RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 NAA15Q9BXJ9 866 aaKnown RBP13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 DISC1Q9NRI5 854 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 TMEM260Q9NX78 707 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 GOLGA6AQ9NYA3 693 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 KIF1AQ12756 1690 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 SHTN1A0MZ66 631 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 MARCH6O60337 910 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 HERVK_113P62684 666 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 APBA1Q02410 837 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 NEDD9Q14511 834 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 NAALADL2Q58DX5 795 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 NBPF5PQ86XG9 351 aaPredicted RBP13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 SH3RF3Q8TEJ3 882 aaPredicted RBP13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 FAXDC2Q96IV6 333 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 FRMPD2Q68DX3 1309 aaPredicted RBP13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 PDE2AO00408 941 aaPredicted RBP13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 NF2P35240 595 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 PFKFB3Q16875 520 aaPredicted RBP13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 ANKRD40Q6AI12 368 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 POTEDQ86YR6 584 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 CNOT6LQ96LI5 555 aaKnown RBP13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 IL17RBQ9NRM6 502 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 EXOC1Q9NV70 894 aa13.85□□□□□ -0.19
PRPF40B-202ENST00000380281 ADAMTS7Q9UKP4 1686 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 IRF6O14896 467 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 SKAP2O75563 359 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 RPS8P62241 208 aaKnown RBP13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 PIP4K2BP78356 416 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 TDRD12Q587J7 1177 aaKnown RBP13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 TBC1D9BQ66K14 1250 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 RCSD1Q6JBY9 416 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 WDR59Q6PJI9 974 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 CEP57Q86XR8 500 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 TNFRSF25Q93038 417 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 CCDC42Q96M95 316 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 CAPS2Q9BXY5 557 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 NHEJ1Q9H9Q4 299 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 VEZTQ9HBM0 779 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 LIMA1Q9UHB6 759 aaKnown RBP13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 TAF1P21675 1872 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 GLI3P10071 1580 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 AKR1B10O60218 316 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 MOCS3O95396 460 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 KIF5BP33176 963 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 CABP7Q86V35 215 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 GLIS3Q8NEA6 775 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 ODF2LQ9ULJ1 636 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 ATRNO75882 1429 aa13.84□□□□□ -0.19
PRPF40B-202ENST00000380281 COL18A1P39060 1754 aa13.83□□□□□ -0.19
PRPF40B-202ENST00000380281 CYTH3O43739 400 aa13.83□□□□□ -0.19
PRPF40B-202ENST00000380281 SPAG1Q07617 926 aa13.83□□□□□ -0.19
PRPF40B-202ENST00000380281 OTUD6BQ8N6M0 293 aa13.83□□□□□ -0.19
PRPF40B-202ENST00000380281 TCP11L1Q9NUJ3 509 aa13.83□□□□□ -0.19
PRPF40B-202ENST00000380281 TNS2Q63HR2 1409 aa13.83□□□□□ -0.19
PRPF40B-202ENST00000380281 ALS2Q96Q42 1657 aa13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 KLRF2D3W0D1 207 aa13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 EPHB6O15197 1021 aa13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 CALM1P0DP23 149 aa13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 CALM2P0DP24 149 aa13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 CALM3P0DP25 149 aa13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 AARSP49588 968 aaKnown RBP eCLIP13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 PICALMQ13492 652 aa13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 ADSSL1Q8N142 457 aa13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 COA7Q96BR5 231 aa13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 MCM8Q9UJA3 840 aa13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 ESYT3A0FGR9 886 aa13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 AGPSO00116 658 aa13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 BMP15O95972 392 aa13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 SLC35G1Q2M3R5 365 aa13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 KCTD16Q68DU8 428 aa13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 SND1Q7KZF4 910 aaKnown RBP eCLIP13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 RRAGAQ7L523 313 aa13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 RMND1Q9NWS8 449 aa13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 ZC3H4Q9UPT8 1303 aaKnown RBP13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 MYH7P12883 1935 aa13.83□□□□□ -0.2
PRPF40B-202ENST00000380281 POTEMA6NI47 508 aa13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 SHOX2O60902 331 aaPredicted RBP13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 SPA17Q15506 151 aa13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 PARP10Q53GL7 1025 aa13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 MARCH10Q8NA82 808 aaPredicted RBP13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 COG1Q8WTW3 980 aa13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 PCDHA4Q9UN74 947 aa13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 COL1A1P02452 1464 aaPredicted RBP13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 BCL9O00512 1426 aa13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 SMCO2A6NFE2 343 aa13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 H7C1D1 291 aa13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 NDUFAB1O14561 156 aa13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 KRT86O43790 486 aa13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 KIAA0754O94854 1291 aa13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 KIF5AQ12840 1032 aa13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 SF3A3Q12874 501 aaKnown RBP eCLIP13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 NFRKBQ6P4R8 1299 aa13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 NELFCDQ8IXH7 590 aa13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 CDK5RAP3Q96JB5 506 aa13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 PCDHA6Q9UN73 950 aa13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 PCDHA8Q9Y5H6 950 aa13.82□□□□□ -0.2
PRPF40B-202ENST00000380281 LGALS16A8MUM7 142 aa13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 C21orf2O43822 256 aa13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 FNTAP49354 379 aa13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 WHAMMP3Q1A5X7 153 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms