RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 PLEKP08567 350 aaPredicted RBP15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 SRGNP10124 158 aa15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 DNM2P50570 870 aa15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 CRY2Q49AN0 593 aa15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 ARL6IP4Q66PJ3 421 aaKnown RBP15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 BLIDQ8IZY5 108 aa15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 CSGALNACT2Q8N6G5 542 aa15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 RPGRQ92834 1020 aaKnown RBP15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 DRC1Q96MC2 740 aa15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 GPR101Q96P66 508 aaPredicted RBP15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 TTYH3Q9C0H2 523 aa15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 THAP9Q9H5L6 903 aa15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 EXOC1Q9NV70 894 aa15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 DUOX1Q9NRD9 1551 aa15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 PSMA7O14818 248 aa15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 ZNF263O14978 683 aa15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 MCM3P25205 808 aa15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 CYLC1P35663 651 aaPredicted RBP15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 CORO7P57737 925 aa15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 CKAP4Q07065 602 aaKnown RBP15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 TYW1BQ6NUM6 668 aa15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 DTHD1Q6ZMT9 781 aa15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 BRIP1Q9BX63 1249 aa15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 EHD4Q9H223 541 aa15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 ZNHIT6Q9NWK9 470 aaKnown RBP15.76■□□□□ 0.11
CLCNKA-202ENST00000375692 COL1A1P02452 1464 aaPredicted RBP15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 FGRP09769 529 aa15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 BAG6P46379 1132 aa15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 GRAPQ13588 217 aa15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 FLAD1Q8NFF5 587 aa15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 GRAPLQ8TC17 118 aaPredicted RBP15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 STK32BQ9NY57 414 aa15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 LRWD1Q9UFC0 647 aa15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 UBA7P41226 1012 aa15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 MATR3P43243 847 aaKnown RBP eCLIP15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 ANKRD40Q6AI12 368 aa15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 STAG2Q8N3U4 1231 aa15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 GIMAP8Q8ND71 665 aaPredicted RBP15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 IPO4Q8TEX9 1081 aaKnown RBP15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 RRP36Q96EU6 259 aaKnown RBP15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 PSMB7Q99436 277 aa15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 KAT14Q9H8E8 782 aa15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 SMARCAL1Q9NZC9 954 aa15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 MTMR7Q9Y216 660 aa15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.75■□□□□ 0.11
CLCNKA-202ENST00000375692 IPO7O95373 1038 aaKnown RBP15.74■□□□□ 0.11
CLCNKA-202ENST00000375692 CERS3Q8IU89 383 aa15.74■□□□□ 0.11
CLCNKA-202ENST00000375692 EHBP1Q8NDI1 1231 aa15.74■□□□□ 0.11
CLCNKA-202ENST00000375692 HPS3Q969F9 1004 aa15.74■□□□□ 0.11
CLCNKA-202ENST00000375692 FAM84BQ96KN1 310 aaPredicted RBP15.74■□□□□ 0.11
CLCNKA-202ENST00000375692 LRRC1Q9BTT6 524 aa15.74■□□□□ 0.11
CLCNKA-202ENST00000375692 EFCC1Q9HA90 598 aa15.74■□□□□ 0.11
CLCNKA-202ENST00000375692 DMGDHQ9UI17 866 aaKnown RBP15.74■□□□□ 0.11
CLCNKA-202ENST00000375692 RHOBTB3O94955 611 aa15.74■□□□□ 0.11
CLCNKA-202ENST00000375692 SLC7A5Q01650 507 aa15.74■□□□□ 0.11
CLCNKA-202ENST00000375692 KCNB1Q14721 858 aa15.74■□□□□ 0.11
CLCNKA-202ENST00000375692 INF2Q27J81 1249 aa15.74■□□□□ 0.11
CLCNKA-202ENST00000375692 TTC31Q49AM3 519 aaPredicted RBP15.74■□□□□ 0.11
CLCNKA-202ENST00000375692 RPGRIP1Q96KN7 1286 aa15.74■□□□□ 0.11
CLCNKA-202ENST00000375692 CNOT6LQ96LI5 555 aaKnown RBP15.74■□□□□ 0.11
CLCNKA-202ENST00000375692 MLXIPQ9HAP2 919 aa15.74■□□□□ 0.11
CLCNKA-202ENST00000375692 ANKIB1Q9P2G1 1089 aa15.74■□□□□ 0.11
CLCNKA-202ENST00000375692 GOLGA6BA6NDN3 693 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 MTIF2P46199 727 aaKnown RBP15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 ZBED6P86452 979 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 KIF5AQ12840 1032 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 STK4Q13043 487 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 CCDC96Q2M329 555 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 FKBP15Q5T1M5 1219 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 RCSD1Q6JBY9 416 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 SND1Q7KZF4 910 aaKnown RBP eCLIP15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 CREG2Q8IUH2 290 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 SECISBP2LQ93073 1101 aaKnown RBP15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 KBTBD4Q9NVX7 518 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 EHD2Q9NZN4 543 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 CAPN6Q9Y6Q1 641 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 ZNF804BA4D1E1 1349 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 GOLGA6CA6NDK9 693 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 TSPY2A6NKD2 308 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 GOLGA6DP0CG33 693 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 FCER1AP12319 257 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 HMGB2P26583 209 aaKnown RBP15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 CXCR5P32302 372 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 UBE4AQ14139 1066 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 CCDC178Q5BJE1 867 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 TTC19Q6DKK2 380 aaPredicted RBP15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 ZNF662Q6ZS27 426 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 FAM76AQ8TAV0 307 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 GOLGA6AQ9NYA3 693 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 PCDHA4Q9UN74 947 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 JAG2Q9Y219 1238 aa15.73■□□□□ 0.11
CLCNKA-202ENST00000375692 CCDC194A0A1B0GVG4 234 aa15.72■□□□□ 0.11
CLCNKA-202ENST00000375692 DNAJC21Q5F1R6 531 aaKnown RBP15.72■□□□□ 0.11
CLCNKA-202ENST00000375692 MIIPQ5JXC2 388 aa15.72■□□□□ 0.11
CLCNKA-202ENST00000375692 CCDC170Q8IYT3 715 aa15.72■□□□□ 0.11
CLCNKA-202ENST00000375692 AENQ8WTP8 325 aaKnown RBP15.72■□□□□ 0.11
CLCNKA-202ENST00000375692 CCDC42Q96M95 316 aa15.72■□□□□ 0.11
CLCNKA-202ENST00000375692 PURBQ96QR8 312 aaKnown RBP15.72■□□□□ 0.11
CLCNKA-202ENST00000375692 NOC4LQ9BVI4 516 aaKnown RBP15.72■□□□□ 0.11
CLCNKA-202ENST00000375692 DCP1AQ9NPI6 582 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms