnown RBP7.62□□□□□ -1.19
SDCBP-203ENST00000424270 PTPN11Q06124 597 aaPredicted RBP7.62□□□□□ -1.19
SDCBP-203ENST00000424270 IKQ13123 557 aaPredicted RBP7.62□□□□□ -1.19
SDCBP-203ENST00000424270 MTMR3Q13615 1198 aa7.62□□□□□ -1.19
SDCBP-203ENST00000424270 KIAA0319Q5VV43 1072 aa7.62□□□□□ -1.19
SDCBP-203ENST00000424270 ASTLQ6HA08 431 aaPredicted RBP7.62□□□□□ -1.19
SDCBP-203ENST00000424270 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.62□□□□□ -1.19
SDCBP-203ENST00000424270 FIBCD1Q8N539 461 aa7.62□□□□□ -1.19
SDCBP-203ENST00000424270 FAM133AQ8N9E0 248 aa7.62□□□□□ -1.19
SDCBP-203ENST00000424270 PRPF38AQ8NAV1 312 aaKnown RBP7.62□□□□□ -1.19
SDCBP-203ENST00000424270 CYP2W1Q8TAV3 490 aa7.62□□□□□ -1.19
SDCBP-203ENST00000424270 HAUS7Q99871 368 aa7.62□□□□□ -1.19
SDCBP-203ENST00000424270 CRNKL1Q9BZJ0 848 aaKnown RBP7.62□□□□□ -1.19
SDCBP-203ENST00000424270 KATNBL1Q9H079 304 aa7.62□□□□□ -1.19
SDCBP-203ENST00000424270 ACAD9Q9H845 621 aa7.62□□□□□ -1.19
SDCBP-203ENST00000424270 COPRSQ9NQ92 184 aa7.62□□□□□ -1.19
SDCBP-203ENST00000424270 SWAP70Q9UH65 585 aa7.62□□□□□ -1.19
SDCBP-203ENST00000424270 USP15Q9Y4E8 981 aaPredicted RBP7.62□□□□□ -1.19
SDCBP-203ENST00000424270 COL11A1P12107 1806 aaPredicted RBP7.62□□□□□ -1.19
SDCBP-203ENST00000424270 PTPRCP08575 1304 aa7.61□□□□□ -1.19
SDCBP-203ENST00000424270 SRGAP3O43295 1099 aa7.61□□□□□ -1.19
SDCBP-203ENST00000424270 KPNA6O60684 536 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms