RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 GPR25O00155 361 aa22.33■■□□□ 1.17
MAP1LC3A-203ENST00000397709 CFBP00751 764 aa22.33■■□□□ 1.17
MAP1LC3A-203ENST00000397709 PDIA4P13667 645 aaKnown RBP22.33■■□□□ 1.17
MAP1LC3A-203ENST00000397709 KRT2P35908 639 aa22.33■■□□□ 1.17
MAP1LC3A-203ENST00000397709 RPS6P62753 249 aaKnown RBP22.33■■□□□ 1.17
MAP1LC3A-203ENST00000397709 SP3Q02447 781 aa22.33■■□□□ 1.17
MAP1LC3A-203ENST00000397709 UBE2SQ16763 222 aa22.33■■□□□ 1.17
MAP1LC3A-203ENST00000397709 WDR78Q5VTH9 848 aa22.33■■□□□ 1.17
MAP1LC3A-203ENST00000397709 USP17L6PQ6QN14 398 aa22.33■■□□□ 1.17
MAP1LC3A-203ENST00000397709 SLC30A10Q6XR72 485 aa22.33■■□□□ 1.17
MAP1LC3A-203ENST00000397709 RNF207Q6ZRF8 634 aa22.33■■□□□ 1.17
MAP1LC3A-203ENST00000397709 PLEKHH3Q7Z736 793 aa22.33■■□□□ 1.17
MAP1LC3A-203ENST00000397709 DIS3L2Q8IYB7 885 aaKnown RBP22.33■■□□□ 1.17
MAP1LC3A-203ENST00000397709 OXER1Q8TDS5 423 aa22.33■■□□□ 1.17
MAP1LC3A-203ENST00000397709 MMP19Q99542 508 aa22.33■■□□□ 1.17
MAP1LC3A-203ENST00000397709 BRMS1Q9HCU9 246 aa22.33■■□□□ 1.17
MAP1LC3A-203ENST00000397709 CYP39A1Q9NYL5 469 aa22.33■■□□□ 1.17
MAP1LC3A-203ENST00000397709 MTMR6Q9Y217 621 aa22.33■■□□□ 1.17
MAP1LC3A-203ENST00000397709 ZNF236Q9UL36 1845 aa22.33■■□□□ 1.16
MAP1LC3A-203ENST00000397709 PFASO15067 1338 aa22.32■■□□□ 1.16
MAP1LC3A-203ENST00000397709 LCTP09848 1927 aa22.32■■□□□ 1.16
MAP1LC3A-203ENST00000397709 VPS37CA5D8V6 355 aaPredicted RBP22.32■■□□□ 1.16
MAP1LC3A-203ENST00000397709 LACTBP83111 547 aaPredicted RBP22.32■■□□□ 1.16
MAP1LC3A-203ENST00000397709 BAATQ14032 418 aaPredicted RBP22.32■■□□□ 1.16
MAP1LC3A-203ENST00000397709 SAFBQ15424 915 aaKnown RBP eCLIP22.32■■□□□ 1.16
MAP1LC3A-203ENST00000397709 ABRAQ8N0Z2 381 aa22.32■■□□□ 1.16
MAP1LC3A-203ENST00000397709 REXO1Q8N1G1 1221 aaKnown RBP22.32■■□□□ 1.16
MAP1LC3A-203ENST00000397709 ANKRD35Q8N283 1001 aa22.32■■□□□ 1.16
MAP1LC3A-203ENST00000397709 SYTL5Q8TDW5 730 aaPredicted RBP22.32■■□□□ 1.16
MAP1LC3A-203ENST00000397709 PCNTO95613 3336 aa22.32■■□□□ 1.16
MAP1LC3A-203ENST00000397709 ZSWIM8A7E2V4 1837 aa22.31■■□□□ 1.16
MAP1LC3A-203ENST00000397709 BTBD18B2RXH4 712 aa22.31■■□□□ 1.16
MAP1LC3A-203ENST00000397709 STRNO43815 780 aa22.31■■□□□ 1.16
MAP1LC3A-203ENST00000397709 FCER1AP12319 257 aa22.31■■□□□ 1.16
MAP1LC3A-203ENST00000397709 PTPREP23469 700 aa22.31■■□□□ 1.16
MAP1LC3A-203ENST00000397709 CTGFP29279 349 aa22.31■■□□□ 1.16
MAP1LC3A-203ENST00000397709 HOXA13P31271 388 aaPredicted RBP22.31■■□□□ 1.16
MAP1LC3A-203ENST00000397709 GRB14Q14449 540 aa22.31■■□□□ 1.16
MAP1LC3A-203ENST00000397709 KCTD2Q14681 263 aa22.31■■□□□ 1.16
MAP1LC3A-203ENST00000397709 TNFRSF25Q93038 417 aa22.31■■□□□ 1.16
MAP1LC3A-203ENST00000397709 COL20A1Q9P218 1284 aa22.31■■□□□ 1.16
MAP1LC3A-203ENST00000397709 PCDHA6Q9UN73 950 aa22.31■■□□□ 1.16
MAP1LC3A-203ENST00000397709 PCDHA8Q9Y5H6 950 aa22.31■■□□□ 1.16
MAP1LC3A-203ENST00000397709 ZNFX1Q9P2E3 1918 aaKnown RBP22.3■■□□□ 1.16
MAP1LC3A-203ENST00000397709 NR5A1Q13285 461 aa22.3■■□□□ 1.16
MAP1LC3A-203ENST00000397709 AP3B2Q13367 1082 aa22.3■■□□□ 1.16
MAP1LC3A-203ENST00000397709 PKP1Q13835 747 aa22.3■■□□□ 1.16
MAP1LC3A-203ENST00000397709 RASGRP4Q8TDF6 673 aa22.3■■□□□ 1.16
MAP1LC3A-203ENST00000397709 FOXP1Q9H334 677 aaPredicted RBP22.3■■□□□ 1.16
MAP1LC3A-203ENST00000397709 TMEM260Q9NX78 707 aa22.3■■□□□ 1.16
MAP1LC3A-203ENST00000397709 BIN2Q9UBW5 565 aaPredicted RBP22.3■■□□□ 1.16
MAP1LC3A-203ENST00000397709 IVNS1ABPQ9Y6Y0 642 aa22.3■■□□□ 1.16
MAP1LC3A-203ENST00000397709 DNAJC25-GNG10A0A024R161 153 aa22.29■■□□□ 1.16
MAP1LC3A-203ENST00000397709 SLC15A5A6NIM6 579 aa22.29■■□□□ 1.16
MAP1LC3A-203ENST00000397709 KIF28PB7ZC32 967 aa22.29■■□□□ 1.16
MAP1LC3A-203ENST00000397709 U2AF2P26368 475 aaKnown RBP eCLIP22.29■■□□□ 1.16
MAP1LC3A-203ENST00000397709 FCGRTP55899 365 aa22.29■■□□□ 1.16
MAP1LC3A-203ENST00000397709 JAKMIP3Q5VZ66 844 aa22.29■■□□□ 1.16
MAP1LC3A-203ENST00000397709 MCTP2Q6DN12 878 aa22.29■■□□□ 1.16
MAP1LC3A-203ENST00000397709 ARHGAP39Q9C0H5 1083 aa22.29■■□□□ 1.16
MAP1LC3A-203ENST00000397709 TSKSQ9UJT2 592 aa22.29■■□□□ 1.16
MAP1LC3A-203ENST00000397709 TNPO2O14787 897 aaKnown RBP22.28■■□□□ 1.16
MAP1LC3A-203ENST00000397709 FKTNO75072 461 aa22.28■■□□□ 1.16
MAP1LC3A-203ENST00000397709 BRD1O95696 1058 aa22.28■■□□□ 1.16
MAP1LC3A-203ENST00000397709 FOSP01100 380 aaPredicted RBP22.28■■□□□ 1.16
MAP1LC3A-203ENST00000397709 ADORA2AP29274 412 aa22.28■■□□□ 1.16
MAP1LC3A-203ENST00000397709 PSMC4P43686 418 aa22.28■■□□□ 1.16
MAP1LC3A-203ENST00000397709 CAP1Q01518 475 aa22.28■■□□□ 1.16
MAP1LC3A-203ENST00000397709 MORN1Q5T089 497 aa22.28■■□□□ 1.16
MAP1LC3A-203ENST00000397709 FAM133AQ8N9E0 248 aa22.28■■□□□ 1.16
MAP1LC3A-203ENST00000397709 TRIM47Q96LD4 638 aa22.28■■□□□ 1.16
MAP1LC3A-203ENST00000397709 CIZ1Q9ULV3 898 aaPredicted RBP22.28■■□□□ 1.16
MAP1LC3A-203ENST00000397709 DOCK3Q8IZD9 2030 aa22.28■■□□□ 1.16
MAP1LC3A-203ENST00000397709 POTEB2H3BUK9 544 aa22.27■■□□□ 1.16
MAP1LC3A-203ENST00000397709 ECM2O94769 699 aaPredicted RBP22.27■■□□□ 1.16
MAP1LC3A-203ENST00000397709 ZSCAN22P10073 491 aaPredicted RBP22.27■■□□□ 1.16
MAP1LC3A-203ENST00000397709 KIF22Q14807 665 aa22.27■■□□□ 1.16
MAP1LC3A-203ENST00000397709 MCTP1Q6DN14 999 aa22.27■■□□□ 1.16
MAP1LC3A-203ENST00000397709 KRT25Q7Z3Z0 450 aa22.27■■□□□ 1.16
MAP1LC3A-203ENST00000397709 FCHSD1Q86WN1 690 aa22.27■■□□□ 1.16
MAP1LC3A-203ENST00000397709 ZNF296Q8WUU4 475 aaPredicted RBP22.27■■□□□ 1.16
MAP1LC3A-203ENST00000397709 PURBQ96QR8 312 aaKnown RBP22.27■■□□□ 1.16
MAP1LC3A-203ENST00000397709 ANO3Q9BYT9 981 aa22.27■■□□□ 1.16
MAP1LC3A-203ENST00000397709 ZDHHC9Q9Y397 364 aa22.27■■□□□ 1.16
MAP1LC3A-203ENST00000397709 FRMPD4Q14CM0 1322 aa22.27■■□□□ 1.16
MAP1LC3A-203ENST00000397709 SPDYE3A6NKU9 549 aa22.26■■□□□ 1.15
MAP1LC3A-203ENST00000397709 COBLO75128 1261 aa22.26■■□□□ 1.15
MAP1LC3A-203ENST00000397709 PGK2P07205 417 aa22.26■■□□□ 1.15
MAP1LC3A-203ENST00000397709 RESTQ13127 1097 aa22.26■■□□□ 1.15
MAP1LC3A-203ENST00000397709 EARS2Q5JPH6 523 aaKnown RBP22.26■■□□□ 1.15
MAP1LC3A-203ENST00000397709 NOSTRINQ8IVI9 506 aa22.26■■□□□ 1.15
MAP1LC3A-203ENST00000397709 CD99L2Q8TCZ2 262 aa22.26■■□□□ 1.15
MAP1LC3A-203ENST00000397709 SOCS4Q8WXH5 440 aa22.26■■□□□ 1.15
MAP1LC3A-203ENST00000397709 USP6NLQ92738 828 aa22.26■■□□□ 1.15
MAP1LC3A-203ENST00000397709 ERO1AQ96HE7 468 aa22.26■■□□□ 1.15
MAP1LC3A-203ENST00000397709 PGBD1Q96JS3 809 aa22.26■■□□□ 1.15
MAP1LC3A-203ENST00000397709 TAAR1Q96RJ0 339 aa22.26■■□□□ 1.15
MAP1LC3A-203ENST00000397709 GJD2Q9UKL4 321 aa22.26■■□□□ 1.15
MAP1LC3A-203ENST00000397709 RPTORQ8N122 1335 aa22.26■■□□□ 1.15
MAP1LC3A-203ENST00000397709 PLXNA1Q9UIW2 1896 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms