RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 KIAA1211Q6ZU35 1233 aa12.75□□□□□ -0.37
A1CF-208ENST00000414883 RALYLQ86SE5 291 aaKnown RBP12.75□□□□□ -0.37
A1CF-208ENST00000414883 RASEFQ8IZ41 740 aa12.75□□□□□ -0.37
A1CF-208ENST00000414883 GDF15Q99988 308 aa12.75□□□□□ -0.37
A1CF-208ENST00000414883 MTA3Q9BTC8 594 aa12.75□□□□□ -0.37
A1CF-208ENST00000414883 RIOX1Q9H6W3 641 aa12.75□□□□□ -0.37
A1CF-208ENST00000414883 PDGFCQ9NRA1 345 aa12.75□□□□□ -0.37
A1CF-208ENST00000414883 COL20A1Q9P218 1284 aa12.75□□□□□ -0.37
A1CF-208ENST00000414883 RBM27Q9P2N5 1060 aaKnown RBP12.75□□□□□ -0.37
A1CF-208ENST00000414883 PNMA2Q9UL42 364 aa12.75□□□□□ -0.37
A1CF-208ENST00000414883 ZMYND8Q9ULU4 1186 aaPredicted RBP12.75□□□□□ -0.37
A1CF-208ENST00000414883 GNEQ9Y223 722 aaKnown RBP12.75□□□□□ -0.37
A1CF-208ENST00000414883 KBTBD13C9JR72 458 aa12.74□□□□□ -0.37
A1CF-208ENST00000414883 SH2B2O14492 632 aaPredicted RBP12.74□□□□□ -0.37
A1CF-208ENST00000414883 PRC1O43663 620 aa12.74□□□□□ -0.37
A1CF-208ENST00000414883 SYN1P17600 705 aa12.74□□□□□ -0.37
A1CF-208ENST00000414883 GJA9P57773 515 aa12.74□□□□□ -0.37
A1CF-208ENST00000414883 GHRHRQ02643 423 aa12.74□□□□□ -0.37
A1CF-208ENST00000414883 TSGA10IPQ3SY00 556 aa12.74□□□□□ -0.37
A1CF-208ENST00000414883 C1orf53Q5VUE5 145 aa12.74□□□□□ -0.37
A1CF-208ENST00000414883 RNF207Q6ZRF8 634 aa12.74□□□□□ -0.37
A1CF-208ENST00000414883 FBXO16Q8IX29 292 aaPredicted RBP12.74□□□□□ -0.37
A1CF-208ENST00000414883 KCNB2Q92953 911 aa12.74□□□□□ -0.37
A1CF-208ENST00000414883 VAT1LQ9HCJ6 419 aa12.74□□□□□ -0.37
A1CF-208ENST00000414883 CHD9Q3L8U1 2897 aa12.73□□□□□ -0.37
A1CF-208ENST00000414883 ABCB11O95342 1321 aa12.73□□□□□ -0.37
A1CF-208ENST00000414883 LOC102724159A0A0B4J2E5 919 aa12.73□□□□□ -0.37
A1CF-208ENST00000414883 A0A1W2PQ45 241 aaPredicted RBP12.73□□□□□ -0.37
A1CF-208ENST00000414883 A0A1W2PQY0 241 aa12.73□□□□□ -0.37
A1CF-208ENST00000414883 RBM47A0AV96 593 aaKnown RBP12.73□□□□□ -0.37
A1CF-208ENST00000414883 PTPDC1A2A3K4 754 aa12.73□□□□□ -0.37
A1CF-208ENST00000414883 SMPD1P17405 629 aa12.73□□□□□ -0.37
A1CF-208ENST00000414883 CALML3P27482 149 aa12.73□□□□□ -0.37
A1CF-208ENST00000414883 RTP1P59025 263 aa12.73□□□□□ -0.37
A1CF-208ENST00000414883 EXOSC10Q01780 885 aaKnown RBP12.73□□□□□ -0.37
A1CF-208ENST00000414883 PWP2Q15269 919 aaKnown RBP12.73□□□□□ -0.37
A1CF-208ENST00000414883 ADCK5Q3MIX3 580 aa12.73□□□□□ -0.37
A1CF-208ENST00000414883 RNF180Q86T96 592 aa12.73□□□□□ -0.37
A1CF-208ENST00000414883 FBXO11Q86XK2 927 aa12.73□□□□□ -0.37
A1CF-208ENST00000414883 ZNF654Q8IZM8 581 aa12.73□□□□□ -0.37
A1CF-208ENST00000414883 SYTL5Q8TDW5 730 aaPredicted RBP12.73□□□□□ -0.37
A1CF-208ENST00000414883 FERMT2Q96AC1 680 aa12.73□□□□□ -0.37
A1CF-208ENST00000414883 MAP3K14Q99558 947 aa12.73□□□□□ -0.37
A1CF-208ENST00000414883 TSEN34Q9BSV6 310 aaKnown RBP12.73□□□□□ -0.37
A1CF-208ENST00000414883 MYL10Q9BUA6 226 aa12.73□□□□□ -0.37
A1CF-208ENST00000414883 MAF1Q9H063 256 aa12.73□□□□□ -0.37
A1CF-208ENST00000414883 A0A0C4DFX4 3053 aa12.73□□□□□ -0.37
A1CF-208ENST00000414883 ZBTB5O15062 677 aa12.72□□□□□ -0.37
A1CF-208ENST00000414883 MCM5P33992 734 aa12.72□□□□□ -0.37
A1CF-208ENST00000414883 LIFRP42702 1097 aa12.72□□□□□ -0.37
A1CF-208ENST00000414883 FXR1P51114 621 aaKnown RBP eCLIP12.72□□□□□ -0.37
A1CF-208ENST00000414883 ACLYP53396 1101 aa12.72□□□□□ -0.37
A1CF-208ENST00000414883 TNFAIP2Q03169 654 aa12.72□□□□□ -0.37
A1CF-208ENST00000414883 SART3Q15020 963 aaKnown RBP12.72□□□□□ -0.37
A1CF-208ENST00000414883 KCNA10Q16322 511 aa12.72□□□□□ -0.37
A1CF-208ENST00000414883 TRIM60Q495X7 471 aa12.72□□□□□ -0.37
A1CF-208ENST00000414883 EEPD1Q7L9B9 569 aa12.72□□□□□ -0.37
A1CF-208ENST00000414883 DNERQ8NFT8 737 aa12.72□□□□□ -0.37
A1CF-208ENST00000414883 LRRC2Q9BYS8 371 aa12.72□□□□□ -0.37
A1CF-208ENST00000414883 VTA1Q9NP79 307 aa12.72□□□□□ -0.37
A1CF-208ENST00000414883 ADD3Q9UEY8 706 aaKnown RBP12.72□□□□□ -0.37
A1CF-208ENST00000414883 SCN10AQ9Y5Y9 1956 aa12.71□□□□□ -0.37
A1CF-208ENST00000414883 ERICH2A1L162 156 aa12.71□□□□□ -0.37
A1CF-208ENST00000414883 DDAH1O94760 285 aa12.71□□□□□ -0.37
A1CF-208ENST00000414883 BMP8BP34820 402 aa12.71□□□□□ -0.37
A1CF-208ENST00000414883 MAGEA10P43363 369 aaPredicted RBP12.71□□□□□ -0.37
A1CF-208ENST00000414883 HSD17B4P51659 736 aa12.71□□□□□ -0.37
A1CF-208ENST00000414883 IQSEC1Q6DN90 963 aa12.71□□□□□ -0.37
A1CF-208ENST00000414883 CATIPQ7Z7H3 387 aa12.71□□□□□ -0.37
A1CF-208ENST00000414883 SGMS1Q86VZ5 419 aa12.71□□□□□ -0.37
A1CF-208ENST00000414883 TMEM87BQ96K49 555 aa12.71□□□□□ -0.37
A1CF-208ENST00000414883 TAAR1Q96RJ0 339 aa12.71□□□□□ -0.37
A1CF-208ENST00000414883 PIGSQ96S52 555 aa12.71□□□□□ -0.37
A1CF-208ENST00000414883 AMNQ9BXJ7 453 aa12.71□□□□□ -0.37
A1CF-208ENST00000414883 CHD7Q9P2D1 2997 aa12.71□□□□□ -0.38
A1CF-208ENST00000414883 PRUNE2Q8WUY3 3088 aa12.7□□□□□ -0.38
A1CF-208ENST00000414883 MOXD2PA6NHM9 499 aa12.7□□□□□ -0.38
A1CF-208ENST00000414883 PLEKHA8P1O95397 391 aa12.7□□□□□ -0.38
A1CF-208ENST00000414883 ASGR1P07306 291 aa12.7□□□□□ -0.38
A1CF-208ENST00000414883 C6orf222P0C671 652 aaPredicted RBP12.7□□□□□ -0.38
A1CF-208ENST00000414883 CDK7P50613 346 aa12.7□□□□□ -0.38
A1CF-208ENST00000414883 BEX3Q00994 111 aa12.7□□□□□ -0.38
A1CF-208ENST00000414883 ERICH6BQ5W0A0 696 aa12.7□□□□□ -0.38
A1CF-208ENST00000414883 CASC1Q6TDU7 716 aa12.7□□□□□ -0.38
A1CF-208ENST00000414883 SH3RF1Q7Z6J0 888 aa12.7□□□□□ -0.38
A1CF-208ENST00000414883 TLK2Q86UE8 772 aa12.7□□□□□ -0.38
A1CF-208ENST00000414883 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
A1CF-208ENST00000414883 SRBD1Q8N5C6 995 aaKnown RBP12.7□□□□□ -0.38
A1CF-208ENST00000414883 SPZ1Q9BXG8 430 aa12.7□□□□□ -0.38
A1CF-208ENST00000414883 PDLIM7Q9NR12 457 aa12.7□□□□□ -0.38
A1CF-208ENST00000414883 PPP4R2Q9NY27 417 aa12.7□□□□□ -0.38
A1CF-208ENST00000414883 ATP11BQ9Y2G3 1177 aa12.7□□□□□ -0.38
A1CF-208ENST00000414883 MRPL11Q9Y3B7 192 aaKnown RBP12.7□□□□□ -0.38
A1CF-208ENST00000414883 Q9Y3F1 56 aa12.7□□□□□ -0.38
A1CF-208ENST00000414883 MYH7BA7E2Y1 1941 aa12.7□□□□□ -0.38
A1CF-208ENST00000414883 GRIN2DO15399 1336 aa12.69□□□□□ -0.38
A1CF-208ENST00000414883 PNMA6FA0A0J9YX94 578 aa12.69□□□□□ -0.38
A1CF-208ENST00000414883 TRIM43BA6NCK2 446 aa12.69□□□□□ -0.38
A1CF-208ENST00000414883 DHX16O60231 1041 aaKnown RBP12.69□□□□□ -0.38
A1CF-208ENST00000414883 ARIH2O95376 493 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms