RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 RRAGBQ5VZM2 374 aa18.65■□□□□ 0.58
CMTM3-202ENST00000424011 MCTP2Q6DN12 878 aa18.65■□□□□ 0.58
CMTM3-202ENST00000424011 PAXIP1Q6ZW49 1069 aaPredicted RBP18.65■□□□□ 0.58
CMTM3-202ENST00000424011 C16orf45Q96MC5 204 aaPredicted RBP18.65■□□□□ 0.58
CMTM3-202ENST00000424011 NAP1L4Q99733 375 aaKnown RBP18.65■□□□□ 0.58
CMTM3-202ENST00000424011 CUEDC2Q9H467 287 aa18.65■□□□□ 0.58
CMTM3-202ENST00000424011 RMND1Q9NWS8 449 aa18.65■□□□□ 0.58
CMTM3-202ENST00000424011 SRCAPQ6ZRS2 3230 aa18.64■□□□□ 0.57
CMTM3-202ENST00000424011 MYH4Q9Y623 1939 aa18.64■□□□□ 0.57
CMTM3-202ENST00000424011 SERPINC1P01008 464 aa18.64■□□□□ 0.57
CMTM3-202ENST00000424011 ARMCX5Q6P1M9 558 aa18.64■□□□□ 0.57
CMTM3-202ENST00000424011 MAGEF1Q9HAY2 307 aa18.64■□□□□ 0.57
CMTM3-202ENST00000424011 VEZTQ9HBM0 779 aa18.64■□□□□ 0.57
CMTM3-202ENST00000424011 TMEM260Q9NX78 707 aa18.64■□□□□ 0.57
CMTM3-202ENST00000424011 USP27XA6NNY8 438 aa18.63■□□□□ 0.57
CMTM3-202ENST00000424011 NDUFB10O96000 172 aa18.63■□□□□ 0.57
CMTM3-202ENST00000424011 CLK2P49760 499 aaKnown RBP18.63■□□□□ 0.57
CMTM3-202ENST00000424011 SEMA3FQ13275 785 aa18.63■□□□□ 0.57
CMTM3-202ENST00000424011 SHROOM1Q2M3G4 852 aaPredicted RBP18.63■□□□□ 0.57
CMTM3-202ENST00000424011 MED15Q96RN5 788 aa18.63■□□□□ 0.57
CMTM3-202ENST00000424011 TULP2O00295 520 aa18.63■□□□□ 0.57
CMTM3-202ENST00000424011 BMP3P12645 472 aa18.63■□□□□ 0.57
CMTM3-202ENST00000424011 CDC37Q16543 378 aaPredicted RBP18.63■□□□□ 0.57
CMTM3-202ENST00000424011 QRICH1Q2TAL8 776 aa18.63■□□□□ 0.57
CMTM3-202ENST00000424011 TRMT44Q8IYL2 757 aaKnown RBP18.63■□□□□ 0.57
CMTM3-202ENST00000424011 SYT17Q9BSW7 474 aa18.63■□□□□ 0.57
CMTM3-202ENST00000424011 PCDHA1Q9Y5I3 950 aa18.63■□□□□ 0.57
CMTM3-202ENST00000424011 CNTNAP1P78357 1384 aa18.63■□□□□ 0.57
CMTM3-202ENST00000424011 RPS12P25398 132 aaKnown RBP18.62■□□□□ 0.57
CMTM3-202ENST00000424011 KARSQ15046 597 aaKnown RBP18.62■□□□□ 0.57
CMTM3-202ENST00000424011 TPD52L1Q16890 204 aaPredicted RBP18.62■□□□□ 0.57
CMTM3-202ENST00000424011 HSP90AA4PQ58FG1 418 aa18.62■□□□□ 0.57
CMTM3-202ENST00000424011 PPP4R3AQ6IN85 833 aa18.62■□□□□ 0.57
CMTM3-202ENST00000424011 RAB34Q9BZG1 259 aa18.62■□□□□ 0.57
CMTM3-202ENST00000424011 GCFC2P16383 781 aaKnown RBP18.62■□□□□ 0.57
CMTM3-202ENST00000424011 TNNI2P48788 182 aa18.62■□□□□ 0.57
CMTM3-202ENST00000424011 TRAF1Q13077 416 aa18.62■□□□□ 0.57
CMTM3-202ENST00000424011 CALCRLQ16602 461 aa18.62■□□□□ 0.57
CMTM3-202ENST00000424011 TMEM266Q2M3C6 531 aa18.62■□□□□ 0.57
CMTM3-202ENST00000424011 CCDC150Q8NCX0 1101 aa18.62■□□□□ 0.57
CMTM3-202ENST00000424011 ZBED3Q96IU2 234 aaPredicted RBP18.62■□□□□ 0.57
CMTM3-202ENST00000424011 AMNQ9BXJ7 453 aa18.62■□□□□ 0.57
CMTM3-202ENST00000424011 GOPCQ9HD26 462 aa18.62■□□□□ 0.57
CMTM3-202ENST00000424011 CALCOCO1Q9P1Z2 691 aa18.62■□□□□ 0.57
CMTM3-202ENST00000424011 NFE2L3Q9Y4A8 694 aa18.62■□□□□ 0.57
CMTM3-202ENST00000424011 IKQ13123 557 aaPredicted RBP18.61■□□□□ 0.57
CMTM3-202ENST00000424011 BTNL9Q6UXG8 535 aa18.61■□□□□ 0.57
CMTM3-202ENST00000424011 ARHGAP27Q6ZUM4 889 aa18.61■□□□□ 0.57
CMTM3-202ENST00000424011 TMEM232C9JQI7 657 aa18.61■□□□□ 0.57
CMTM3-202ENST00000424011 TNNT1P13805 278 aa18.61■□□□□ 0.57
CMTM3-202ENST00000424011 CDC25AP30304 524 aa18.61■□□□□ 0.57
CMTM3-202ENST00000424011 PTPN21Q16825 1174 aa18.61■□□□□ 0.57
CMTM3-202ENST00000424011 SYDE2Q5VT97 1194 aa18.61■□□□□ 0.57
CMTM3-202ENST00000424011 CABP7Q86V35 215 aa18.61■□□□□ 0.57
CMTM3-202ENST00000424011 STAMQ92783 540 aa18.61■□□□□ 0.57
CMTM3-202ENST00000424011 MTMR9Q96QG7 549 aa18.61■□□□□ 0.57
CMTM3-202ENST00000424011 SH2D4AQ9H788 454 aa18.61■□□□□ 0.57
CMTM3-202ENST00000424011 MYOZ2Q9NPC6 264 aa18.61■□□□□ 0.57
CMTM3-202ENST00000424011 ZNF18P17022 549 aa18.6■□□□□ 0.57
CMTM3-202ENST00000424011 ZNF280AP59817 542 aaPredicted RBP18.6■□□□□ 0.57
CMTM3-202ENST00000424011 RRP1BQ14684 758 aaKnown RBP18.6■□□□□ 0.57
CMTM3-202ENST00000424011 INTS13Q9NVM9 706 aa18.6■□□□□ 0.57
CMTM3-202ENST00000424011 TMX2Q9Y320 296 aa18.6■□□□□ 0.57
CMTM3-202ENST00000424011 WNT10BO00744 389 aa18.6■□□□□ 0.57
CMTM3-202ENST00000424011 SFPQP23246 707 aaKnown RBP eCLIP18.6■□□□□ 0.57
CMTM3-202ENST00000424011 FXR2P51116 673 aaKnown RBP eCLIP18.6■□□□□ 0.57
CMTM3-202ENST00000424011 JAG1P78504 1218 aa18.6■□□□□ 0.57
CMTM3-202ENST00000424011 POTEDQ86YR6 584 aa18.6■□□□□ 0.57
CMTM3-202ENST00000424011 TEX2Q8IWB9 1127 aa18.6■□□□□ 0.57
CMTM3-202ENST00000424011 IGSF22Q8N9C0 903 aa18.6■□□□□ 0.57
CMTM3-202ENST00000424011 ZBTB21Q9ULJ3 1066 aa18.6■□□□□ 0.57
CMTM3-202ENST00000424011 SHTN1A0MZ66 631 aa18.59■□□□□ 0.57
CMTM3-202ENST00000424011 CD44P16070 742 aaKnown RBP18.59■□□□□ 0.57
CMTM3-202ENST00000424011 TECP42680 631 aa18.59■□□□□ 0.57
CMTM3-202ENST00000424011 AP3B2Q13367 1082 aa18.59■□□□□ 0.57
CMTM3-202ENST00000424011 PDIA5Q14554 519 aa18.59■□□□□ 0.57
CMTM3-202ENST00000424011 UBE2SQ16763 222 aa18.59■□□□□ 0.57
CMTM3-202ENST00000424011 FBXO11Q86XK2 927 aa18.59■□□□□ 0.57
CMTM3-202ENST00000424011 VSTM4Q8IW00 320 aa18.59■□□□□ 0.57
CMTM3-202ENST00000424011 KIF18AQ8NI77 898 aa18.59■□□□□ 0.57
CMTM3-202ENST00000424011 CALML4Q96GE6 196 aa18.59■□□□□ 0.57
CMTM3-202ENST00000424011 TRMT1Q9NXH9 659 aaKnown RBP18.59■□□□□ 0.57
CMTM3-202ENST00000424011 PP2D1A8MPX8 630 aa18.58■□□□□ 0.57
CMTM3-202ENST00000424011 RPN1P04843 607 aaKnown RBP18.58■□□□□ 0.57
CMTM3-202ENST00000424011 LMNB1P20700 586 aa18.58■□□□□ 0.57
CMTM3-202ENST00000424011 FAM193AP78312 1265 aa18.58■□□□□ 0.57
CMTM3-202ENST00000424011 CUL4BQ13620 913 aa18.58■□□□□ 0.57
CMTM3-202ENST00000424011 TNFAIP1Q13829 316 aa18.58■□□□□ 0.57
CMTM3-202ENST00000424011 MTRQ99707 1265 aa18.58■□□□□ 0.57
CMTM3-202ENST00000424011 TMEM39BQ9GZU3 492 aa18.58■□□□□ 0.57
CMTM3-202ENST00000424011 BLZF1Q9H2G9 400 aa18.58■□□□□ 0.57
CMTM3-202ENST00000424011 SAMSN1Q9NSI8 373 aaKnown RBP18.58■□□□□ 0.57
CMTM3-202ENST00000424011 KBTBD4Q9NVX7 518 aa18.58■□□□□ 0.57
CMTM3-202ENST00000424011 A0A1W2PRG0 241 aa18.58■□□□□ 0.56
CMTM3-202ENST00000424011 CAPN2P17655 700 aa18.58■□□□□ 0.56
CMTM3-202ENST00000424011 TXKP42681 527 aa18.58■□□□□ 0.56
CMTM3-202ENST00000424011 GMPSP49915 693 aaPredicted RBP18.58■□□□□ 0.56
CMTM3-202ENST00000424011 USP11P51784 963 aa18.58■□□□□ 0.56
CMTM3-202ENST00000424011 NBPF9Q3BBW0 867 aa18.58■□□□□ 0.56
CMTM3-202ENST00000424011 NAALADL2Q58DX5 795 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms