RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 CUL4BQ13620 913 aa21.39■■□□□ 1.02
USP39-202ENST00000409025 NAALADL2Q58DX5 795 aa21.39■■□□□ 1.02
USP39-202ENST00000409025 ENOX1Q8TC92 643 aaKnown RBP21.39■■□□□ 1.02
USP39-202ENST00000409025 ANO3Q9BYT9 981 aa21.39■■□□□ 1.02
USP39-202ENST00000409025 MAGEF1Q9HAY2 307 aa21.39■■□□□ 1.02
USP39-202ENST00000409025 RMND1Q9NWS8 449 aa21.39■■□□□ 1.02
USP39-202ENST00000409025 IFNKQ9P0W0 207 aa21.39■■□□□ 1.02
USP39-202ENST00000409025 DDX25Q9UHL0 483 aaKnown RBP21.39■■□□□ 1.02
USP39-202ENST00000409025 SCAF8Q9UPN6 1271 aaKnown RBP21.39■■□□□ 1.02
USP39-202ENST00000409025 MYH7BA7E2Y1 1941 aa21.39■■□□□ 1.01
USP39-202ENST00000409025 MYL1P05976 194 aa21.39■■□□□ 1.01
USP39-202ENST00000409025 FANCCQ00597 558 aa21.39■■□□□ 1.01
USP39-202ENST00000409025 KIF4BQ2VIQ3 1234 aa21.39■■□□□ 1.01
USP39-202ENST00000409025 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.39■■□□□ 1.01
USP39-202ENST00000409025 NRBP1Q9UHY1 535 aa21.39■■□□□ 1.01
USP39-202ENST00000409025 HACL1Q9UJ83 578 aa21.39■■□□□ 1.01
USP39-202ENST00000409025 PHF20L1A8MW92 1017 aa21.38■■□□□ 1.01
USP39-202ENST00000409025 MEIS2O14770 477 aa21.38■■□□□ 1.01
USP39-202ENST00000409025 USP11P51784 963 aa21.38■■□□□ 1.01
USP39-202ENST00000409025 CALML4Q96GE6 196 aa21.38■■□□□ 1.01
USP39-202ENST00000409025 XPO4Q9C0E2 1151 aaKnown RBP21.38■■□□□ 1.01
USP39-202ENST00000409025 FANCLQ9NW38 375 aa21.38■■□□□ 1.01
USP39-202ENST00000409025 ATAD5Q96QE3 1844 aa21.38■■□□□ 1.01
USP39-202ENST00000409025 ZNF541Q9H0D2 1346 aa21.38■■□□□ 1.01
USP39-202ENST00000409025 PLA2G6O60733 806 aa21.37■■□□□ 1.01
USP39-202ENST00000409025 PLCG1P19174 1290 aa21.37■■□□□ 1.01
USP39-202ENST00000409025 FMR1Q06787 632 aaKnown RBP eCLIP21.37■■□□□ 1.013e-6■■■□□ 16.1
USP39-202ENST00000409025 PDIA5Q14554 519 aa21.37■■□□□ 1.01
USP39-202ENST00000409025 ZYXQ15942 572 aaKnown RBP21.37■■□□□ 1.01
USP39-202ENST00000409025 FAM160B2Q86V87 743 aa21.37■■□□□ 1.01
USP39-202ENST00000409025 PLIN2Q99541 437 aa21.37■■□□□ 1.01
USP39-202ENST00000409025 KCNF1Q9H3M0 494 aa21.37■■□□□ 1.01
USP39-202ENST00000409025 GINM1Q9NU53 330 aa21.37■■□□□ 1.01
USP39-202ENST00000409025 LRWD1Q9UFC0 647 aa21.37■■□□□ 1.01
USP39-202ENST00000409025 CBFA2T2O43439 604 aa21.37■■□□□ 1.01
USP39-202ENST00000409025 FOSP01100 380 aaPredicted RBP21.37■■□□□ 1.01
USP39-202ENST00000409025 RPN1P04843 607 aaKnown RBP21.37■■□□□ 1.01
USP39-202ENST00000409025 KBTBD4Q9NVX7 518 aa21.37■■□□□ 1.01
USP39-202ENST00000409025 GOLGB1Q14789 3259 aaKnown RBP21.36■■□□□ 1.01
USP39-202ENST00000409025 H7C1D1 291 aa21.36■■□□□ 1.01
USP39-202ENST00000409025 MARCH6O60337 910 aa21.36■■□□□ 1.01
USP39-202ENST00000409025 SERPINC1P01008 464 aa21.36■■□□□ 1.01
USP39-202ENST00000409025 ATP1A3P13637 1013 aa21.36■■□□□ 1.01
USP39-202ENST00000409025 FEZ1Q99689 392 aa21.36■■□□□ 1.01
USP39-202ENST00000409025 FEM1BQ9UK73 627 aa21.36■■□□□ 1.01
USP39-202ENST00000409025 NFE2L3Q9Y4A8 694 aa21.36■■□□□ 1.01
USP39-202ENST00000409025 SPDYE3A6NKU9 549 aa21.35■■□□□ 1.01
USP39-202ENST00000409025 CCDC144BQ3MJ40 725 aa21.35■■□□□ 1.01
USP39-202ENST00000409025 TEX2Q8IWB9 1127 aa21.35■■□□□ 1.01
USP39-202ENST00000409025 KIFC2Q96AC6 838 aa21.35■■□□□ 1.01
USP39-202ENST00000409025 MMTAG2Q9BU76 263 aaKnown RBP21.35■■□□□ 1.01
USP39-202ENST00000409025 GLIS2Q9BZE0 524 aaPredicted RBP21.35■■□□□ 1.01
USP39-202ENST00000409025 DEFB129Q9H1M3 183 aa21.35■■□□□ 1.01
USP39-202ENST00000409025 ASTN2O75129 1339 aaPredicted RBP21.35■■□□□ 1.01
USP39-202ENST00000409025 MOXD1Q6UVY6 613 aa21.35■■□□□ 1.01
USP39-202ENST00000409025 TRMT44Q8IYL2 757 aaKnown RBP21.35■■□□□ 1.01
USP39-202ENST00000409025 ZNF341Q9BYN7 854 aa21.35■■□□□ 1.01
USP39-202ENST00000409025 RANBP17Q9H2T7 1088 aaKnown RBP21.35■■□□□ 1.01
USP39-202ENST00000409025 CYP3A7-CYP3A51PA0A087WV96 503 aa21.34■■□□□ 1.01
USP39-202ENST00000409025 PPP1R3GB7ZBB8 358 aa21.34■■□□□ 1.01
USP39-202ENST00000409025 CTNND1O60716 968 aaKnown RBP21.34■■□□□ 1.01
USP39-202ENST00000409025 CD44P16070 742 aaKnown RBP21.34■■□□□ 1.01
USP39-202ENST00000409025 CYP3A7P24462 503 aa21.34■■□□□ 1.01
USP39-202ENST00000409025 UBASH3AP57075 661 aa21.34■■□□□ 1.01
USP39-202ENST00000409025 SEMA3FQ13275 785 aa21.34■■□□□ 1.01
USP39-202ENST00000409025 ZNF658Q5TYW1 1059 aaPredicted RBP21.34■■□□□ 1.01
USP39-202ENST00000409025 CCDC84Q86UT8 332 aaPredicted RBP21.34■■□□□ 1.01
USP39-202ENST00000409025 IMPACTQ9P2X3 320 aa21.34■■□□□ 1.01
USP39-202ENST00000409025 ARHGAP4P98171 946 aa21.33■■□□□ 1.01
USP39-202ENST00000409025 KLHL10Q6JEL2 608 aa21.33■■□□□ 1.01
USP39-202ENST00000409025 ARHGAP27Q6ZUM4 889 aa21.33■■□□□ 1.01
USP39-202ENST00000409025 HAS1Q92839 578 aa21.33■■□□□ 1.01
USP39-202ENST00000409025 CDK5RAP3Q96JB5 506 aa21.33■■□□□ 1.01
USP39-202ENST00000409025 SPON1Q9HCB6 807 aa21.33■■□□□ 1.01
USP39-202ENST00000409025 SYNRGQ9UMZ2 1314 aa21.33■■□□□ 1.01
USP39-202ENST00000409025 PIK3CDO00329 1044 aa21.33■■□□□ 1
USP39-202ENST00000409025 CDK11BP21127 795 aaKnown RBP21.33■■□□□ 1
USP39-202ENST00000409025 AMPD3Q01432 767 aa21.33■■□□□ 1
USP39-202ENST00000409025 KCNB1Q14721 858 aa21.33■■□□□ 1
USP39-202ENST00000409025 SPATA1Q5VX52 437 aa21.33■■□□□ 1
USP39-202ENST00000409025 KRT79Q5XKE5 535 aa21.33■■□□□ 1
USP39-202ENST00000409025 DCAF15Q66K64 600 aa21.33■■□□□ 1
USP39-202ENST00000409025 CCDC174Q6PII3 467 aa21.33■■□□□ 1
USP39-202ENST00000409025 FILIP1Q7Z7B0 1213 aa21.33■■□□□ 1
USP39-202ENST00000409025 SMYD4Q8IYR2 804 aaPredicted RBP21.33■■□□□ 1
USP39-202ENST00000409025 MBOAT7Q96N66 472 aa21.33■■□□□ 1
USP39-202ENST00000409025 MED15Q96RN5 788 aa21.33■■□□□ 1
USP39-202ENST00000409025 POTEMA6NI47 508 aa21.32■■□□□ 1
USP39-202ENST00000409025 OPLAHO14841 1288 aa21.32■■□□□ 1
USP39-202ENST00000409025 ZNF18P17022 549 aa21.32■■□□□ 1
USP39-202ENST00000409025 APOBEC3FQ8IUX4 373 aaKnown RBP21.32■■□□□ 1
USP39-202ENST00000409025 LRRC15Q8TF66 581 aa21.32■■□□□ 1
USP39-202ENST00000409025 CRYGNQ8WXF5 182 aa21.32■■□□□ 1
USP39-202ENST00000409025 HOOK2Q96ED9 719 aa21.32■■□□□ 1
USP39-202ENST00000409025 STK17AQ9UEE5 414 aa21.32■■□□□ 1
USP39-202ENST00000409025 PCDHA12Q9UN75 941 aa21.32■■□□□ 1
USP39-202ENST00000409025 TAL1P17542 331 aaPredicted RBP21.31■■□□□ 1
USP39-202ENST00000409025 LMNB1P20700 586 aa21.31■■□□□ 1
USP39-202ENST00000409025 SREBF1P36956 1147 aa21.31■■□□□ 1
USP39-202ENST00000409025 GSDMDP57764 484 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms