RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 COL13A1Q5TAT6 717 aaPredicted RBP21.36■■□□□ 1.01
CDC42-204ENST00000411827 MCTP1Q6DN14 999 aa21.36■■□□□ 1.01
CDC42-204ENST00000411827 RNF207Q6ZRF8 634 aa21.36■■□□□ 1.01
CDC42-204ENST00000411827 RNF186Q9NXI6 227 aa21.36■■□□□ 1.01
CDC42-204ENST00000411827 SPDYE3A6NKU9 549 aa21.35■■□□□ 1.01
CDC42-204ENST00000411827 B4DLN1 442 aa21.35■■□□□ 1.01
CDC42-204ENST00000411827 MEIS2O14770 477 aa21.35■■□□□ 1.01
CDC42-204ENST00000411827 CFBP00751 764 aa21.35■■□□□ 1.01
CDC42-204ENST00000411827 GUCY1B3Q02153 619 aa21.35■■□□□ 1.01
CDC42-204ENST00000411827 ARHGEF6Q15052 776 aa21.35■■□□□ 1.01
CDC42-204ENST00000411827 NPY5RQ15761 445 aa21.35■■□□□ 1.01
CDC42-204ENST00000411827 Q3C1V9 767 aa21.35■■□□□ 1.01
CDC42-204ENST00000411827 NOSTRINQ8IVI9 506 aa21.35■■□□□ 1.01
CDC42-204ENST00000411827 NAP1L4Q99733 375 aaKnown RBP21.35■■□□□ 1.01
CDC42-204ENST00000411827 HOMER2Q9NSB8 354 aa21.35■■□□□ 1.01
CDC42-204ENST00000411827 CPA4Q9UI42 421 aa21.35■■□□□ 1.01
CDC42-204ENST00000411827 COL11A1P12107 1806 aaPredicted RBP21.34■■□□□ 1.01
CDC42-204ENST00000411827 CCDC194A0A1B0GVG4 234 aa21.34■■□□□ 1.01
CDC42-204ENST00000411827 M0R2N6 131 aa21.34■■□□□ 1.01
CDC42-204ENST00000411827 NFIBO00712 420 aa21.34■■□□□ 1.01
CDC42-204ENST00000411827 OPLAHO14841 1288 aa21.34■■□□□ 1.01
CDC42-204ENST00000411827 TRAPPC10P48553 1259 aa21.34■■□□□ 1.01
CDC42-204ENST00000411827 CLK2P49760 499 aaKnown RBP21.34■■□□□ 1.01
CDC42-204ENST00000411827 KIF22Q14807 665 aa21.34■■□□□ 1.01
CDC42-204ENST00000411827 MUM1L1Q5H9M0 696 aa21.34■■□□□ 1.01
CDC42-204ENST00000411827 ATL3Q6DD88 541 aa21.34■■□□□ 1.01
CDC42-204ENST00000411827 ANKRD35Q8N283 1001 aa21.34■■□□□ 1.01
CDC42-204ENST00000411827 MPHOSPH6Q99547 160 aaKnown RBP21.34■■□□□ 1.01
CDC42-204ENST00000411827 GJB4Q9NTQ9 266 aa21.34■■□□□ 1.01
CDC42-204ENST00000411827 SLC5A4Q9NY91 659 aa21.34■■□□□ 1.01
CDC42-204ENST00000411827 BTBD18B2RXH4 712 aa21.33■■□□□ 1.01
CDC42-204ENST00000411827 DTNBO60941 627 aa21.33■■□□□ 1.01
CDC42-204ENST00000411827 NONOQ15233 471 aaKnown RBP eCLIP21.33■■□□□ 1.011e-7■■■■□ 23.3
CDC42-204ENST00000411827 XRRA1Q6P2D8 792 aa21.33■■□□□ 1.01
CDC42-204ENST00000411827 NSMFQ6X4W1 530 aa21.33■■□□□ 1.01
CDC42-204ENST00000411827 DNERQ8NFT8 737 aa21.33■■□□□ 1.01
CDC42-204ENST00000411827 SHISA4Q96DD7 197 aa21.33■■□□□ 1.01
CDC42-204ENST00000411827 MMP19Q99542 508 aa21.33■■□□□ 1.01
CDC42-204ENST00000411827 CYP39A1Q9NYL5 469 aa21.33■■□□□ 1.01
CDC42-204ENST00000411827 ADD3Q9UEY8 706 aaKnown RBP21.33■■□□□ 1.01
CDC42-204ENST00000411827 NOL7Q9UMY1 257 aaKnown RBP21.33■■□□□ 1.01
CDC42-204ENST00000411827 PCDHA6Q9UN73 950 aa21.33■■□□□ 1.01
CDC42-204ENST00000411827 PCDHA8Q9Y5H6 950 aa21.33■■□□□ 1.01
CDC42-204ENST00000411827 SLC15A5A6NIM6 579 aa21.32■■□□□ 1
CDC42-204ENST00000411827 TRPA1O75762 1119 aa21.32■■□□□ 1
CDC42-204ENST00000411827 F13A1P00488 732 aa21.32■■□□□ 1
CDC42-204ENST00000411827 HSPA1AP0DMV8 641 aaKnown RBP21.32■■□□□ 1
CDC42-204ENST00000411827 HSPA1BP0DMV9 641 aaKnown RBP21.32■■□□□ 1
CDC42-204ENST00000411827 FOSBP53539 338 aa21.32■■□□□ 1
CDC42-204ENST00000411827 RPS6P62753 249 aaKnown RBP21.32■■□□□ 1
CDC42-204ENST00000411827 RILPL1Q5EBL4 403 aa21.32■■□□□ 1
CDC42-204ENST00000411827 PLEKHH3Q7Z736 793 aa21.32■■□□□ 1
CDC42-204ENST00000411827 TNFRSF25Q93038 417 aa21.32■■□□□ 1
CDC42-204ENST00000411827 A1CFQ9NQ94 594 aaKnown RBP21.32■■□□□ 1
CDC42-204ENST00000411827 GNRH1P01148 92 aa21.31■■□□□ 1
CDC42-204ENST00000411827 USP11P51784 963 aa21.31■■□□□ 1
CDC42-204ENST00000411827 SP3Q02447 781 aa21.31■■□□□ 1
CDC42-204ENST00000411827 ORC2Q13416 577 aaPredicted RBP21.31■■□□□ 1
CDC42-204ENST00000411827 SYTL5Q8TDW5 730 aaPredicted RBP21.31■■□□□ 1
CDC42-204ENST00000411827 SOCS4Q8WXH5 440 aa21.31■■□□□ 1
CDC42-204ENST00000411827 PORCNQ9H237 461 aa21.31■■□□□ 1
CDC42-204ENST00000411827 BIN2Q9UBW5 565 aaPredicted RBP21.31■■□□□ 1
CDC42-204ENST00000411827 DIS3Q9Y2L1 958 aaKnown RBP21.31■■□□□ 1
CDC42-204ENST00000411827 POTEB2H3BUK9 544 aa21.3■■□□□ 1
CDC42-204ENST00000411827 PTPREP23469 700 aa21.3■■□□□ 1
CDC42-204ENST00000411827 FCGRTP55899 365 aa21.3■■□□□ 1
CDC42-204ENST00000411827 BAATQ14032 418 aaPredicted RBP21.3■■□□□ 1
CDC42-204ENST00000411827 WDR78Q5VTH9 848 aa21.3■■□□□ 1
CDC42-204ENST00000411827 USP17L6PQ6QN14 398 aa21.3■■□□□ 1
CDC42-204ENST00000411827 GPR142Q7Z601 462 aa21.3■■□□□ 1
CDC42-204ENST00000411827 NSUN6Q8TEA1 469 aaKnown RBP21.3■■□□□ 1
CDC42-204ENST00000411827 IWS1Q96ST2 819 aa21.3■■□□□ 1
CDC42-204ENST00000411827 DNAJC25-GNG10A0A024R161 153 aa21.29■■□□□ 1
CDC42-204ENST00000411827 RESTQ13127 1097 aa21.29■■□□□ 1
CDC42-204ENST00000411827 NR5A1Q13285 461 aa21.29■■□□□ 1
CDC42-204ENST00000411827 OXER1Q8TDS5 423 aa21.29■■□□□ 1
CDC42-204ENST00000411827 ZNF396Q96N95 335 aaPredicted RBP21.29■■□□□ 1
CDC42-204ENST00000411827 EFCC1Q9HA90 598 aa21.29■■□□□ 1
CDC42-204ENST00000411827 STAM2O75886 525 aa21.28■■□□□ 1
CDC42-204ENST00000411827 BMP15O95972 392 aa21.28■■□□□ 1
CDC42-204ENST00000411827 GCFC2P16383 781 aaKnown RBP21.28■■□□□ 1
CDC42-204ENST00000411827 HOXA13P31271 388 aaPredicted RBP21.28■■□□□ 1
CDC42-204ENST00000411827 SREBF1P36956 1147 aa21.28■■□□□ 1
CDC42-204ENST00000411827 LACTBP83111 547 aaPredicted RBP21.28■■□□□ 1
CDC42-204ENST00000411827 GRB14Q14449 540 aa21.28■■□□□ 1
CDC42-204ENST00000411827 UBE2SQ16763 222 aa21.28■■□□□ 1
CDC42-204ENST00000411827 JAKMIP3Q5VZ66 844 aa21.28■■□□□ 1
CDC42-204ENST00000411827 MOXD1Q6UVY6 613 aa21.28■■□□□ 1
CDC42-204ENST00000411827 ZNF467Q7Z7K2 595 aaPredicted RBP21.28■■□□□ 1
CDC42-204ENST00000411827 FAM133AQ8N9E0 248 aa21.28■■□□□ 1
CDC42-204ENST00000411827 RMDN3Q96TC7 470 aa21.28■■□□□ 1
CDC42-204ENST00000411827 ANO3Q9BYT9 981 aa21.28■■□□□ 1
CDC42-204ENST00000411827 ZDHHC9Q9Y397 364 aa21.28■■□□□ 1
CDC42-204ENST00000411827 FRMPD4Q14CM0 1322 aa21.28■■□□□ 1
CDC42-204ENST00000411827 GPR25O00155 361 aa21.27■■□□□ 1
CDC42-204ENST00000411827 TNPO2O14787 897 aaKnown RBP21.27■■□□□ 1
CDC42-204ENST00000411827 TBC1D8O95759 1140 aa21.27■■□□□ 1
CDC42-204ENST00000411827 CYP3A4P08684 503 aa21.27■■□□□ 1
CDC42-204ENST00000411827 HOXD10P28358 340 aa21.27■■□□□ 1
CDC42-204ENST00000411827 PKP1Q13835 747 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms