RNA–Protein interactions for RNA: ENST00000421058.1

PUDPP1-201, Transcript of pseudouridine 5'-phosphatase pseudogene 1, humanhuman

BASIC

Gene PUDPP1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPP1-201ENST00000421058 SMC3Q9UQE7 1217 aa9.59□□□□□ -0.87
PUDPP1-201ENST00000421058 CNPY2Q9Y2B0 182 aa9.59□□□□□ -0.87
PUDPP1-201ENST00000421058 PTPN22Q9Y2R2 807 aa9.59□□□□□ -0.87
PUDPP1-201ENST00000421058 CNTNAP5Q8WYK1 1306 aa9.58□□□□□ -0.88
PUDPP1-201ENST00000421058 hCG_1642624A0A1W2PR95 340 aa9.58□□□□□ -0.88
PUDPP1-201ENST00000421058 PEX10O60683 326 aa9.58□□□□□ -0.88
PUDPP1-201ENST00000421058 HOXC6P09630 235 aa9.58□□□□□ -0.88
PUDPP1-201ENST00000421058 PDCP20941 246 aa9.58□□□□□ -0.88
PUDPP1-201ENST00000421058 GRK4P32298 578 aa9.58□□□□□ -0.88
PUDPP1-201ENST00000421058 BAATQ14032 418 aaPredicted RBP9.58□□□□□ -0.88
PUDPP1-201ENST00000421058 COL9A3Q14050 684 aaPredicted RBP9.58□□□□□ -0.88
PUDPP1-201ENST00000421058 NTRK3Q16288 839 aa9.58□□□□□ -0.88
PUDPP1-201ENST00000421058 ARHGEF16Q5VV41 709 aa9.58□□□□□ -0.88
PUDPP1-201ENST00000421058 ZNF467Q7Z7K2 595 aaPredicted RBP9.58□□□□□ -0.88
PUDPP1-201ENST00000421058 SNX21Q969T3 373 aa9.58□□□□□ -0.88
PUDPP1-201ENST00000421058 TMX3Q96JJ7 454 aa9.58□□□□□ -0.88
PUDPP1-201ENST00000421058 IWS1Q96ST2 819 aa9.58□□□□□ -0.88
PUDPP1-201ENST00000421058 A1CFQ9NQ94 594 aaKnown RBP9.58□□□□□ -0.88
PUDPP1-201ENST00000421058 FAM217BQ9NTX9 383 aaPredicted RBP9.58□□□□□ -0.88
PUDPP1-201ENST00000421058 CYP39A1Q9NYL5 469 aa9.58□□□□□ -0.88
PUDPP1-201ENST00000421058 GJD2Q9UKL4 321 aa9.58□□□□□ -0.88
PUDPP1-201ENST00000421058 H3BQV1 296 aa9.57□□□□□ -0.88
PUDPP1-201ENST00000421058 K7ELQ4 463 aaPredicted RBP9.57□□□□□ -0.88
PUDPP1-201ENST00000421058 HMGCRP04035 888 aa9.57□□□□□ -0.88
PUDPP1-201ENST00000421058 PGK2P07205 417 aa9.57□□□□□ -0.88
PUDPP1-201ENST00000421058 CAPN2P17655 700 aa9.57□□□□□ -0.88
PUDPP1-201ENST00000421058 ANP32AP39687 249 aaKnown RBP9.57□□□□□ -0.88
PUDPP1-201ENST00000421058 RPS6P62753 249 aaKnown RBP9.57□□□□□ -0.88
PUDPP1-201ENST00000421058 PDE4DQ08499 809 aa9.57□□□□□ -0.88
PUDPP1-201ENST00000421058 MUM1L1Q5H9M0 696 aa9.57□□□□□ -0.88
PUDPP1-201ENST00000421058 IFFO2Q5TF58 517 aa9.57□□□□□ -0.88
PUDPP1-201ENST00000421058 OLFML2BQ68BL8 750 aa9.57□□□□□ -0.88
PUDPP1-201ENST00000421058 FCHSD1Q86WN1 690 aa9.57□□□□□ -0.88
PUDPP1-201ENST00000421058 RMDN3Q96TC7 470 aa9.57□□□□□ -0.88
PUDPP1-201ENST00000421058 TINF2Q9BSI4 451 aa9.57□□□□□ -0.88
PUDPP1-201ENST00000421058 ALG1Q9BT22 464 aa9.57□□□□□ -0.88
PUDPP1-201ENST00000421058 TMEM106CQ9BVX2 250 aa9.57□□□□□ -0.88
PUDPP1-201ENST00000421058 RIC8AQ9NPQ8 531 aa9.57□□□□□ -0.88
PUDPP1-201ENST00000421058 NRBP1Q9UHY1 535 aa9.57□□□□□ -0.88
PUDPP1-201ENST00000421058 ESYT2A0FGR8 921 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 PIK3CDO00329 1044 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 NFIBO00712 420 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 STAM2O75886 525 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 ZNF76P36508 570 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 FUT2Q10981 343 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 AP3B2Q13367 1082 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 STXBP2Q15833 593 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 ZNF792Q3KQV3 632 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 GNPTABQ3T906 1256 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 WWC2Q6AWC2 1192 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 XRRA1Q6P2D8 792 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 POTEEQ6S8J3 1075 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 REXO1Q8N1G1 1221 aaKnown RBP9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 NSUN7Q8NE18 718 aaKnown RBP9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 CLEC4DQ8WXI8 215 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 GPKOWQ92917 476 aaPredicted RBP eCLIP9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 INTS4Q96HW7 963 aaKnown RBP9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 MAML3Q96JK9 1138 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 C8orf76Q96K31 380 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 ZMYND12Q9H0C1 365 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 ABHD16BQ9H3Z7 469 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 HMX1Q9NP08 348 aaPredicted RBP9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 GABRQQ9UN88 632 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 PTCH2Q9Y6C5 1203 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 SYNGAP1Q96PV0 1343 aa9.56□□□□□ -0.88
PUDPP1-201ENST00000421058 MYH6P13533 1939 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 RLFQ13129 1914 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 COL11A1P12107 1806 aaPredicted RBP9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 CCDC194A0A1B0GVG4 234 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 STXBP3O00186 592 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 MSCO60682 206 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 COBLO75128 1261 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 CNGA1P29973 690 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 CCND2P30279 289 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 KRT2P35908 639 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 HSD17B4P51659 736 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 KCNV1Q6PIU1 500 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 MAMDC4Q6UXC1 1216 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 NLRX1Q86UT6 975 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 FAM133AQ8N9E0 248 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 SYTL5Q8TDW5 730 aaPredicted RBP9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 USP6NLQ92738 828 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 CDHR1Q96JP9 859 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 NAP1L4Q99733 375 aaKnown RBP9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 SPC25Q9HBM1 224 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 VPS54Q9P1Q0 977 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 PCDHA4Q9UN74 947 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 CEP350Q5VT06 3117 aa9.55□□□□□ -0.88
PUDPP1-201ENST00000421058 PARP14Q460N5 1801 aa9.54□□□□□ -0.88
PUDPP1-201ENST00000421058 A0A0G2JMZ2 1700 aa9.54□□□□□ -0.88
PUDPP1-201ENST00000421058 CASP8AP2Q9UKL3 1982 aa9.54□□□□□ -0.88
PUDPP1-201ENST00000421058 MGAMO43451 1857 aa9.54□□□□□ -0.88
PUDPP1-201ENST00000421058 DNAJC25-GNG10A0A024R161 153 aa9.54□□□□□ -0.88
PUDPP1-201ENST00000421058 PPP1R11O60927 126 aaPredicted RBP9.54□□□□□ -0.88
PUDPP1-201ENST00000421058 PPFIA3O75145 1194 aa9.54□□□□□ -0.88
PUDPP1-201ENST00000421058 EIF3JO75822 258 aaKnown RBP9.54□□□□□ -0.88
PUDPP1-201ENST00000421058 LARGE1O95461 756 aa9.54□□□□□ -0.88
PUDPP1-201ENST00000421058 MYCLP12524 364 aaPredicted RBP9.54□□□□□ -0.88
PUDPP1-201ENST00000421058 CTGFP29279 349 aa9.54□□□□□ -0.88
PUDPP1-201ENST00000421058 HOXA13P31271 388 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms