RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 STAT2P52630 851 aa16.38■□□□□ 0.21
SSB-204ENST00000417292 SNAP25P60880 206 aa16.38■□□□□ 0.21
SSB-204ENST00000417292 TKFCQ3LXA3 575 aa16.38■□□□□ 0.21
SSB-204ENST00000417292 DUSP28Q4G0W2 176 aa16.38■□□□□ 0.21
SSB-204ENST00000417292 ZSCAN25Q6NSZ9 544 aa16.38■□□□□ 0.21
SSB-204ENST00000417292 GIMAP6Q6P9H5 292 aa16.38■□□□□ 0.21
SSB-204ENST00000417292 ZNF444Q8N0Y2 327 aaPredicted RBP16.38■□□□□ 0.21
SSB-204ENST00000417292 TET1Q8NFU7 2136 aa16.38■□□□□ 0.21
SSB-204ENST00000417292 MORC4Q8TE76 937 aa16.38■□□□□ 0.21
SSB-204ENST00000417292 CHMP4CQ96CF2 233 aa16.38■□□□□ 0.21
SSB-204ENST00000417292 EPB41L4AQ9HCS5 686 aaPredicted RBP16.38■□□□□ 0.21
SSB-204ENST00000417292 VTA1Q9NP79 307 aa16.38■□□□□ 0.21
SSB-204ENST00000417292 PTPRSQ13332 1948 aa16.37■□□□□ 0.21
SSB-204ENST00000417292 STAG1Q8WVM7 1258 aa16.37■□□□□ 0.21
SSB-204ENST00000417292 OSBP2Q969R2 916 aa16.37■□□□□ 0.21
SSB-204ENST00000417292 POLR3EQ9NVU0 708 aa16.37■□□□□ 0.21
SSB-204ENST00000417292 ISY1Q9ULR0 285 aaKnown RBP16.37■□□□□ 0.21
SSB-204ENST00000417292 TANC1Q9C0D5 1861 aa16.37■□□□□ 0.21
SSB-204ENST00000417292 KIF28PB7ZC32 967 aa16.36■□□□□ 0.21
SSB-204ENST00000417292 PITPNM1O00562 1244 aa16.36■□□□□ 0.21
SSB-204ENST00000417292 RAB11FIP3O75154 756 aa16.36■□□□□ 0.21
SSB-204ENST00000417292 MYL3P08590 195 aa16.36■□□□□ 0.21
SSB-204ENST00000417292 NBPF20Q3BBV1 942 aa16.36■□□□□ 0.21
SSB-204ENST00000417292 TMCO2Q7Z6W1 182 aaPredicted RBP16.36■□□□□ 0.21
SSB-204ENST00000417292 FAM160B2Q86V87 743 aa16.36■□□□□ 0.21
SSB-204ENST00000417292 GDPD5Q8WTR4 605 aa16.36■□□□□ 0.21
SSB-204ENST00000417292 CHURC1Q8WUH1 139 aa16.36■□□□□ 0.21
SSB-204ENST00000417292 GMCL1Q96IK5 515 aa16.36■□□□□ 0.21
SSB-204ENST00000417292 WDR11Q9BZH6 1224 aa16.36■□□□□ 0.21
SSB-204ENST00000417292 FTOQ9C0B1 505 aaKnown RBP eCLIP16.36■□□□□ 0.21
SSB-204ENST00000417292 SCN10AQ9Y5Y9 1956 aa16.36■□□□□ 0.21
SSB-204ENST00000417292 PLIN4Q96Q06 1357 aa16.36■□□□□ 0.21
SSB-204ENST00000417292 PRR33A8MZF0 331 aa16.35■□□□□ 0.21
SSB-204ENST00000417292 MCCP23508 829 aa16.35■□□□□ 0.21
SSB-204ENST00000417292 SLC1A4P43007 532 aa16.35■□□□□ 0.21
SSB-204ENST00000417292 IKQ13123 557 aaPredicted RBP16.35■□□□□ 0.21
SSB-204ENST00000417292 FAM47CQ5HY64 1035 aa16.35■□□□□ 0.21
SSB-204ENST00000417292 C20orf194Q5TEA3 1177 aa16.35■□□□□ 0.21
SSB-204ENST00000417292 NSMFQ6X4W1 530 aa16.35■□□□□ 0.21
SSB-204ENST00000417292 RASGRP2Q7LDG7 609 aa16.35■□□□□ 0.21
SSB-204ENST00000417292 NEDD1Q8NHV4 660 aa16.35■□□□□ 0.21
SSB-204ENST00000417292 MTG1Q9BT17 334 aaPredicted RBP16.35■□□□□ 0.21
SSB-204ENST00000417292 C5orf42Q9H799 3197 aa16.34■□□□□ 0.21
SSB-204ENST00000417292 RBAK-RBAKDNI3L0D1 243 aa16.34■□□□□ 0.21
SSB-204ENST00000417292 BAIAP3O94812 1187 aa16.34■□□□□ 0.21
SSB-204ENST00000417292 CPT1AP50416 773 aa16.34■□□□□ 0.21
SSB-204ENST00000417292 GPNMBQ14956 572 aa16.34■□□□□ 0.21
SSB-204ENST00000417292 KCTD1Q719H9 257 aa16.34■□□□□ 0.21
SSB-204ENST00000417292 FAM178BQ8IXR5 827 aa16.34■□□□□ 0.21
SSB-204ENST00000417292 RETREG2Q8NC44 543 aa16.34■□□□□ 0.21
SSB-204ENST00000417292 ZNF287Q9HBT7 754 aa16.34■□□□□ 0.21
SSB-204ENST00000417292 LMCD1Q9NZU5 365 aa16.34■□□□□ 0.21
SSB-204ENST00000417292 PRR12Q9ULL5 1215 aa16.34■□□□□ 0.21
SSB-204ENST00000417292 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.33■□□□□ 0.2
SSB-204ENST00000417292 RBM47A0AV96 593 aaKnown RBP16.33■□□□□ 0.2
SSB-204ENST00000417292 PLA2G6O60733 806 aa16.33■□□□□ 0.2
SSB-204ENST00000417292 TSPY3P0CV98 308 aa16.33■□□□□ 0.2
SSB-204ENST00000417292 TSPY8P0CW00 308 aa16.33■□□□□ 0.2
SSB-204ENST00000417292 TDO2P48775 406 aa16.33■□□□□ 0.2
SSB-204ENST00000417292 WDR5P61964 334 aaKnown RBP16.33■□□□□ 0.2
SSB-204ENST00000417292 NFRKBQ6P4R8 1299 aa16.33■□□□□ 0.2
SSB-204ENST00000417292 GJD3Q8N144 294 aa16.33■□□□□ 0.2
SSB-204ENST00000417292 OR6J1Q8NGC5 347 aa16.33■□□□□ 0.2
SSB-204ENST00000417292 UBE2ZQ9H832 354 aaPredicted RBP16.33■□□□□ 0.2
SSB-204ENST00000417292 SUGCTQ9HAC7 445 aa16.33■□□□□ 0.2
SSB-204ENST00000417292 GPHNQ9NQX3 736 aaPredicted RBP16.33■□□□□ 0.2
SSB-204ENST00000417292 GPAA1O43292 621 aa16.32■□□□□ 0.2
SSB-204ENST00000417292 HMMRO75330 724 aa16.32■□□□□ 0.2
SSB-204ENST00000417292 KCNJ6P48051 423 aa16.32■□□□□ 0.2
SSB-204ENST00000417292 ALDH5A1P51649 535 aaPredicted RBP16.32■□□□□ 0.2
SSB-204ENST00000417292 DEFB103AP81534 67 aa16.32■□□□□ 0.2
SSB-204ENST00000417292 TFAP4Q01664 338 aa16.32■□□□□ 0.2
SSB-204ENST00000417292 BAATQ14032 418 aaPredicted RBP16.32■□□□□ 0.2
SSB-204ENST00000417292 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.32■□□□□ 0.2
SSB-204ENST00000417292 APPBP2Q92624 585 aa16.32■□□□□ 0.2
SSB-204ENST00000417292 CTAGE1Q96RT6 745 aa16.32■□□□□ 0.2
SSB-204ENST00000417292 MTUS1Q9ULD2 1270 aa16.32■□□□□ 0.2
SSB-204ENST00000417292 CCPG1Q9ULG6 757 aa16.32■□□□□ 0.2
SSB-204ENST00000417292 USP34Q70CQ2 3546 aa16.32■□□□□ 0.2
SSB-204ENST00000417292 M0R2C6 588 aa16.31■□□□□ 0.2
SSB-204ENST00000417292 APPP05067 770 aa16.31■□□□□ 0.2
SSB-204ENST00000417292 MRE11P49959 708 aa16.31■□□□□ 0.2
SSB-204ENST00000417292 BFSP2Q13515 415 aa16.31■□□□□ 0.2
SSB-204ENST00000417292 LEXMQ3ZCV2 418 aa16.31■□□□□ 0.2
SSB-204ENST00000417292 RCSD1Q6JBY9 416 aa16.31■□□□□ 0.2
SSB-204ENST00000417292 KBTBD3Q8NAB2 608 aa16.31■□□□□ 0.2
SSB-204ENST00000417292 COPS5Q92905 334 aa16.31■□□□□ 0.2
SSB-204ENST00000417292 TRIP12Q14669 1992 aaPredicted RBP16.3■□□□□ 0.2
SSB-204ENST00000417292 A6NJR5 290 aa16.3■□□□□ 0.2
SSB-204ENST00000417292 NFIBO00712 420 aa16.3■□□□□ 0.2
SSB-204ENST00000417292 ICAM1P05362 532 aa16.3■□□□□ 0.2
SSB-204ENST00000417292 MS4A1P11836 297 aa16.3■□□□□ 0.2
SSB-204ENST00000417292 IL9P15248 144 aa16.3■□□□□ 0.2
SSB-204ENST00000417292 KCNA5P22460 613 aa16.3■□□□□ 0.2
SSB-204ENST00000417292 PTPN11Q06124 597 aaPredicted RBP16.3■□□□□ 0.2
SSB-204ENST00000417292 TCTN1Q2MV58 587 aa16.3■□□□□ 0.2
SSB-204ENST00000417292 IFNL3Q8IZI9 196 aa16.3■□□□□ 0.2
SSB-204ENST00000417292 UIMC1Q96RL1 719 aa16.3■□□□□ 0.2
SSB-204ENST00000417292 ZBED2Q9BTP6 218 aa16.3■□□□□ 0.2
SSB-204ENST00000417292 ZBTB40Q9NUA8 1239 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms