RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 FCER1AP12319 257 aa15.26■□□□□ 0.03
USP44-202ENST00000393091 GJB2P29033 226 aa15.26■□□□□ 0.03
USP44-202ENST00000393091 MRPL12P52815 198 aaKnown RBP15.26■□□□□ 0.03
USP44-202ENST00000393091 MOXD1Q6UVY6 613 aa15.26■□□□□ 0.03
USP44-202ENST00000393091 CTDP1Q9Y5B0 961 aaPredicted RBP15.26■□□□□ 0.03
USP44-202ENST00000393091 TRPA1O75762 1119 aa15.25■□□□□ 0.03
USP44-202ENST00000393091 CAPN2P17655 700 aa15.25■□□□□ 0.03
USP44-202ENST00000393091 ADCY7P51828 1080 aa15.25■□□□□ 0.03
USP44-202ENST00000393091 TRIM47Q96LD4 638 aa15.25■□□□□ 0.03
USP44-202ENST00000393091 MBOAT7Q96N66 472 aa15.25■□□□□ 0.03
USP44-202ENST00000393091 RBM19Q9Y4C8 960 aaKnown RBP15.25■□□□□ 0.03
USP44-202ENST00000393091 MAP2K5Q13163 448 aa15.25■□□□□ 0.03
USP44-202ENST00000393091 PXYLP1Q8TE99 480 aa15.25■□□□□ 0.03
USP44-202ENST00000393091 SMC3Q9UQE7 1217 aa15.25■□□□□ 0.03
USP44-202ENST00000393091 CTCFP49711 727 aaPredicted RBP15.24■□□□□ 0.03
USP44-202ENST00000393091 SYTL5Q8TDW5 730 aaPredicted RBP15.24■□□□□ 0.03
USP44-202ENST00000393091 COA7Q96BR5 231 aa15.24■□□□□ 0.03
USP44-202ENST00000393091 MMP19Q99542 508 aa15.24■□□□□ 0.03
USP44-202ENST00000393091 PSTPIP2Q9H939 334 aa15.24■□□□□ 0.03
USP44-202ENST00000393091 VAT1LQ9HCJ6 419 aa15.24■□□□□ 0.03
USP44-202ENST00000393091 DOCK3Q8IZD9 2030 aa15.24■□□□□ 0.03
USP44-202ENST00000393091 RBM47A0AV96 593 aaKnown RBP15.24■□□□□ 0.03
USP44-202ENST00000393091 GCOM1H8Y6P7 765 aaPredicted RBP15.24■□□□□ 0.03
USP44-202ENST00000393091 NFIBO00712 420 aa15.24■□□□□ 0.03
USP44-202ENST00000393091 POLR2MP0CAP2 368 aa15.24■□□□□ 0.03
USP44-202ENST00000393091 NIPA1Q7RTP0 329 aa15.24■□□□□ 0.03
USP44-202ENST00000393091 ZNF296Q8WUU4 475 aaPredicted RBP15.24■□□□□ 0.03
USP44-202ENST00000393091 MTMR7Q9Y216 660 aa15.24■□□□□ 0.03
USP44-202ENST00000393091 SNAP25P60880 206 aa15.24■□□□□ 0.03
USP44-202ENST00000393091 NKX3-2P78367 333 aa15.24■□□□□ 0.03
USP44-202ENST00000393091 KIF22Q14807 665 aa15.24■□□□□ 0.03
USP44-202ENST00000393091 HEATR3Q7Z4Q2 680 aa15.24■□□□□ 0.03
USP44-202ENST00000393091 NAP1L2Q9ULW6 460 aaPredicted RBP15.24■□□□□ 0.03
USP44-202ENST00000393091 CYP3A7-CYP3A51PA0A087WV96 503 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 SMCO2A6NFE2 343 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 CYP3A7P24462 503 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 HOXD10P28358 340 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 CIITAP33076 1130 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 SREBF1P36956 1147 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 NAPAP54920 295 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 CAP1Q01518 475 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 RNF207Q6ZRF8 634 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 APBA2Q99767 749 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 PAGR1Q9BTK6 254 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 BEGAINQ9BUH8 593 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 EFCC1Q9HA90 598 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 SLC5A4Q9NY91 659 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 PCDHA6Q9UN73 950 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 PCDHA8Q9Y5H6 950 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 ASTN1O14525 1302 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 ALAS1P13196 640 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 PKN2Q16513 984 aaKnown RBP15.23■□□□□ 0.03
USP44-202ENST00000393091 KRT40Q6A162 431 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 BLIDQ8IZY5 108 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 GPKOWQ92917 476 aaPredicted RBP eCLIP15.23■□□□□ 0.03
USP44-202ENST00000393091 SRRDQ9UH36 339 aa15.23■□□□□ 0.03
USP44-202ENST00000393091 CIZ1Q9ULV3 898 aaPredicted RBP15.23■□□□□ 0.03
USP44-202ENST00000393091 RGS2P41220 211 aa15.22■□□□□ 0.03
USP44-202ENST00000393091 HOMER1Q86YM7 354 aa15.22■□□□□ 0.03
USP44-202ENST00000393091 PCNX4Q63HM2 1172 aa15.22■□□□□ 0.03
USP44-202ENST00000393091 NOL8Q76FK4 1167 aaKnown RBP15.22■□□□□ 0.03
USP44-202ENST00000393091 KATNBL1Q9H079 304 aa15.22■□□□□ 0.03
USP44-202ENST00000393091 WDR81Q562E7 1941 aa15.22■□□□□ 0.03
USP44-202ENST00000393091 ANP32AP39687 249 aaKnown RBP15.22■□□□□ 0.03
USP44-202ENST00000393091 USP11P51784 963 aa15.22■□□□□ 0.03
USP44-202ENST00000393091 RPS6P62753 249 aaKnown RBP15.22■□□□□ 0.03
USP44-202ENST00000393091 KCTD2Q14681 263 aa15.22■□□□□ 0.03
USP44-202ENST00000393091 KRT25Q7Z3Z0 450 aa15.22■□□□□ 0.03
USP44-202ENST00000393091 NCAPG2Q86XI2 1143 aa15.22■□□□□ 0.03
USP44-202ENST00000393091 C8orf76Q96K31 380 aa15.22■□□□□ 0.03
USP44-202ENST00000393091 NAP1L4Q99733 375 aaKnown RBP15.22■□□□□ 0.03
USP44-202ENST00000393091 COL20A1Q9P218 1284 aa15.22■□□□□ 0.03
USP44-202ENST00000393091 ADD3Q9UEY8 706 aaKnown RBP15.22■□□□□ 0.03
USP44-202ENST00000393091 SOWAHBA6NEL2 793 aa15.21■□□□□ 0.03
USP44-202ENST00000393091 FOXN1O15353 648 aa15.21■□□□□ 0.03
USP44-202ENST00000393091 COBLO75128 1261 aa15.21■□□□□ 0.03
USP44-202ENST00000393091 ADORA2AP29274 412 aa15.21■□□□□ 0.03
USP44-202ENST00000393091 TRAPPC10P48553 1259 aa15.21■□□□□ 0.03
USP44-202ENST00000393091 SLC30A10Q6XR72 485 aa15.21■□□□□ 0.03
USP44-202ENST00000393091 CPXCR1Q8N123 301 aa15.21■□□□□ 0.03
USP44-202ENST00000393091 NUDT12Q9BQG2 462 aa15.21■□□□□ 0.03
USP44-202ENST00000393091 EHMT1Q9H9B1 1298 aa15.21■□□□□ 0.03
USP44-202ENST00000393091 PXMP2Q9NR77 195 aa15.21■□□□□ 0.03
USP44-202ENST00000393091 VPS54Q9P1Q0 977 aa15.21■□□□□ 0.03
USP44-202ENST00000393091 EDIL3O43854 480 aa15.21■□□□□ 0.03
USP44-202ENST00000393091 KRT2P35908 639 aa15.21■□□□□ 0.03
USP44-202ENST00000393091 PSMC4P43686 418 aa15.21■□□□□ 0.03
USP44-202ENST00000393091 USH1GQ495M9 461 aa15.21■□□□□ 0.03
USP44-202ENST00000393091 AIFM3Q96NN9 605 aa15.21■□□□□ 0.03
USP44-202ENST00000393091 ASB14A6NK59 587 aa15.2■□□□□ 0.02
USP44-202ENST00000393091 ALDH5A1P51649 535 aaPredicted RBP15.2■□□□□ 0.02
USP44-202ENST00000393091 REXO1Q8N1G1 1221 aaKnown RBP15.2■□□□□ 0.02
USP44-202ENST00000393091 FAM184AQ8NB25 1140 aa15.2■□□□□ 0.02
USP44-202ENST00000393091 MAML3Q96JK9 1138 aa15.2■□□□□ 0.02
USP44-202ENST00000393091 B4DLN1 442 aa15.2■□□□□ 0.02
USP44-202ENST00000393091 ICAM3P32942 547 aa15.2■□□□□ 0.02
USP44-202ENST00000393091 BAATQ14032 418 aaPredicted RBP15.2■□□□□ 0.02
USP44-202ENST00000393091 MAP3K21Q5TCX8 1036 aa15.2■□□□□ 0.02
USP44-202ENST00000393091 CCDC82Q8N4S0 544 aa15.2■□□□□ 0.02
USP44-202ENST00000393091 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms