RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 DDX49Q9Y6V7 483 aaKnown RBP11.87□□□□□ -0.51
MDC1-202ENST00000416571 NCOR1O75376 2440 aa11.87□□□□□ -0.51
MDC1-202ENST00000416571 ERC2O15083 957 aa11.86□□□□□ -0.51
MDC1-202ENST00000416571 ICAM1P05362 532 aa11.86□□□□□ -0.51
MDC1-202ENST00000416571 MYL3P08590 195 aa11.86□□□□□ -0.51
MDC1-202ENST00000416571 MYOGP15173 224 aa11.86□□□□□ -0.51
MDC1-202ENST00000416571 KCNA4P22459 653 aa11.86□□□□□ -0.51
MDC1-202ENST00000416571 DUSP28Q4G0W2 176 aa11.86□□□□□ -0.51
MDC1-202ENST00000416571 BRDTQ58F21 947 aaPredicted RBP11.86□□□□□ -0.51
MDC1-202ENST00000416571 FAM47CQ5HY64 1035 aa11.86□□□□□ -0.51
MDC1-202ENST00000416571 TMEM67Q5HYA8 995 aa11.86□□□□□ -0.51
MDC1-202ENST00000416571 DEFB128Q7Z7B8 93 aa11.86□□□□□ -0.51
MDC1-202ENST00000416571 SEC62Q99442 399 aaKnown RBP11.86□□□□□ -0.51
MDC1-202ENST00000416571 MPHOSPH6Q99547 160 aaKnown RBP11.86□□□□□ -0.51
MDC1-202ENST00000416571 DCTPP1Q9H773 170 aa11.86□□□□□ -0.51
MDC1-202ENST00000416571 TRMT13Q9NUP7 481 aaKnown RBP11.86□□□□□ -0.51
MDC1-202ENST00000416571 LCTP09848 1927 aa11.86□□□□□ -0.51
MDC1-202ENST00000416571 TNKSO95271 1327 aa11.86□□□□□ -0.51
MDC1-202ENST00000416571 TTC41PQ6P2S7 1318 aa11.86□□□□□ -0.51
MDC1-202ENST00000416571 RAD50Q92878 1312 aa11.86□□□□□ -0.51
MDC1-202ENST00000416571 TCF20Q9UGU0 1960 aaKnown RBP11.85□□□□□ -0.51
MDC1-202ENST00000416571 BDP1A6H8Y1 2624 aa11.85□□□□□ -0.51
MDC1-202ENST00000416571 PTPDC1A2A3K4 754 aa11.85□□□□□ -0.51
MDC1-202ENST00000416571 CYP2C9P11712 490 aa11.85□□□□□ -0.51
MDC1-202ENST00000416571 ALDH5A1P51649 535 aaPredicted RBP11.85□□□□□ -0.51
MDC1-202ENST00000416571 ALYREFQ86V81 257 aaKnown RBP11.85□□□□□ -0.51
MDC1-202ENST00000416571 C1QTNF1Q9BXJ1 281 aa11.85□□□□□ -0.51
MDC1-202ENST00000416571 WDR11Q9BZH6 1224 aa11.85□□□□□ -0.51
MDC1-202ENST00000416571 SCN5AQ14524 2016 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 CHD9Q3L8U1 2897 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 LOC102724159A0A0B4J2E5 919 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 KIF28PB7ZC32 967 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 RANBP6O60518 1105 aaKnown RBP11.84□□□□□ -0.51
MDC1-202ENST00000416571 NMT2O60551 498 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 CA3P07451 260 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 RFC2P35250 354 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 PURAQ00577 322 aaKnown RBP11.84□□□□□ -0.51
MDC1-202ENST00000416571 CTDSPL2Q05D32 466 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 BAATQ14032 418 aaPredicted RBP11.84□□□□□ -0.51
MDC1-202ENST00000416571 TTLL4Q14679 1199 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 PPP2R5BQ15173 497 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 PWP2Q15269 919 aaKnown RBP11.84□□□□□ -0.51
MDC1-202ENST00000416571 ZMYM1Q5SVZ6 1142 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 TMEM63BQ5T3F8 832 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 C20orf194Q5TEA3 1177 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 RETREG2Q8NC44 543 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 OR6J1Q8NGC5 347 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 MORC4Q8TE76 937 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 DCAF4Q8WV16 495 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 PURBQ96QR8 312 aaKnown RBP11.84□□□□□ -0.51
MDC1-202ENST00000416571 SLC9A7Q96T83 725 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 MTG1Q9BT17 334 aaPredicted RBP11.84□□□□□ -0.51
MDC1-202ENST00000416571 FTOQ9C0B1 505 aaKnown RBP eCLIP11.84□□□□□ -0.51
MDC1-202ENST00000416571 CERS4Q9HA82 394 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 TOMM22Q9NS69 142 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 NOD1Q9Y239 953 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 TANC1Q9C0D5 1861 aa11.84□□□□□ -0.51
MDC1-202ENST00000416571 NKRFO15226 690 aaKnown RBP eCLIP11.83□□□□□ -0.52
MDC1-202ENST00000416571 CALML3P27482 149 aa11.83□□□□□ -0.52
MDC1-202ENST00000416571 TFF2Q03403 129 aa11.83□□□□□ -0.52
MDC1-202ENST00000416571 PDE4DQ08499 809 aa11.83□□□□□ -0.52
MDC1-202ENST00000416571 RASGRP2Q7LDG7 609 aa11.83□□□□□ -0.52
MDC1-202ENST00000416571 NECAB3Q96P71 396 aaPredicted RBP11.83□□□□□ -0.52
MDC1-202ENST00000416571 RANBP17Q9H2T7 1088 aaKnown RBP11.83□□□□□ -0.52
MDC1-202ENST00000416571 IL17RBQ9NRM6 502 aa11.83□□□□□ -0.52
MDC1-202ENST00000416571 PNMA2Q9UL42 364 aa11.83□□□□□ -0.52
MDC1-202ENST00000416571 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.83□□□□□ -0.52
MDC1-202ENST00000416571 MUC6Q6W4X9 2439 aa11.83□□□□□ -0.52
MDC1-202ENST00000416571 B4DLN1 442 aa11.82□□□□□ -0.52
MDC1-202ENST00000416571 RFXAPO00287 272 aa11.82□□□□□ -0.52
MDC1-202ENST00000416571 NFIBO00712 420 aa11.82□□□□□ -0.52
MDC1-202ENST00000416571 KPNA6O60684 536 aa11.82□□□□□ -0.52
MDC1-202ENST00000416571 BMP1P13497 986 aa11.82□□□□□ -0.52
MDC1-202ENST00000416571 SLC16A2P36021 539 aa11.82□□□□□ -0.52
MDC1-202ENST00000416571 KCNJ6P48051 423 aa11.82□□□□□ -0.52
MDC1-202ENST00000416571 KCNQ1P51787 676 aa11.82□□□□□ -0.52
MDC1-202ENST00000416571 MRPL12P52815 198 aaKnown RBP11.82□□□□□ -0.52
MDC1-202ENST00000416571 CHMP4BP1P59074 171 aa11.82□□□□□ -0.52
MDC1-202ENST00000416571 BFSP2Q13515 415 aa11.82□□□□□ -0.52
MDC1-202ENST00000416571 NBPF20Q3BBV1 942 aa11.82□□□□□ -0.52
MDC1-202ENST00000416571 SYDE2Q5VT97 1194 aa11.82□□□□□ -0.52
MDC1-202ENST00000416571 RNF207Q6ZRF8 634 aa11.82□□□□□ -0.52
MDC1-202ENST00000416571 PHOSPHO2Q8TCD6 241 aa11.82□□□□□ -0.52
MDC1-202ENST00000416571 SCFD2Q8WU76 684 aa11.82□□□□□ -0.52
MDC1-202ENST00000416571 GPCPD1Q9NPB8 672 aa11.82□□□□□ -0.52
MDC1-202ENST00000416571 ZBTB47Q9UFB7 747 aaPredicted RBP11.82□□□□□ -0.52
MDC1-202ENST00000416571 COG5Q9UP83 839 aa11.82□□□□□ -0.52
MDC1-202ENST00000416571 HCN4Q9Y3Q4 1203 aa11.82□□□□□ -0.52
MDC1-202ENST00000416571 MTCH2Q9Y6C9 303 aa11.82□□□□□ -0.52
MDC1-202ENST00000416571 FRMPD2Q68DX3 1309 aaPredicted RBP11.82□□□□□ -0.52
MDC1-202ENST00000416571 PITPNM1O00562 1244 aa11.81□□□□□ -0.52
MDC1-202ENST00000416571 TOP1P11387 765 aaKnown RBP11.81□□□□□ -0.52
MDC1-202ENST00000416571 PTPN11Q06124 597 aaPredicted RBP11.81□□□□□ -0.52
MDC1-202ENST00000416571 RRP12Q5JTH9 1297 aaKnown RBP11.81□□□□□ -0.52
MDC1-202ENST00000416571 TTBK2Q6IQ55 1244 aa11.81□□□□□ -0.52
MDC1-202ENST00000416571 NFRKBQ6P4R8 1299 aa11.81□□□□□ -0.52
MDC1-202ENST00000416571 SLC30A10Q6XR72 485 aa11.81□□□□□ -0.52
MDC1-202ENST00000416571 CCDC155Q8N6L0 562 aa11.81□□□□□ -0.52
MDC1-202ENST00000416571 PI4K2BQ8TCG2 481 aa11.81□□□□□ -0.52
MDC1-202ENST00000416571 ARNTL2Q8WYA1 636 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms