RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 ZMYND12Q9H0C1 365 aa23.7■■□□□ 1.38
C4orf48-202ENST00000409860 RIC8AQ9NPQ8 531 aa23.7■■□□□ 1.38
C4orf48-202ENST00000409860 MAP3K20Q9NYL2 800 aaKnown RBP23.7■■□□□ 1.38
C4orf48-202ENST00000409860 CYP39A1Q9NYL5 469 aa23.7■■□□□ 1.38
C4orf48-202ENST00000409860 MYH6P13533 1939 aa23.7■■□□□ 1.38
C4orf48-202ENST00000409860 CALML3P27482 149 aa23.69■■□□□ 1.38
C4orf48-202ENST00000409860 LBX1P52954 281 aa23.69■■□□□ 1.38
C4orf48-202ENST00000409860 FOSBP53539 338 aa23.69■■□□□ 1.38
C4orf48-202ENST00000409860 RPS6P62753 249 aaKnown RBP23.69■■□□□ 1.38
C4orf48-202ENST00000409860 GHRHRQ02643 423 aa23.69■■□□□ 1.38
C4orf48-202ENST00000409860 MORN1Q5T089 497 aa23.69■■□□□ 1.38
C4orf48-202ENST00000409860 SLC30A10Q6XR72 485 aa23.69■■□□□ 1.38
C4orf48-202ENST00000409860 BICD2Q8TD16 824 aa23.69■■□□□ 1.38
C4orf48-202ENST00000409860 SLC5A4Q9NY91 659 aa23.69■■□□□ 1.38
C4orf48-202ENST00000409860 POTEB2H3BUK9 544 aa23.68■■□□□ 1.38
C4orf48-202ENST00000409860 RGS2P41220 211 aa23.68■■□□□ 1.38
C4orf48-202ENST00000409860 HSD17B4P51659 736 aa23.68■■□□□ 1.38
C4orf48-202ENST00000409860 MAP2K5Q13163 448 aa23.68■■□□□ 1.38
C4orf48-202ENST00000409860 GALNT17Q6IS24 598 aa23.68■■□□□ 1.38
C4orf48-202ENST00000409860 DPP9Q86TI2 863 aa23.68■■□□□ 1.38
C4orf48-202ENST00000409860 TBC1D5Q92609 795 aa23.68■■□□□ 1.38
C4orf48-202ENST00000409860 RBM19Q9Y4C8 960 aaKnown RBP23.68■■□□□ 1.38
C4orf48-202ENST00000409860 PIK3CDO00329 1044 aa23.67■■□□□ 1.38
C4orf48-202ENST00000409860 PGK2P07205 417 aa23.67■■□□□ 1.38
C4orf48-202ENST00000409860 HOXA13P31271 388 aaPredicted RBP23.67■■□□□ 1.38
C4orf48-202ENST00000409860 CAP1Q01518 475 aa23.67■■□□□ 1.38
C4orf48-202ENST00000409860 SYTL5Q8TDW5 730 aaPredicted RBP23.67■■□□□ 1.38
C4orf48-202ENST00000409860 SHISA4Q96DD7 197 aa23.67■■□□□ 1.38
C4orf48-202ENST00000409860 PHF20Q9BVI0 1012 aa23.67■■□□□ 1.38
C4orf48-202ENST00000409860 SRRDQ9UH36 339 aa23.67■■□□□ 1.38
C4orf48-202ENST00000409860 GJD2Q9UKL4 321 aa23.67■■□□□ 1.38
C4orf48-202ENST00000409860 KCNJ14Q9UNX9 436 aa23.67■■□□□ 1.38
C4orf48-202ENST00000409860 PRMT2P55345 433 aa23.66■■□□□ 1.38
C4orf48-202ENST00000409860 PRKCZQ05513 592 aa23.66■■□□□ 1.38
C4orf48-202ENST00000409860 KRT40Q6A162 431 aa23.66■■□□□ 1.38
C4orf48-202ENST00000409860 USP17L6PQ6QN14 398 aa23.66■■□□□ 1.38
C4orf48-202ENST00000409860 APBA2Q99767 749 aa23.66■■□□□ 1.38
C4orf48-202ENST00000409860 BRMS1Q9HCU9 246 aa23.66■■□□□ 1.38
C4orf48-202ENST00000409860 PCDHA4Q9UN74 947 aa23.66■■□□□ 1.38
C4orf48-202ENST00000409860 TRIM17Q9Y577 477 aa23.66■■□□□ 1.38
C4orf48-202ENST00000409860 DNAJC25-GNG10A0A024R161 153 aa23.65■■□□□ 1.38
C4orf48-202ENST00000409860 MEIS2O14770 477 aa23.65■■□□□ 1.38
C4orf48-202ENST00000409860 PDCP20941 246 aa23.65■■□□□ 1.38
C4orf48-202ENST00000409860 UBE2SQ16763 222 aa23.65■■□□□ 1.38
C4orf48-202ENST00000409860 REXO1Q8N1G1 1221 aaKnown RBP23.65■■□□□ 1.38
C4orf48-202ENST00000409860 FAM133AQ8N9E0 248 aa23.65■■□□□ 1.38
C4orf48-202ENST00000409860 DAGLBQ8NCG7 672 aa23.65■■□□□ 1.38
C4orf48-202ENST00000409860 SPRYD3Q8NCJ5 442 aa23.65■■□□□ 1.38
C4orf48-202ENST00000409860 USP6NLQ92738 828 aa23.65■■□□□ 1.38
C4orf48-202ENST00000409860 GJB4Q9NTQ9 266 aa23.65■■□□□ 1.38
C4orf48-202ENST00000409860 DAXXQ9UER7 740 aaPredicted RBP23.65■■□□□ 1.38
C4orf48-202ENST00000409860 SMCHD1A6NHR9 2005 aa23.64■■□□□ 1.38
C4orf48-202ENST00000409860 COBLO75128 1261 aa23.64■■□□□ 1.37
C4orf48-202ENST00000409860 HOXC6P09630 235 aa23.64■■□□□ 1.37
C4orf48-202ENST00000409860 CYP2B6P20813 491 aa23.64■■□□□ 1.37
C4orf48-202ENST00000409860 FLT3LGP49771 235 aa23.64■■□□□ 1.37
C4orf48-202ENST00000409860 SAFBQ15424 915 aaKnown RBP eCLIP23.64■■□□□ 1.37
C4orf48-202ENST00000409860 LARP1BQ659C4 914 aaKnown RBP23.64■■□□□ 1.37
C4orf48-202ENST00000409860 MCTP2Q6DN12 878 aa23.64■■□□□ 1.37
C4orf48-202ENST00000409860 OTOP1Q7RTM1 612 aa23.64■■□□□ 1.37
C4orf48-202ENST00000409860 FCHSD1Q86WN1 690 aa23.64■■□□□ 1.37
C4orf48-202ENST00000409860 BLIDQ8IZY5 108 aa23.64■■□□□ 1.37
C4orf48-202ENST00000409860 FBXO18Q8NFZ0 1043 aa23.64■■□□□ 1.37
C4orf48-202ENST00000409860 ADD3Q9UEY8 706 aaKnown RBP23.64■■□□□ 1.37
C4orf48-202ENST00000409860 GABRQQ9UN88 632 aa23.64■■□□□ 1.37
C4orf48-202ENST00000409860 DIS3Q9Y2L1 958 aaKnown RBP23.64■■□□□ 1.37
C4orf48-202ENST00000409860 ZNF236Q9UL36 1845 aa23.63■■□□□ 1.37
C4orf48-202ENST00000409860 SPDYE3A6NKU9 549 aa23.63■■□□□ 1.37
C4orf48-202ENST00000409860 H3BQV1 296 aa23.63■■□□□ 1.37
C4orf48-202ENST00000409860 MMP1P03956 469 aa23.63■■□□□ 1.37
C4orf48-202ENST00000409860 GUCY1B3Q02153 619 aa23.63■■□□□ 1.37
C4orf48-202ENST00000409860 CNTN2Q02246 1040 aa23.63■■□□□ 1.37
C4orf48-202ENST00000409860 AP3B2Q13367 1082 aa23.63■■□□□ 1.37
C4orf48-202ENST00000409860 ZNF792Q3KQV3 632 aa23.63■■□□□ 1.37
C4orf48-202ENST00000409860 IFFO2Q5TF58 517 aa23.63■■□□□ 1.37
C4orf48-202ENST00000409860 EHMT1Q9H9B1 1298 aa23.63■■□□□ 1.37
C4orf48-202ENST00000409860 COL20A1Q9P218 1284 aa23.63■■□□□ 1.37
C4orf48-202ENST00000409860 PCNTO95613 3336 aa23.62■■□□□ 1.37
C4orf48-202ENST00000409860 PLXNB2O15031 1838 aa23.62■■□□□ 1.37
C4orf48-202ENST00000409860 FOSP01100 380 aaPredicted RBP23.62■■□□□ 1.37
C4orf48-202ENST00000409860 XRCC5P13010 732 aaKnown RBP23.62■■□□□ 1.37
C4orf48-202ENST00000409860 KRT2P35908 639 aa23.62■■□□□ 1.37
C4orf48-202ENST00000409860 IRF5Q13568 498 aa23.62■■□□□ 1.37
C4orf48-202ENST00000409860 DNERQ8NFT8 737 aa23.62■■□□□ 1.37
C4orf48-202ENST00000409860 RAET1EQ8TD07 263 aa23.62■■□□□ 1.37
C4orf48-202ENST00000409860 MPHOSPH6Q99547 160 aaKnown RBP23.62■■□□□ 1.37
C4orf48-202ENST00000409860 BIN2Q9UBW5 565 aaPredicted RBP23.62■■□□□ 1.37
C4orf48-202ENST00000409860 MGAMO43451 1857 aa23.62■■□□□ 1.37
C4orf48-202ENST00000409860 ZSWIM8A7E2V4 1837 aa23.61■■□□□ 1.37
C4orf48-202ENST00000409860 B4DLN1 442 aa23.61■■□□□ 1.37
C4orf48-202ENST00000409860 CLK2P49760 499 aaKnown RBP23.61■■□□□ 1.37
C4orf48-202ENST00000409860 NPY5RQ15761 445 aa23.61■■□□□ 1.37
C4orf48-202ENST00000409860 ARHGEF16Q5VV41 709 aa23.61■■□□□ 1.37
C4orf48-202ENST00000409860 JAKMIP3Q5VZ66 844 aa23.61■■□□□ 1.37
C4orf48-202ENST00000409860 CTU1Q7Z7A3 348 aaKnown RBP23.61■■□□□ 1.37
C4orf48-202ENST00000409860 ZNF467Q7Z7K2 595 aaPredicted RBP23.61■■□□□ 1.37
C4orf48-202ENST00000409860 NPLOC4Q8TAT6 608 aa23.61■■□□□ 1.37
C4orf48-202ENST00000409860 NSUN6Q8TEA1 469 aaKnown RBP23.61■■□□□ 1.37
C4orf48-202ENST00000409860 PURBQ96QR8 312 aaKnown RBP23.61■■□□□ 1.37
C4orf48-202ENST00000409860 TAAR1Q96RJ0 339 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms