RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 MB21D1Q8N884 522 aa11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 PANX2Q96RD6 677 aa11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 TSG101Q99816 390 aa11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 DDX4Q9NQI0 724 aaKnown RBP11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 PCDHA12Q9UN75 941 aa11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 CLRN2A0PK11 232 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 BICDL2A1A5D9 508 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 EFCAB8A8MWE9 144 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 PDHBP11177 359 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 STAT3P40763 770 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 ERVK-24P63145 666 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 DDR1Q08345 913 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 CNNM4Q6P4Q7 775 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 KRT26Q7Z3Y9 468 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 ADGRF4Q8IZF3 695 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 GPR75-ASB3A0A0A6YYF3 556 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 TTLL1O95922 423 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 HOXA13P31271 388 aaPredicted RBP11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 C16orf86Q6ZW13 317 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 SH3RF1Q7Z6J0 888 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 TMEM139Q8IV31 216 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 ZFPM1Q8IX07 1006 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 LARP4BQ92615 738 aaKnown RBP11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 JAKMIP2Q96AA8 810 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 MTMR4Q9NYA4 1195 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 SRCAPQ6ZRS2 3230 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 SPEF2Q9C093 1822 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 TADA3O75528 432 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 CYLC1P35663 651 aaPredicted RBP11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 TBX2Q13207 712 aaPredicted RBP11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 HSP90B2PQ58FF3 399 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 SLC30A10Q6XR72 485 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 ADSSL1Q8N142 457 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 CCDC155Q8N6L0 562 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 BBXQ8WY36 941 aaPredicted RBP11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 TRIM9Q9C026 710 aa11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 MYH14Q7Z406 1995 aaKnown RBP11.64□□□□□ -0.55
CPSF1P1-201ENST00000397477 NPHP3-ACAD11A0A0J9YXS1 232 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 E9PMD0 336 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 TUBB4AP04350 444 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 CERKLQ49MI3 558 aaPredicted RBP11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 NAALADL2Q58DX5 795 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 CCDC181Q5TID7 509 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 MAEAQ7L5Y9 396 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 FAM114A1Q8IWE2 563 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 CUL5Q93034 780 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 NUDT12Q9BQG2 462 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 SH3GLB2Q9NR46 395 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 ITGB4P16144 1822 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 TCP10L2B9ZVM9 353 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 FANCGO15287 622 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 NDUFA10O95299 355 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 PNMA6AP0CW24 399 aaPredicted RBP11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 HSPA1LP34931 641 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 KIF5AQ12840 1032 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 CDKAL1Q5VV42 579 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 SLFN13Q68D06 897 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 RGS22Q8NE09 1264 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 L2HGDHQ9H9P8 463 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 TRPC5Q9UL62 973 aaPredicted RBP11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 ROBO1Q9Y6N7 1651 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 FGRP09769 529 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 CXCR5P32302 372 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 PPP4CP60510 307 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 MAPK8IP2Q13387 824 aaPredicted RBP11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 SEPT2Q15019 361 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 RBM26Q5T8P6 1007 aaKnown RBP11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 KRT27Q7Z3Y8 459 aa11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 NAA15Q9BXJ9 866 aaKnown RBP11.63□□□□□ -0.55
CPSF1P1-201ENST00000397477 SPDYE3A6NKU9 549 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 ZSCAN20P17040 1043 aaPredicted RBP11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 GPS2Q13227 327 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 PABPC4Q13310 644 aaKnown RBP eCLIP11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 CCDC174Q6PII3 467 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 GLIS3Q8NEA6 775 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 DDX12PQ92771 950 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 ZMYND12Q9H0C1 365 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 TDRD3Q9H7E2 651 aaKnown RBP11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 SUGCTQ9HAC7 445 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 MYMKA6NI61 221 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 BUB1O43683 1085 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 KRT86O43790 486 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 ERLIN1O75477 346 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 CFBP00751 764 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 CCNE1P24864 410 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 CHRNA5P30532 468 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 DNM2P50570 870 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 DCAF17Q5H9S7 520 aaPredicted RBP11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 GALNT17Q6IS24 598 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 CEP112Q8N8E3 955 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 CDC23Q9UJX2 597 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 DOT1LQ8TEK3 1739 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 UBR2Q8IWV8 1755 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 COL4A1P02462 1669 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 LMAN1P49257 510 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 RHBDL3P58872 404 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 GPBP1Q86WP2 473 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 SPATA20Q8TB22 786 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 SEPT11Q9NVA2 429 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms