RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 PNMA3Q9UL41 463 aa20.12■□□□□ 0.81
PFDN6-201ENST00000374606 KCNJ14Q9UNX9 436 aa20.12■□□□□ 0.81
PFDN6-201ENST00000374606 SPDYE16A6NNV3 312 aaPredicted RBP20.11■□□□□ 0.81
PFDN6-201ENST00000374606 VWA5AO00534 786 aa20.11■□□□□ 0.81
PFDN6-201ENST00000374606 SOX1O00570 391 aaPredicted RBP20.11■□□□□ 0.81
PFDN6-201ENST00000374606 TNPO2O14787 897 aaKnown RBP20.11■□□□□ 0.81
PFDN6-201ENST00000374606 CALML3P27482 149 aa20.11■□□□□ 0.81
PFDN6-201ENST00000374606 IRF5Q13568 498 aa20.11■□□□□ 0.81
PFDN6-201ENST00000374606 USH1GQ495M9 461 aa20.11■□□□□ 0.81
PFDN6-201ENST00000374606 MCTP1Q6DN14 999 aa20.11■□□□□ 0.81
PFDN6-201ENST00000374606 TYW1BQ6NUM6 668 aa20.11■□□□□ 0.81
PFDN6-201ENST00000374606 COA7Q96BR5 231 aa20.11■□□□□ 0.81
PFDN6-201ENST00000374606 DEFB118Q96PH6 123 aa20.11■□□□□ 0.81
PFDN6-201ENST00000374606 ASCC2Q9H1I8 757 aaPredicted RBP20.11■□□□□ 0.81
PFDN6-201ENST00000374606 BRMS1Q9HCU9 246 aa20.11■□□□□ 0.81
PFDN6-201ENST00000374606 HOXC10Q9NYD6 342 aa20.11■□□□□ 0.81
PFDN6-201ENST00000374606 PNMA2Q9UL42 364 aa20.11■□□□□ 0.81
PFDN6-201ENST00000374606 SLC45A1Q9Y2W3 748 aa20.11■□□□□ 0.81
PFDN6-201ENST00000374606 PCDHA1Q9Y5I3 950 aa20.11■□□□□ 0.81
PFDN6-201ENST00000374606 ESYT2A0FGR8 921 aa20.1■□□□□ 0.81
PFDN6-201ENST00000374606 F13A1P00488 732 aa20.1■□□□□ 0.81
PFDN6-201ENST00000374606 ICAM1P05362 532 aa20.1■□□□□ 0.81
PFDN6-201ENST00000374606 GNL2Q13823 731 aaKnown RBP20.1■□□□□ 0.81
PFDN6-201ENST00000374606 SMCR8Q8TEV9 937 aaPredicted RBP20.1■□□□□ 0.81
PFDN6-201ENST00000374606 ADAMTS5Q9UNA0 930 aa20.1■□□□□ 0.81
PFDN6-201ENST00000374606 ZDHHC9Q9Y397 364 aa20.1■□□□□ 0.81
PFDN6-201ENST00000374606 KRT2P35908 639 aa20.09■□□□□ 0.81
PFDN6-201ENST00000374606 GALNT17Q6IS24 598 aa20.09■□□□□ 0.81
PFDN6-201ENST00000374606 FERMT3Q86UX7 667 aa20.09■□□□□ 0.81
PFDN6-201ENST00000374606 DIS3L2Q8IYB7 885 aaKnown RBP20.09■□□□□ 0.81
PFDN6-201ENST00000374606 LRCH3Q96II8 777 aa20.09■□□□□ 0.81
PFDN6-201ENST00000374606 C6orf50Q9HD87 102 aa20.09■□□□□ 0.81
PFDN6-201ENST00000374606 PAK6Q9NQU5 681 aaPredicted RBP20.09■□□□□ 0.81
PFDN6-201ENST00000374606 CCPG1Q9ULG6 757 aa20.09■□□□□ 0.81
PFDN6-201ENST00000374606 ZNF536O15090 1300 aa20.08■□□□□ 0.81
PFDN6-201ENST00000374606 ABCB11O95342 1321 aa20.08■□□□□ 0.81
PFDN6-201ENST00000374606 ALPK3Q96L96 1907 aa20.08■□□□□ 0.81
PFDN6-201ENST00000374606 LAMA3Q16787 3333 aa20.08■□□□□ 0.81
PFDN6-201ENST00000374606 GNA11P29992 359 aa20.08■□□□□ 0.81
PFDN6-201ENST00000374606 ADCY7P51828 1080 aa20.08■□□□□ 0.81
PFDN6-201ENST00000374606 OAZ1P54368 228 aa20.08■□□□□ 0.81
PFDN6-201ENST00000374606 HERVK_113P62684 666 aa20.08■□□□□ 0.81
PFDN6-201ENST00000374606 CPXCR1Q8N123 301 aa20.08■□□□□ 0.81
PFDN6-201ENST00000374606 MB21D1Q8N884 522 aa20.08■□□□□ 0.81
PFDN6-201ENST00000374606 REPS2Q8NFH8 660 aa20.08■□□□□ 0.81
PFDN6-201ENST00000374606 CRISPLD2Q9H0B8 497 aa20.08■□□□□ 0.81
PFDN6-201ENST00000374606 ZMYND12Q9H0C1 365 aa20.08■□□□□ 0.81
PFDN6-201ENST00000374606 RAVER2Q9HCJ3 691 aaKnown RBP20.08■□□□□ 0.81
PFDN6-201ENST00000374606 CUL9Q8IWT3 2517 aa20.08■□□□□ 0.8
PFDN6-201ENST00000374606 MYH15Q9Y2K3 1946 aa20.08■□□□□ 0.8
PFDN6-201ENST00000374606 SMCO2A6NFE2 343 aa20.07■□□□□ 0.8
PFDN6-201ENST00000374606 TAL1P17542 331 aaPredicted RBP20.07■□□□□ 0.8
PFDN6-201ENST00000374606 RESTQ13127 1097 aa20.07■□□□□ 0.8
PFDN6-201ENST00000374606 LBX2Q6XYB7 198 aa20.07■□□□□ 0.8
PFDN6-201ENST00000374606 DAGLBQ8NCG7 672 aa20.07■□□□□ 0.8
PFDN6-201ENST00000374606 BICD2Q8TD16 824 aa20.07■□□□□ 0.8
PFDN6-201ENST00000374606 GTF3C2Q8WUA4 911 aaPredicted RBP20.07■□□□□ 0.8
PFDN6-201ENST00000374606 PAWRQ96IZ0 340 aaKnown RBP20.07■□□□□ 0.8
PFDN6-201ENST00000374606 AGBL1Q96MI9 1066 aa20.07■□□□□ 0.8
PFDN6-201ENST00000374606 P2RX7Q99572 595 aaKnown RBP20.07■□□□□ 0.8
PFDN6-201ENST00000374606 ZSCAN16Q9H4T2 348 aaPredicted RBP20.07■□□□□ 0.8
PFDN6-201ENST00000374606 PCDHA4Q9UN74 947 aa20.07■□□□□ 0.8
PFDN6-201ENST00000374606 NPY5RQ15761 445 aa20.06■□□□□ 0.8
PFDN6-201ENST00000374606 NECAB2Q7Z6G3 386 aa20.06■□□□□ 0.8
PFDN6-201ENST00000374606 BLIDQ8IZY5 108 aa20.06■□□□□ 0.8
PFDN6-201ENST00000374606 CUL5Q93034 780 aa20.06■□□□□ 0.8
PFDN6-201ENST00000374606 TEX13BQ9BXU2 312 aa20.06■□□□□ 0.8
PFDN6-201ENST00000374606 GLT8D2Q9H1C3 349 aa20.06■□□□□ 0.8
PFDN6-201ENST00000374606 FOXP1Q9H334 677 aaPredicted RBP20.06■□□□□ 0.8
PFDN6-201ENST00000374606 ZNF214Q9UL59 606 aaPredicted RBP20.06■□□□□ 0.8
PFDN6-201ENST00000374606 MRPL11Q9Y3B7 192 aaKnown RBP20.06■□□□□ 0.8
PFDN6-201ENST00000374606 ATP6V1DQ9Y5K8 247 aa20.06■□□□□ 0.8
PFDN6-201ENST00000374606 COL6A3P12111 3177 aa20.06■□□□□ 0.8
PFDN6-201ENST00000374606 DOCK3Q8IZD9 2030 aa20.05■□□□□ 0.8
PFDN6-201ENST00000374606 BTBD18B2RXH4 712 aa20.05■□□□□ 0.8
PFDN6-201ENST00000374606 KIF28PB7ZC32 967 aa20.05■□□□□ 0.8
PFDN6-201ENST00000374606 ATP2A1O14983 1001 aa20.05■□□□□ 0.8
PFDN6-201ENST00000374606 ALAS1P13196 640 aa20.05■□□□□ 0.8
PFDN6-201ENST00000374606 TMEM132BQ14DG7 1078 aa20.05■□□□□ 0.8
PFDN6-201ENST00000374606 SNRNP48Q6IEG0 339 aaKnown RBP20.05■□□□□ 0.8
PFDN6-201ENST00000374606 BRAPQ7Z569 592 aa20.05■□□□□ 0.8
PFDN6-201ENST00000374606 OXER1Q8TDS5 423 aa20.05■□□□□ 0.8
PFDN6-201ENST00000374606 PAGR1Q9BTK6 254 aa20.05■□□□□ 0.8
PFDN6-201ENST00000374606 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.05■□□□□ 0.8
PFDN6-201ENST00000374606 RIC8AQ9NPQ8 531 aa20.05■□□□□ 0.8
PFDN6-201ENST00000374606 U2AF2P26368 475 aaKnown RBP eCLIP20.04■□□□□ 0.82e-8■■□□□ 12.2
PFDN6-201ENST00000374606 BMP8BP34820 402 aa20.04■□□□□ 0.8
PFDN6-201ENST00000374606 MNX1P50219 401 aaPredicted RBP20.04■□□□□ 0.8
PFDN6-201ENST00000374606 MRPL12P52815 198 aaKnown RBP20.04■□□□□ 0.8
PFDN6-201ENST00000374606 NR5A1Q13285 461 aa20.04■□□□□ 0.8
PFDN6-201ENST00000374606 PLS1Q14651 629 aa20.04■□□□□ 0.8
PFDN6-201ENST00000374606 GPR153Q6NV75 609 aa20.04■□□□□ 0.8
PFDN6-201ENST00000374606 NOSTRINQ8IVI9 506 aa20.04■□□□□ 0.8
PFDN6-201ENST00000374606 REXO1Q8N1G1 1221 aaKnown RBP20.04■□□□□ 0.8
PFDN6-201ENST00000374606 TNPO1Q92973 898 aaKnown RBP20.04■□□□□ 0.8
PFDN6-201ENST00000374606 GDF15Q99988 308 aa20.04■□□□□ 0.8
PFDN6-201ENST00000374606 PSTPIP2Q9H939 334 aa20.04■□□□□ 0.8
PFDN6-201ENST00000374606 FAM110CQ1W6H9 321 aa20.03■□□□□ 0.8
PFDN6-201ENST00000374606 TKFCQ3LXA3 575 aa20.03■□□□□ 0.8
PFDN6-201ENST00000374606 ANKRD13CQ8N6S4 541 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms