RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 SEPT4O43236 478 aa13.46□□□□□ -0.25
APOBEC3F-202ENST00000381565 PPP1R11O60927 126 aaPredicted RBP13.46□□□□□ -0.25
APOBEC3F-202ENST00000381565 CNGA1P29973 690 aa13.46□□□□□ -0.25
APOBEC3F-202ENST00000381565 ANO1Q5XXA6 986 aa13.46□□□□□ -0.25
APOBEC3F-202ENST00000381565 ZNF654Q8IZM8 581 aa13.46□□□□□ -0.25
APOBEC3F-202ENST00000381565 MSL3Q8N5Y2 521 aaKnown RBP13.46□□□□□ -0.25
APOBEC3F-202ENST00000381565 KCNB2Q92953 911 aa13.46□□□□□ -0.25
APOBEC3F-202ENST00000381565 LENG1Q96BZ8 264 aaPredicted RBP13.46□□□□□ -0.25
APOBEC3F-202ENST00000381565 MYL10Q9BUA6 226 aa13.46□□□□□ -0.25
APOBEC3F-202ENST00000381565 LRRC2Q9BYS8 371 aa13.46□□□□□ -0.25
APOBEC3F-202ENST00000381565 NRBP1Q9UHY1 535 aa13.46□□□□□ -0.25
APOBEC3F-202ENST00000381565 MYH7BA7E2Y1 1941 aa13.46□□□□□ -0.25
APOBEC3F-202ENST00000381565 DOCK5Q9H7D0 1870 aa13.46□□□□□ -0.26
APOBEC3F-202ENST00000381565 POTEB2H3BUK9 544 aa13.45□□□□□ -0.26
APOBEC3F-202ENST00000381565 ADCY6O43306 1168 aa13.45□□□□□ -0.26
APOBEC3F-202ENST00000381565 CYTH3O43739 400 aa13.45□□□□□ -0.26
APOBEC3F-202ENST00000381565 MSCO60682 206 aa13.45□□□□□ -0.26
APOBEC3F-202ENST00000381565 HSPA4P34932 840 aa13.45□□□□□ -0.26
APOBEC3F-202ENST00000381565 MDM2Q00987 491 aaPredicted RBP13.45□□□□□ -0.26
APOBEC3F-202ENST00000381565 USH1GQ495M9 461 aa13.45□□□□□ -0.26
APOBEC3F-202ENST00000381565 RNF20Q5VTR2 975 aa13.45□□□□□ -0.26
APOBEC3F-202ENST00000381565 NSMFQ6X4W1 530 aa13.45□□□□□ -0.26
APOBEC3F-202ENST00000381565 ARMCX2Q7L311 632 aa13.45□□□□□ -0.26
APOBEC3F-202ENST00000381565 CCDC144CPQ8IYA2 1237 aa13.45□□□□□ -0.26
APOBEC3F-202ENST00000381565 ZNF579Q8NAF0 562 aaKnown RBP13.45□□□□□ -0.26
APOBEC3F-202ENST00000381565 TMEM87BQ96K49 555 aa13.45□□□□□ -0.26
APOBEC3F-202ENST00000381565 TCEANC2Q96MN5 208 aa13.45□□□□□ -0.26
APOBEC3F-202ENST00000381565 GUCD1Q96NT3 240 aa13.45□□□□□ -0.26
APOBEC3F-202ENST00000381565 OPLAHO14841 1288 aa13.44□□□□□ -0.26
APOBEC3F-202ENST00000381565 DDAH1O94760 285 aa13.44□□□□□ -0.26
APOBEC3F-202ENST00000381565 LIFRP42702 1097 aa13.44□□□□□ -0.26
APOBEC3F-202ENST00000381565 EXOSC10Q01780 885 aaKnown RBP13.44□□□□□ -0.26
APOBEC3F-202ENST00000381565 BAATQ14032 418 aaPredicted RBP13.44□□□□□ -0.26
APOBEC3F-202ENST00000381565 NEK1Q96PY6 1258 aa13.44□□□□□ -0.26
APOBEC3F-202ENST00000381565 RIOX1Q9H6W3 641 aa13.44□□□□□ -0.26
APOBEC3F-202ENST00000381565 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.44□□□□□ -0.26
APOBEC3F-202ENST00000381565 SNX14Q9Y5W7 946 aa13.44□□□□□ -0.26
APOBEC3F-202ENST00000381565 PRUNE2Q8WUY3 3088 aa13.44□□□□□ -0.26
APOBEC3F-202ENST00000381565 ABCB11O95342 1321 aa13.43□□□□□ -0.26
APOBEC3F-202ENST00000381565 DHX16O60231 1041 aaKnown RBP13.43□□□□□ -0.26
APOBEC3F-202ENST00000381565 CPA1P15085 419 aa13.43□□□□□ -0.26
APOBEC3F-202ENST00000381565 RXRAP19793 462 aa13.43□□□□□ -0.26
APOBEC3F-202ENST00000381565 RPS6P62753 249 aaKnown RBP13.43□□□□□ -0.26
APOBEC3F-202ENST00000381565 CATIPQ7Z7H3 387 aa13.43□□□□□ -0.26
APOBEC3F-202ENST00000381565 SGMS1Q86VZ5 419 aa13.43□□□□□ -0.26
APOBEC3F-202ENST00000381565 RAB11FIP4Q86YS3 637 aa13.43□□□□□ -0.26
APOBEC3F-202ENST00000381565 MORC4Q8TE76 937 aa13.43□□□□□ -0.26
APOBEC3F-202ENST00000381565 MAP3K14Q99558 947 aa13.43□□□□□ -0.26
APOBEC3F-202ENST00000381565 COL25A1Q9BXS0 654 aaPredicted RBP13.43□□□□□ -0.26
APOBEC3F-202ENST00000381565 VAT1LQ9HCJ6 419 aa13.43□□□□□ -0.26
APOBEC3F-202ENST00000381565 PNMA2Q9UL42 364 aa13.43□□□□□ -0.26
APOBEC3F-202ENST00000381565 CNPY2Q9Y2B0 182 aa13.43□□□□□ -0.26
APOBEC3F-202ENST00000381565 PTPDC1A2A3K4 754 aa13.42□□□□□ -0.26
APOBEC3F-202ENST00000381565 ZBTB5O15062 677 aa13.42□□□□□ -0.26
APOBEC3F-202ENST00000381565 REC8O95072 547 aa13.42□□□□□ -0.26
APOBEC3F-202ENST00000381565 PLEKHA8P1O95397 391 aa13.42□□□□□ -0.26
APOBEC3F-202ENST00000381565 AKR1A1P14550 325 aa13.42□□□□□ -0.26
APOBEC3F-202ENST00000381565 ALDH5A1P51649 535 aaPredicted RBP13.42□□□□□ -0.26
APOBEC3F-202ENST00000381565 ACVR2BQ13705 512 aa13.42□□□□□ -0.26
APOBEC3F-202ENST00000381565 RNF207Q6ZRF8 634 aa13.42□□□□□ -0.26
APOBEC3F-202ENST00000381565 FBXO11Q86XK2 927 aa13.42□□□□□ -0.26
APOBEC3F-202ENST00000381565 NUP133Q8WUM0 1156 aa13.42□□□□□ -0.26
APOBEC3F-202ENST00000381565 TBC1D5Q92609 795 aa13.42□□□□□ -0.26
APOBEC3F-202ENST00000381565 PIGSQ96S52 555 aa13.42□□□□□ -0.26
APOBEC3F-202ENST00000381565 COL20A1Q9P218 1284 aa13.42□□□□□ -0.26
APOBEC3F-202ENST00000381565 ZHX1Q9UKY1 873 aaPredicted RBP13.42□□□□□ -0.26
APOBEC3F-202ENST00000381565 SYNRGQ9UMZ2 1314 aa13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 CCDC69A6NI79 296 aa13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 DNM1LO00429 736 aa13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 ADAMTS4O75173 837 aa13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 CALML3P27482 149 aa13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 GHRHRQ02643 423 aa13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 KRT32Q14532 448 aa13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 LRRC41Q15345 812 aa13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 CCDC144BQ3MJ40 725 aa13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 GJC2Q5T442 439 aaPredicted RBP13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 FAM109BQ6ICB4 259 aaPredicted RBP13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 APOA5Q6Q788 366 aa13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 NFXL1Q6ZNB6 911 aa13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 DHX32Q7L7V1 743 aaKnown RBP13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 HOMER1Q86YM7 354 aa13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 KIF12Q96FN5 646 aa13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 SPZ1Q9BXG8 430 aa13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 AMNQ9BXJ7 453 aa13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 ABHD16BQ9H3Z7 469 aa13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 BRPF3Q9ULD4 1205 aa13.41□□□□□ -0.26
APOBEC3F-202ENST00000381565 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.4□□□□□ -0.26
APOBEC3F-202ENST00000381565 MYADML2A6NDP7 307 aa13.4□□□□□ -0.26
APOBEC3F-202ENST00000381565 ASB14A6NK59 587 aa13.4□□□□□ -0.26
APOBEC3F-202ENST00000381565 EPB41L2O43491 1005 aaKnown RBP13.4□□□□□ -0.26
APOBEC3F-202ENST00000381565 PGK1P00558 417 aa13.4□□□□□ -0.26
APOBEC3F-202ENST00000381565 RARBP10826 455 aa13.4□□□□□ -0.26
APOBEC3F-202ENST00000381565 PTGS1P23219 599 aa13.4□□□□□ -0.26
APOBEC3F-202ENST00000381565 EDNRBP24530 442 aa13.4□□□□□ -0.26
APOBEC3F-202ENST00000381565 IRX5P78411 483 aaPredicted RBP13.4□□□□□ -0.26
APOBEC3F-202ENST00000381565 MICU3Q86XE3 530 aa13.4□□□□□ -0.26
APOBEC3F-202ENST00000381565 FBXO16Q8IX29 292 aaPredicted RBP13.4□□□□□ -0.26
APOBEC3F-202ENST00000381565 TMTC2Q8N394 836 aa13.4□□□□□ -0.26
APOBEC3F-202ENST00000381565 SRBD1Q8N5C6 995 aaKnown RBP13.4□□□□□ -0.26
APOBEC3F-202ENST00000381565 RGS22Q8NE09 1264 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms