RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 UBAP1Q9NZ09 502 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 PCDHB6Q9Y5E3 794 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 RASGRF2O14827 1237 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 CALCRLQ16602 461 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 RDH13Q8NBN7 331 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 KIFAP3Q92845 792 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 NCOA3Q9Y6Q9 1424 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 HNRNPCP07910 306 aaKnown RBP eCLIP13.85□□□□□ -0.19
GPC4-201ENST00000370828 ITGA6P23229 1130 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 CUL3Q13618 768 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 ZNF790Q6PG37 636 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 CCDC80Q76M96 950 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 RWDD2AQ9UIY3 292 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 SHANK2Q9UPX8 1470 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 PTCH1Q13635 1447 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 XRCC5P13010 732 aaKnown RBP13.85□□□□□ -0.19
GPC4-201ENST00000370828 GCFC2P16383 781 aaKnown RBP13.85□□□□□ -0.19
GPC4-201ENST00000370828 PCYT1AP49585 367 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 IRX4P78413 519 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 SLF2Q8IX21 1173 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 ZNF280CQ8ND82 737 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 ZNF473Q8WTR7 871 aaKnown RBP13.85□□□□□ -0.19
GPC4-201ENST00000370828 P3H4Q92791 437 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 CCT8L2Q96SF2 557 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 IMPG2Q9BZV3 1241 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 MLXIPQ9HAP2 919 aa13.85□□□□□ -0.19
GPC4-201ENST00000370828 PICALMQ13492 652 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 ZNF658Q5TYW1 1059 aaPredicted RBP13.84□□□□□ -0.19
GPC4-201ENST00000370828 NFRKBQ6P4R8 1299 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 KRT25Q7Z3Z0 450 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 PLBD2Q8NHP8 589 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 SMCR8Q8TEV9 937 aaPredicted RBP13.84□□□□□ -0.19
GPC4-201ENST00000370828 PAGE5Q96GU1 130 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 DYDC2Q96IM9 177 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 MMS19Q96T76 1030 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 DIAPH2O60879 1101 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 KCNJ6P48051 423 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 MB21D1Q8N884 522 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 SMC1BQ8NDV3 1235 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 ATP6V1G3Q96LB4 118 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 BATF3Q9NR55 127 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 LCMT1Q9UIC8 334 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 ZBTB21Q9ULJ3 1066 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 PASKQ96RG2 1323 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 GCNT3O95395 438 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 STMN1P16949 149 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 SEPT2Q15019 361 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 FAM43BQ6ZT52 329 aaPredicted RBP13.84□□□□□ -0.19
GPC4-201ENST00000370828 P2RX5Q93086 422 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 FOXP1Q9H334 677 aaPredicted RBP13.84□□□□□ -0.19
GPC4-201ENST00000370828 Q9H521 79 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 THEGQ9P2T0 379 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 MKL2Q9ULH7 1088 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 FAM47AQ5JRC9 791 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 ZMYND12Q9H0C1 365 aa13.84□□□□□ -0.19
GPC4-201ENST00000370828 ARMCX3Q9UH62 379 aaPredicted RBP13.84□□□□□ -0.19
GPC4-201ENST00000370828 URB2Q14146 1524 aaKnown RBP13.84□□□□□ -0.19
GPC4-201ENST00000370828 NCK2O43639 380 aa13.83□□□□□ -0.19
GPC4-201ENST00000370828 PPP2R2AP63151 447 aa13.83□□□□□ -0.19
GPC4-201ENST00000370828 ZMYM1Q5SVZ6 1142 aa13.83□□□□□ -0.19
GPC4-201ENST00000370828 BLIDQ8IZY5 108 aa13.83□□□□□ -0.19
GPC4-201ENST00000370828 PRPF38AQ8NAV1 312 aaKnown RBP13.83□□□□□ -0.19
GPC4-201ENST00000370828 CYTH2Q99418 400 aa13.83□□□□□ -0.19
GPC4-201ENST00000370828 MLXIPLQ9NP71 852 aa13.83□□□□□ -0.19
GPC4-201ENST00000370828 GPCPD1Q9NPB8 672 aa13.83□□□□□ -0.19
GPC4-201ENST00000370828 BSDC1Q9NW68 430 aaPredicted RBP13.83□□□□□ -0.19
GPC4-201ENST00000370828 HPCAL4Q9UM19 191 aa13.83□□□□□ -0.19
GPC4-201ENST00000370828 GCC2Q8IWJ2 1684 aa13.83□□□□□ -0.19
GPC4-201ENST00000370828 H3BQF6 201 aa13.83□□□□□ -0.2
GPC4-201ENST00000370828 EXOC3O60645 756 aa13.83□□□□□ -0.2
GPC4-201ENST00000370828 ITIH3Q06033 890 aa13.83□□□□□ -0.2
GPC4-201ENST00000370828 RESP18Q5W5W9 173 aa13.83□□□□□ -0.2
GPC4-201ENST00000370828 CYP4F22Q6NT55 531 aa13.83□□□□□ -0.2
GPC4-201ENST00000370828 NBPF10Q6P3W6 841 aaKnown RBP13.83□□□□□ -0.2
GPC4-201ENST00000370828 ARHGEF18Q6ZSZ5 1173 aa13.83□□□□□ -0.2
GPC4-201ENST00000370828 NOA1Q8NC60 698 aaKnown RBP13.83□□□□□ -0.2
GPC4-201ENST00000370828 MPHOSPH6Q99547 160 aaKnown RBP13.83□□□□□ -0.2
GPC4-201ENST00000370828 C6orf229H3BNL8 230 aa13.83□□□□□ -0.2
GPC4-201ENST00000370828 CAND2O75155 1236 aa13.83□□□□□ -0.2
GPC4-201ENST00000370828 GNA14O95837 355 aa13.83□□□□□ -0.2
GPC4-201ENST00000370828 MAK16Q9BXY0 300 aaKnown RBP13.83□□□□□ -0.2
GPC4-201ENST00000370828 VIPAS39Q9H9C1 493 aa13.83□□□□□ -0.2
GPC4-201ENST00000370828 ETAA1Q9NY74 926 aa13.83□□□□□ -0.2
GPC4-201ENST00000370828 MAST3O60307 1309 aa13.83□□□□□ -0.2
GPC4-201ENST00000370828 PACS2Q86VP3 889 aa13.83□□□□□ -0.2
GPC4-201ENST00000370828 LCA5Q86VQ0 697 aa13.83□□□□□ -0.2
GPC4-201ENST00000370828 KIRREL3Q8IZU9 778 aa13.83□□□□□ -0.2
GPC4-201ENST00000370828 TAB3Q8N5C8 712 aaPredicted RBP13.83□□□□□ -0.2
GPC4-201ENST00000370828 EPN3Q9H201 632 aa13.83□□□□□ -0.2
GPC4-201ENST00000370828 GGT7Q9UJ14 662 aa13.83□□□□□ -0.2
GPC4-201ENST00000370828 TNKSO95271 1327 aa13.83□□□□□ -0.2
GPC4-201ENST00000370828 FOXN1O15353 648 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 BCRP11274 1271 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 GFAPP14136 432 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 ATF2P15336 505 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 SCP2P22307 547 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 SEC24CP53992 1094 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 EIF3BP55884 814 aaKnown RBP13.82□□□□□ -0.2
GPC4-201ENST00000370828 BIRC3Q13489 604 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 FAM47EQ6ZV65 393 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms