RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 RTL9Q8NET4 1388 aa13.46□□□□□ -0.25
HERC6-203ENST00000380265 TSPOAP1O95153 1857 aa13.46□□□□□ -0.25
HERC6-203ENST00000380265 SMIM22K7EJ46 135 aa13.46□□□□□ -0.25
HERC6-203ENST00000380265 CTNNA1P35221 906 aaKnown RBP13.46□□□□□ -0.25
HERC6-203ENST00000380265 GFPT1Q06210 699 aaPredicted RBP13.46□□□□□ -0.25
HERC6-203ENST00000380265 TRADDQ15628 312 aa13.46□□□□□ -0.25
HERC6-203ENST00000380265 PREPLQ4J6C6 727 aaPredicted RBP13.46□□□□□ -0.25
HERC6-203ENST00000380265 CACNA2D3Q8IZS8 1091 aa13.46□□□□□ -0.25
HERC6-203ENST00000380265 MIEF2Q96C03 454 aa13.46□□□□□ -0.25
HERC6-203ENST00000380265 CYP2D7A0A087X1C5 515 aa13.46□□□□□ -0.25
HERC6-203ENST00000380265 EHHADHQ08426 723 aa13.46□□□□□ -0.25
HERC6-203ENST00000380265 PPP1R7Q15435 360 aa13.46□□□□□ -0.25
HERC6-203ENST00000380265 KRT28Q7Z3Y7 464 aa13.46□□□□□ -0.25
HERC6-203ENST00000380265 PNMA8AQ86V59 439 aaPredicted RBP13.46□□□□□ -0.25
HERC6-203ENST00000380265 RETREG2Q8NC44 543 aa13.46□□□□□ -0.25
HERC6-203ENST00000380265 CABLES1Q8TDN4 633 aa13.46□□□□□ -0.25
HERC6-203ENST00000380265 SHISA4Q96DD7 197 aa13.46□□□□□ -0.25
HERC6-203ENST00000380265 CCDC194A0A1B0GVG4 234 aa13.46□□□□□ -0.26
HERC6-203ENST00000380265 CYP7A1P22680 504 aa13.46□□□□□ -0.26
HERC6-203ENST00000380265 PKN1Q16512 942 aa13.46□□□□□ -0.26
HERC6-203ENST00000380265 CAVIN3Q969G5 261 aa13.46□□□□□ -0.26
HERC6-203ENST00000380265 MCM8Q9UJA3 840 aa13.46□□□□□ -0.26
HERC6-203ENST00000380265 BICDL2A1A5D9 508 aa13.45□□□□□ -0.26
HERC6-203ENST00000380265 HMGB1P1B2RPK0 211 aaPredicted RBP13.45□□□□□ -0.26
HERC6-203ENST00000380265 SKAP2O75563 359 aaPredicted RBP13.45□□□□□ -0.26
HERC6-203ENST00000380265 HPS3Q969F9 1004 aa13.45□□□□□ -0.26
HERC6-203ENST00000380265 DISC1Q9NRI5 854 aa13.45□□□□□ -0.26
HERC6-203ENST00000380265 ARHGAP20Q9P2F6 1191 aa13.45□□□□□ -0.26
HERC6-203ENST00000380265 GMNCA6NCL1 334 aa13.45□□□□□ -0.26
HERC6-203ENST00000380265 PDE6BP35913 854 aa13.45□□□□□ -0.26
HERC6-203ENST00000380265 IFFO1Q0D2I5 559 aa13.45□□□□□ -0.26
HERC6-203ENST00000380265 STAG1Q8WVM7 1258 aa13.45□□□□□ -0.26
HERC6-203ENST00000380265 P2RX5Q93086 422 aa13.45□□□□□ -0.26
HERC6-203ENST00000380265 TRMT112Q9UI30 125 aaKnown RBP13.45□□□□□ -0.26
HERC6-203ENST00000380265 BUB1BO60566 1050 aaPredicted RBP13.45□□□□□ -0.26
HERC6-203ENST00000380265 PDE8BO95263 885 aa13.45□□□□□ -0.26
HERC6-203ENST00000380265 ANKRD40Q6AI12 368 aa13.45□□□□□ -0.26
HERC6-203ENST00000380265 HIBCHQ6NVY1 386 aaPredicted RBP13.45□□□□□ -0.26
HERC6-203ENST00000380265 RGPD2P0DJD1 1756 aa13.45□□□□□ -0.26
HERC6-203ENST00000380265 LRRC53A6NM62 1247 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 OPLAHO14841 1288 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 PRPF3O43395 683 aaKnown RBP13.44□□□□□ -0.26
HERC6-203ENST00000380265 GCFC2P16383 781 aaKnown RBP13.44□□□□□ -0.26
HERC6-203ENST00000380265 SLC1A4P43007 532 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 ALX1Q15699 326 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 CASKIN2Q8WXE0 1202 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 ACTR5Q9H9F9 607 aaPredicted RBP13.44□□□□□ -0.26
HERC6-203ENST00000380265 LTN1O94822 1766 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 PCCAP05165 728 aaPredicted RBP13.44□□□□□ -0.26
HERC6-203ENST00000380265 PEX19P40855 299 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 IL17AQ16552 155 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 IQCKQ8N0W5 287 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 ENAHQ8N8S7 591 aaPredicted RBP13.44□□□□□ -0.26
HERC6-203ENST00000380265 TCP11Q8WWU5 503 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 GPKOWQ92917 476 aaPredicted RBP eCLIP13.44□□□□□ -0.26
HERC6-203ENST00000380265 SLC39A2Q9NP94 309 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 A1CFQ9NQ94 594 aaKnown RBP13.44□□□□□ -0.26
HERC6-203ENST00000380265 DDX20Q9UHI6 824 aaKnown RBP13.44□□□□□ -0.26
HERC6-203ENST00000380265 TPX2Q9ULW0 747 aaKnown RBP13.44□□□□□ -0.26
HERC6-203ENST00000380265 NOVA2Q9UNW9 492 aaKnown RBP13.44□□□□□ -0.26
HERC6-203ENST00000380265 CLTAP09496 248 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 SLC5A1P13866 664 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 TNNC1P63316 161 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 RASGRF1Q13972 1273 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 CCDC50Q8IVM0 306 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 MTMR8Q96EF0 704 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 ZSCAN10Q96SZ4 725 aaPredicted RBP13.44□□□□□ -0.26
HERC6-203ENST00000380265 TLR10Q9BXR5 811 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 TRIM6Q9C030 488 aaPredicted RBP13.44□□□□□ -0.26
HERC6-203ENST00000380265 FBXO3Q9UK99 471 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 NWD2Q9ULI1 1742 aa13.44□□□□□ -0.26
HERC6-203ENST00000380265 SMIM23A6NLE4 172 aa13.43□□□□□ -0.26
HERC6-203ENST00000380265 PALMO75781 387 aa13.43□□□□□ -0.26
HERC6-203ENST00000380265 FCER1AP12319 257 aa13.43□□□□□ -0.26
HERC6-203ENST00000380265 HSPA2P54652 639 aa13.43□□□□□ -0.26
HERC6-203ENST00000380265 TTI2Q6NXR4 508 aa13.43□□□□□ -0.26
HERC6-203ENST00000380265 FUKQ8N0W3 1084 aa13.43□□□□□ -0.26
HERC6-203ENST00000380265 SGSM3Q96HU1 749 aa13.43□□□□□ -0.26
HERC6-203ENST00000380265 RSRC1Q96IZ7 334 aaKnown RBP13.43□□□□□ -0.26
HERC6-203ENST00000380265 PHF20L1A8MW92 1017 aa13.43□□□□□ -0.26
HERC6-203ENST00000380265 TMCO5BA8MYB1 307 aa13.43□□□□□ -0.26
HERC6-203ENST00000380265 CCNE1P24864 410 aa13.43□□□□□ -0.26
HERC6-203ENST00000380265 LONP1P36776 959 aaKnown RBP13.43□□□□□ -0.26
HERC6-203ENST00000380265 KRT71Q3SY84 523 aa13.43□□□□□ -0.26
HERC6-203ENST00000380265 GKAP1Q5VSY0 366 aaPredicted RBP13.43□□□□□ -0.26
HERC6-203ENST00000380265 DDX42Q86XP3 938 aaKnown RBP eCLIP13.43□□□□□ -0.26
HERC6-203ENST00000380265 TEX11Q8IYF3 940 aa13.43□□□□□ -0.26
HERC6-203ENST00000380265 LUC7LQ9NQ29 371 aaKnown RBP13.43□□□□□ -0.26
HERC6-203ENST00000380265 TCRBV5S4A2TA0A5A2 114 aa13.43□□□□□ -0.26
HERC6-203ENST00000380265 IRS4O14654 1257 aaPredicted RBP13.43□□□□□ -0.26
HERC6-203ENST00000380265 EPHB6O15197 1021 aa13.43□□□□□ -0.26
HERC6-203ENST00000380265 SATB1Q01826 763 aa13.43□□□□□ -0.26
HERC6-203ENST00000380265 NAIF1Q69YI7 327 aaPredicted RBP13.43□□□□□ -0.26
HERC6-203ENST00000380265 YTHDF3Q7Z739 585 aaKnown RBP13.43□□□□□ -0.26
HERC6-203ENST00000380265 TRIM31Q9BZY9 425 aa13.43□□□□□ -0.26
HERC6-203ENST00000380265 SALL4Q9UJQ4 1053 aa13.43□□□□□ -0.26
HERC6-203ENST00000380265 AFDNP55196 1824 aaKnown RBP13.42□□□□□ -0.26
HERC6-203ENST00000380265 KCNK3O14649 394 aa13.42□□□□□ -0.26
HERC6-203ENST00000380265 RASSF9O75901 435 aa13.42□□□□□ -0.26
HERC6-203ENST00000380265 GNAT2P19087 354 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms