RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 GTF3C6Q969F1 213 aa14.24□□□□□ -0.13
VRK3-202ENST00000377011 NEK1Q96PY6 1258 aa14.24□□□□□ -0.13
VRK3-202ENST00000377011 MMP19Q99542 508 aa14.24□□□□□ -0.13
VRK3-202ENST00000377011 DDX19AQ9NUU7 478 aaKnown RBP14.24□□□□□ -0.13
VRK3-202ENST00000377011 USP25Q9UHP3 1055 aa14.24□□□□□ -0.13
VRK3-202ENST00000377011 IVNS1ABPQ9Y6Y0 642 aa14.24□□□□□ -0.13
VRK3-202ENST00000377011 ASTN1O14525 1302 aa14.23□□□□□ -0.13
VRK3-202ENST00000377011 PLA2G6O60733 806 aa14.23□□□□□ -0.13
VRK3-202ENST00000377011 SLC25A27O95847 323 aa14.23□□□□□ -0.13
VRK3-202ENST00000377011 ZNF792Q3KQV3 632 aa14.23□□□□□ -0.13
VRK3-202ENST00000377011 SYDE2Q5VT97 1194 aa14.23□□□□□ -0.13
VRK3-202ENST00000377011 ANO1Q5XXA6 986 aa14.23□□□□□ -0.13
VRK3-202ENST00000377011 SASS6Q6UVJ0 657 aa14.23□□□□□ -0.13
VRK3-202ENST00000377011 DPP9Q86TI2 863 aa14.23□□□□□ -0.13
VRK3-202ENST00000377011 IQCA1Q86XH1 822 aa14.23□□□□□ -0.13
VRK3-202ENST00000377011 IGDCC4Q8TDY8 1250 aa14.23□□□□□ -0.13
VRK3-202ENST00000377011 MAML3Q96JK9 1138 aa14.23□□□□□ -0.13
VRK3-202ENST00000377011 TCEANC2Q96MN5 208 aa14.23□□□□□ -0.13
VRK3-202ENST00000377011 RANBP17Q9H2T7 1088 aaKnown RBP14.23□□□□□ -0.13
VRK3-202ENST00000377011 ZSCAN16Q9H4T2 348 aaPredicted RBP14.23□□□□□ -0.13
VRK3-202ENST00000377011 R3HCC1Q9Y3T6 440 aaKnown RBP14.23□□□□□ -0.13
VRK3-202ENST00000377011 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.23□□□□□ -0.135e-6■■■■□ 19.3
VRK3-202ENST00000377011 FRMPD3Q5JV73 1810 aa14.23□□□□□ -0.13
VRK3-202ENST00000377011 ADCY5O95622 1261 aa14.22□□□□□ -0.13
VRK3-202ENST00000377011 FCER1AP12319 257 aa14.22□□□□□ -0.13
VRK3-202ENST00000377011 CNTN2Q02246 1040 aa14.22□□□□□ -0.13
VRK3-202ENST00000377011 LHX8Q68G74 356 aa14.22□□□□□ -0.13
VRK3-202ENST00000377011 UBE2Q1Q7Z7E8 422 aa14.22□□□□□ -0.13
VRK3-202ENST00000377011 FAM160B2Q86V87 743 aa14.22□□□□□ -0.13
VRK3-202ENST00000377011 RAB11FIP4Q86YS3 637 aa14.22□□□□□ -0.13
VRK3-202ENST00000377011 CHURC1Q8WUH1 139 aa14.22□□□□□ -0.13
VRK3-202ENST00000377011 PIBF1Q8WXW3 757 aa14.22□□□□□ -0.13
VRK3-202ENST00000377011 MYL10Q9BUA6 226 aa14.22□□□□□ -0.13
VRK3-202ENST00000377011 KAT14Q9H8E8 782 aa14.22□□□□□ -0.13
VRK3-202ENST00000377011 CNNM2Q9H8M5 875 aa14.22□□□□□ -0.13
VRK3-202ENST00000377011 DNAJC25-GNG10A0A024R161 153 aa14.21□□□□□ -0.13
VRK3-202ENST00000377011 STRNO43815 780 aa14.21□□□□□ -0.13
VRK3-202ENST00000377011 SGPL1O95470 568 aa14.21□□□□□ -0.13
VRK3-202ENST00000377011 CAVIN2O95810 425 aa14.21□□□□□ -0.13
VRK3-202ENST00000377011 ALAS1P13196 640 aa14.21□□□□□ -0.13
VRK3-202ENST00000377011 IFIT1BQ5T764 474 aaKnown RBP14.21□□□□□ -0.13
VRK3-202ENST00000377011 RBM43Q6ZSC3 357 aaKnown RBP14.21□□□□□ -0.13
VRK3-202ENST00000377011 NCOA7Q8NI08 942 aa14.21□□□□□ -0.13
VRK3-202ENST00000377011 UBAC1Q9BSL1 405 aa14.21□□□□□ -0.13
VRK3-202ENST00000377011 CRISPLD2Q9H0B8 497 aa14.21□□□□□ -0.13
VRK3-202ENST00000377011 NUP62CLQ9H1M0 184 aa14.21□□□□□ -0.13
VRK3-202ENST00000377011 RNF146Q9NTX7 359 aa14.21□□□□□ -0.13
VRK3-202ENST00000377011 KIF3AQ9Y496 699 aa14.21□□□□□ -0.13
VRK3-202ENST00000377011 RPTORQ8N122 1335 aa14.21□□□□□ -0.13
VRK3-202ENST00000377011 IFIT3O14879 490 aaKnown RBP14.21□□□□□ -0.14
VRK3-202ENST00000377011 PTGS1P23219 599 aa14.21□□□□□ -0.14
VRK3-202ENST00000377011 ABRAQ8N0Z2 381 aa14.21□□□□□ -0.14
VRK3-202ENST00000377011 FAM200AQ8TCP9 573 aa14.21□□□□□ -0.14
VRK3-202ENST00000377011 LENG1Q96BZ8 264 aaPredicted RBP14.21□□□□□ -0.14
VRK3-202ENST00000377011 LY9Q9HBG7 655 aa14.21□□□□□ -0.14
VRK3-202ENST00000377011 A1CFQ9NQ94 594 aaKnown RBP14.21□□□□□ -0.14
VRK3-202ENST00000377011 MAD2L2Q9UI95 211 aa14.21□□□□□ -0.14
VRK3-202ENST00000377011 ALPK3Q96L96 1907 aa14.2□□□□□ -0.14
VRK3-202ENST00000377011 GOLGA6L6A8MZA4 724 aa14.2□□□□□ -0.14
VRK3-202ENST00000377011 NFIBO00712 420 aa14.2□□□□□ -0.14
VRK3-202ENST00000377011 CYBAP13498 195 aa14.2□□□□□ -0.14
VRK3-202ENST00000377011 RXRAP19793 462 aa14.2□□□□□ -0.14
VRK3-202ENST00000377011 PPP4R3BQ5MIZ7 849 aa14.2□□□□□ -0.14
VRK3-202ENST00000377011 ATL3Q6DD88 541 aa14.2□□□□□ -0.14
VRK3-202ENST00000377011 ADGRF4Q8IZF3 695 aa14.2□□□□□ -0.14
VRK3-202ENST00000377011 SMARCC2Q8TAQ2 1214 aa14.2□□□□□ -0.14
VRK3-202ENST00000377011 TBC1D5Q92609 795 aa14.2□□□□□ -0.14
VRK3-202ENST00000377011 TRERF1Q96PN7 1200 aa14.2□□□□□ -0.14
VRK3-202ENST00000377011 VAT1LQ9HCJ6 419 aa14.2□□□□□ -0.14
VRK3-202ENST00000377011 HMX1Q9NP08 348 aaPredicted RBP14.2□□□□□ -0.14
VRK3-202ENST00000377011 SOWAHBA6NEL2 793 aa14.19□□□□□ -0.14
VRK3-202ENST00000377011 PRC1O43663 620 aa14.19□□□□□ -0.14
VRK3-202ENST00000377011 PFKFB2O60825 505 aa14.19□□□□□ -0.14
VRK3-202ENST00000377011 PPP1R11O60927 126 aaPredicted RBP14.19□□□□□ -0.14
VRK3-202ENST00000377011 OAZ1P54368 228 aa14.19□□□□□ -0.14
VRK3-202ENST00000377011 IRX5P78411 483 aaPredicted RBP14.19□□□□□ -0.14
VRK3-202ENST00000377011 HMGN5P82970 282 aaKnown RBP14.19□□□□□ -0.14
VRK3-202ENST00000377011 TROAPQ12815 778 aa14.19□□□□□ -0.14
VRK3-202ENST00000377011 TRDNQ13061 729 aa14.19□□□□□ -0.14
VRK3-202ENST00000377011 KCTD2Q14681 263 aa14.19□□□□□ -0.14
VRK3-202ENST00000377011 RALYLQ86SE5 291 aaKnown RBP14.19□□□□□ -0.14
VRK3-202ENST00000377011 CLEC4DQ8WXI8 215 aa14.19□□□□□ -0.14
VRK3-202ENST00000377011 SPATA32Q96LK8 384 aa14.19□□□□□ -0.14
VRK3-202ENST00000377011 AGXT2Q9BYV1 514 aa14.19□□□□□ -0.14
VRK3-202ENST00000377011 SPTLC3Q9NUV7 552 aa14.19□□□□□ -0.14
VRK3-202ENST00000377011 CCPG1Q9ULG6 757 aa14.19□□□□□ -0.14
VRK3-202ENST00000377011 GOLGA6L4A6NEF3 574 aa14.18□□□□□ -0.14
VRK3-202ENST00000377011 ADCY6O43306 1168 aa14.18□□□□□ -0.14
VRK3-202ENST00000377011 CYTH3O43739 400 aa14.18□□□□□ -0.14
VRK3-202ENST00000377011 SNAI1O95863 264 aaPredicted RBP14.18□□□□□ -0.14
VRK3-202ENST00000377011 TFRCP02786 760 aaKnown RBP14.18□□□□□ -0.14
VRK3-202ENST00000377011 ICAM1P05362 532 aa14.18□□□□□ -0.14
VRK3-202ENST00000377011 RESTQ13127 1097 aa14.18□□□□□ -0.14
VRK3-202ENST00000377011 TMEM67Q5HYA8 995 aa14.18□□□□□ -0.14
VRK3-202ENST00000377011 TMEM63BQ5T3F8 832 aa14.18□□□□□ -0.14
VRK3-202ENST00000377011 OLFML2BQ68BL8 750 aa14.18□□□□□ -0.14
VRK3-202ENST00000377011 FBXL16Q8N461 479 aa14.18□□□□□ -0.14
VRK3-202ENST00000377011 LEO1Q8WVC0 666 aaPredicted RBP14.18□□□□□ -0.14
VRK3-202ENST00000377011 PRIMPOLQ96LW4 560 aa14.18□□□□□ -0.14
VRK3-202ENST00000377011 JMJD4Q9H9V9 463 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms