RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 BRDTQ58F21 947 aaPredicted RBP23.37■■□□□ 1.33
UPK3B-203ENST00000394849 FBXO16Q8IX29 292 aaPredicted RBP23.37■■□□□ 1.33
UPK3B-203ENST00000394849 GPHNQ9NQX3 736 aaPredicted RBP23.37■■□□□ 1.33
UPK3B-203ENST00000394849 MTCH2Q9Y6C9 303 aa23.37■■□□□ 1.33
UPK3B-203ENST00000394849 TNKSO95271 1327 aa23.36■■□□□ 1.33
UPK3B-203ENST00000394849 KIF28PB7ZC32 967 aa23.36■■□□□ 1.33
UPK3B-203ENST00000394849 MCCP23508 829 aa23.36■■□□□ 1.33
UPK3B-203ENST00000394849 TTLL4Q14679 1199 aa23.36■■□□□ 1.33
UPK3B-203ENST00000394849 EEPD1Q7L9B9 569 aa23.36■■□□□ 1.33
UPK3B-203ENST00000394849 VWCEQ96DN2 955 aa23.36■■□□□ 1.33
UPK3B-203ENST00000394849 NECAB3Q96P71 396 aaPredicted RBP23.36■■□□□ 1.33
UPK3B-203ENST00000394849 PITPNM1O00562 1244 aa23.35■■□□□ 1.33
UPK3B-203ENST00000394849 KPNA6O60684 536 aa23.35■■□□□ 1.33
UPK3B-203ENST00000394849 CA3P07451 260 aa23.35■■□□□ 1.33
UPK3B-203ENST00000394849 PURAQ00577 322 aaKnown RBP23.35■■□□□ 1.33
UPK3B-203ENST00000394849 CCPG1Q9ULG6 757 aa23.35■■□□□ 1.33
UPK3B-203ENST00000394849 PRR12Q9ULL5 1215 aa23.35■■□□□ 1.33
UPK3B-203ENST00000394849 HCN4Q9Y3Q4 1203 aa23.35■■□□□ 1.33
UPK3B-203ENST00000394849 RAD50Q92878 1312 aa23.34■■□□□ 1.33
UPK3B-203ENST00000394849 ICAM1P05362 532 aa23.34■■□□□ 1.33
UPK3B-203ENST00000394849 KCNQ1P51787 676 aa23.34■■□□□ 1.33
UPK3B-203ENST00000394849 MUM1L1Q5H9M0 696 aa23.34■■□□□ 1.33
UPK3B-203ENST00000394849 NSMFQ6X4W1 530 aa23.34■■□□□ 1.33
UPK3B-203ENST00000394849 MTG1Q9BT17 334 aaPredicted RBP23.34■■□□□ 1.33
UPK3B-203ENST00000394849 WDR11Q9BZH6 1224 aa23.34■■□□□ 1.33
UPK3B-203ENST00000394849 NAPBQ9H115 298 aa23.34■■□□□ 1.33
UPK3B-203ENST00000394849 TRMT13Q9NUP7 481 aaKnown RBP23.34■■□□□ 1.33
UPK3B-203ENST00000394849 PNMA2Q9UL42 364 aa23.34■■□□□ 1.33
UPK3B-203ENST00000394849 STX8Q9UNK0 236 aa23.34■■□□□ 1.33
UPK3B-203ENST00000394849 CYP2C9P11712 490 aa23.33■■□□□ 1.33
UPK3B-203ENST00000394849 PTPN11Q06124 597 aaPredicted RBP23.33■■□□□ 1.33
UPK3B-203ENST00000394849 PPARAQ07869 468 aa23.33■■□□□ 1.33
UPK3B-203ENST00000394849 NFRKBQ6P4R8 1299 aa23.33■■□□□ 1.33
UPK3B-203ENST00000394849 DEFB128Q7Z7B8 93 aa23.33■■□□□ 1.33
UPK3B-203ENST00000394849 RETREG2Q8NC44 543 aa23.33■■□□□ 1.33
UPK3B-203ENST00000394849 MPHOSPH6Q99547 160 aaKnown RBP23.33■■□□□ 1.33
UPK3B-203ENST00000394849 RBM47A0AV96 593 aaKnown RBP23.32■■□□□ 1.32
UPK3B-203ENST00000394849 M0R2C6 588 aa23.32■■□□□ 1.32
UPK3B-203ENST00000394849 NKRFO15226 690 aaKnown RBP eCLIP23.32■■□□□ 1.32
UPK3B-203ENST00000394849 SMARCA5O60264 1052 aaPredicted RBP23.32■■□□□ 1.32
UPK3B-203ENST00000394849 HOXD11P31277 338 aaPredicted RBP23.32■■□□□ 1.32
UPK3B-203ENST00000394849 BFSP2Q13515 415 aa23.32■■□□□ 1.32
UPK3B-203ENST00000394849 KCTD1Q719H9 257 aa23.32■■□□□ 1.32
UPK3B-203ENST00000394849 SCN10AQ9Y5Y9 1956 aa23.32■■□□□ 1.32
UPK3B-203ENST00000394849 TSPY2A6NKD2 308 aa23.31■■□□□ 1.32
UPK3B-203ENST00000394849 BAIAP3O94812 1187 aa23.31■■□□□ 1.32
UPK3B-203ENST00000394849 HLA-CQ95604 372 aa23.31■■□□□ 1.32
UPK3B-203ENST00000394849 LCTP09848 1927 aa23.31■■□□□ 1.32
UPK3B-203ENST00000394849 SCN5AQ14524 2016 aa23.3■■□□□ 1.32
UPK3B-203ENST00000394849 MYL3P08590 195 aa23.3■■□□□ 1.32
UPK3B-203ENST00000394849 IQCF3P0C7M6 154 aa23.3■■□□□ 1.32
UPK3B-203ENST00000394849 PTGS1P23219 599 aa23.3■■□□□ 1.32
UPK3B-203ENST00000394849 ALDH5A1P51649 535 aaPredicted RBP23.3■■□□□ 1.32
UPK3B-203ENST00000394849 TAP1Q03518 808 aa23.3■■□□□ 1.32
UPK3B-203ENST00000394849 HERC6Q8IVU3 1022 aa23.3■■□□□ 1.32
UPK3B-203ENST00000394849 OR6J1Q8NGC5 347 aa23.3■■□□□ 1.32
UPK3B-203ENST00000394849 DCAF4Q8WV16 495 aa23.3■■□□□ 1.32
UPK3B-203ENST00000394849 B4DLN1 442 aa23.29■■□□□ 1.32
UPK3B-203ENST00000394849 TLL1O43897 1013 aa23.29■■□□□ 1.32
UPK3B-203ENST00000394849 MRPL12P52815 198 aaKnown RBP23.29■■□□□ 1.32
UPK3B-203ENST00000394849 BAATQ14032 418 aaPredicted RBP23.29■■□□□ 1.32
UPK3B-203ENST00000394849 FAM47CQ5HY64 1035 aa23.29■■□□□ 1.32
UPK3B-203ENST00000394849 TMEM31Q5JXX7 168 aa23.29■■□□□ 1.32
UPK3B-203ENST00000394849 TMEM63BQ5T3F8 832 aa23.29■■□□□ 1.32
UPK3B-203ENST00000394849 ARNTL2Q8WYA1 636 aa23.29■■□□□ 1.32
UPK3B-203ENST00000394849 LRFN3Q9BTN0 628 aa23.29■■□□□ 1.32
UPK3B-203ENST00000394849 FTOQ9C0B1 505 aaKnown RBP eCLIP23.29■■□□□ 1.32
UPK3B-203ENST00000394849 RANBP17Q9H2T7 1088 aaKnown RBP23.29■■□□□ 1.32
UPK3B-203ENST00000394849 LMCD1Q9NZU5 365 aa23.29■■□□□ 1.32
UPK3B-203ENST00000394849 DDX49Q9Y6V7 483 aaKnown RBP23.29■■□□□ 1.32
UPK3B-203ENST00000394849 RFXAPO00287 272 aa23.28■■□□□ 1.32
UPK3B-203ENST00000394849 PPP2R5BQ15173 497 aa23.28■■□□□ 1.32
UPK3B-203ENST00000394849 NBPF20Q3BBV1 942 aa23.28■■□□□ 1.32
UPK3B-203ENST00000394849 BTNL9Q6UXG8 535 aa23.28■■□□□ 1.32
UPK3B-203ENST00000394849 CCDC155Q8N6L0 562 aa23.28■■□□□ 1.32
UPK3B-203ENST00000394849 SCFD2Q8WU76 684 aa23.28■■□□□ 1.32
UPK3B-203ENST00000394849 CERS4Q9HA82 394 aa23.28■■□□□ 1.32
UPK3B-203ENST00000394849 TANC1Q9C0D5 1861 aa23.28■■□□□ 1.32
UPK3B-203ENST00000394849 A6NJR5 290 aa23.27■■□□□ 1.32
UPK3B-203ENST00000394849 SNAP25P60880 206 aa23.27■■□□□ 1.32
UPK3B-203ENST00000394849 IL17RBQ9NRM6 502 aa23.27■■□□□ 1.32
UPK3B-203ENST00000394849 NOD1Q9Y239 953 aa23.27■■□□□ 1.32
UPK3B-203ENST00000394849 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.27■■□□□ 1.32
UPK3B-203ENST00000394849 TTC41PQ6P2S7 1318 aa23.27■■□□□ 1.32
UPK3B-203ENST00000394849 PTPDC1A2A3K4 754 aa23.26■■□□□ 1.31
UPK3B-203ENST00000394849 PARNO95453 639 aaKnown RBP23.26■■□□□ 1.31
UPK3B-203ENST00000394849 KCNJ6P48051 423 aa23.26■■□□□ 1.31
UPK3B-203ENST00000394849 NOVP48745 357 aa23.26■■□□□ 1.31
UPK3B-203ENST00000394849 PDE4DQ08499 809 aa23.26■■□□□ 1.31
UPK3B-203ENST00000394849 CCDC96Q2M329 555 aa23.26■■□□□ 1.31
UPK3B-203ENST00000394849 DNERQ8NFT8 737 aa23.26■■□□□ 1.31
UPK3B-203ENST00000394849 PURBQ96QR8 312 aaKnown RBP23.26■■□□□ 1.31
UPK3B-203ENST00000394849 EPHX3Q9H6B9 360 aa23.26■■□□□ 1.31
UPK3B-203ENST00000394849 DCTPP1Q9H773 170 aa23.26■■□□□ 1.31
UPK3B-203ENST00000394849 EPOPA6NHQ4 379 aa23.25■■□□□ 1.31
UPK3B-203ENST00000394849 GPR37L1O60883 481 aa23.25■■□□□ 1.31
UPK3B-203ENST00000394849 CAGE1Q8TC20 777 aa23.25■■□□□ 1.31
UPK3B-203ENST00000394849 CHMP4CQ96CF2 233 aa23.25■■□□□ 1.31
UPK3B-203ENST00000394849 GRB10Q13322 594 aa23.24■■□□□ 1.31
UPK3B-203ENST00000394849 ZMYM1Q5SVZ6 1142 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms