RNA–Protein interactions for RNA: ENST00000370214.8

ABCD3-202, Transcript of ATP binding cassette subfamily D member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD3, Length 3,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-202ENST00000370214 CAPN6Q9Y6Q1 641 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 ARFGEF2Q9Y6D5 1785 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 COL1A1P02452 1464 aaPredicted RBP8.19□□□□□ -1.1
ABCD3-202ENST00000370214 BCL9O00512 1426 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 KCPQ6ZWJ8 1503 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 SORBS3O60504 671 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 CALM1P0DP23 149 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 CALM2P0DP24 149 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 CALM3P0DP25 149 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 EIF4A3P38919 411 aaKnown RBP8.19□□□□□ -1.1
ABCD3-202ENST00000370214 ARHGAP25P42331 645 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 NOP2P46087 812 aaKnown RBP8.19□□□□□ -1.1
ABCD3-202ENST00000370214 HERVK_113P62684 666 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 GPS2Q13227 327 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 DCAF17Q5H9S7 520 aaPredicted RBP8.19□□□□□ -1.1
ABCD3-202ENST00000370214 TMTC1Q8IUR5 882 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 SH2D3CQ8N5H7 860 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 RABGGTAQ92696 567 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.19□□□□□ -1.1
ABCD3-202ENST00000370214 SAR1BQ9Y6B6 198 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 STK36Q9NRP7 1315 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 MYH2Q9UKX2 1941 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 ACTN1P12814 892 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 EPS15P42566 896 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 RAPGEF1Q13905 1077 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 E2F4Q16254 413 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 CDKAL1Q5VV42 579 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 WDR59Q6PJI9 974 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 LEKR1Q6ZMV7 388 aa8.19□□□□□ -1.1
ABCD3-202ENST00000370214 DMGDHQ9UI17 866 aaKnown RBP8.19□□□□□ -1.1
ABCD3-202ENST00000370214 NWD2Q9ULI1 1742 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 CLIC2O15247 247 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 GDF11O95390 407 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 HOXA13P31271 388 aaPredicted RBP8.18□□□□□ -1.1
ABCD3-202ENST00000370214 CYP2C19P33261 490 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 KIF5AQ12840 1032 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 CCDC84Q86UT8 332 aaPredicted RBP8.18□□□□□ -1.1
ABCD3-202ENST00000370214 CNBD1Q8NA66 436 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 UHMK1Q8TAS1 419 aaKnown RBP8.18□□□□□ -1.1
ABCD3-202ENST00000370214 LRRC1Q9BTT6 524 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 DBNDD1Q9H9R9 158 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 SMIM23A6NLE4 172 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 LRRC53A6NM62 1247 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 ERLIN1O75477 346 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 AKR1B1P15121 316 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 GGCXP38435 758 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 POLR2FP61218 127 aaKnown RBP8.18□□□□□ -1.1
ABCD3-202ENST00000370214 GPSM2P81274 684 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 PRPF4BQ13523 1007 aaKnown RBP8.18□□□□□ -1.1
ABCD3-202ENST00000370214 BEND6Q5SZJ8 279 aaPredicted RBP8.18□□□□□ -1.1
ABCD3-202ENST00000370214 C12orf60Q5U649 245 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 RSRC2Q7L4I2 434 aaKnown RBP8.18□□□□□ -1.1
ABCD3-202ENST00000370214 CEP112Q8N8E3 955 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 CALML4Q96GE6 196 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 PANX2Q96RD6 677 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 IFIH1Q9BYX4 1025 aaKnown RBP8.18□□□□□ -1.1
ABCD3-202ENST00000370214 RWDD2AQ9UIY3 292 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 ZBTB21Q9ULJ3 1066 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 BAZ2AQ9UIF9 1905 aaKnown RBP8.18□□□□□ -1.1
ABCD3-202ENST00000370214 MRC1P22897 1456 aa8.18□□□□□ -1.1
ABCD3-202ENST00000370214 MYMKA6NI61 221 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 DDX39AO00148 427 aaKnown RBP8.17□□□□□ -1.1
ABCD3-202ENST00000370214 HGSO14964 777 aaPredicted RBP8.17□□□□□ -1.1
ABCD3-202ENST00000370214 BAG3O95817 575 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 OR52Z1P0C646 297 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 EHHADHQ08426 723 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 NONOQ15233 471 aaKnown RBP eCLIP8.17□□□□□ -1.1
ABCD3-202ENST00000370214 CALCRLQ16602 461 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 NBPF9Q3BBW0 867 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 HERC4Q5GLZ8 1057 aaPredicted RBP8.17□□□□□ -1.1
ABCD3-202ENST00000370214 HDXQ7Z353 690 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 ZFPM1Q8IX07 1006 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 ADSSL1Q8N142 457 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 REXO1Q8N1G1 1221 aaKnown RBP8.17□□□□□ -1.1
ABCD3-202ENST00000370214 ZNF579Q8NAF0 562 aaKnown RBP8.17□□□□□ -1.1
ABCD3-202ENST00000370214 ZNF512BQ96KM6 892 aaPredicted RBP8.17□□□□□ -1.1
ABCD3-202ENST00000370214 AK7Q96M32 723 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 ADAMTS1Q9UHI8 967 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 KIAA1024Q9UPX6 916 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 WDR19Q8NEZ3 1342 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 COL4A1P02462 1669 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 ABCC6O95255 1503 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.17□□□□□ -1.1
ABCD3-202ENST00000370214 GOLGA6L9A6NEM1 432 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 USP17L10C9JJH3 530 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 RNF40O75150 1001 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 EIF3JO75822 258 aaKnown RBP8.17□□□□□ -1.1
ABCD3-202ENST00000370214 RASA1P20936 1047 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 HPDP32754 393 aaPredicted RBP8.17□□□□□ -1.1
ABCD3-202ENST00000370214 PABPC4Q13310 644 aaKnown RBP eCLIP8.17□□□□□ -1.12e-8■■■■■ 36.1
ABCD3-202ENST00000370214 ECM1Q16610 540 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 TRIML1Q8N9V2 468 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 SMARCC1Q92922 1105 aaPredicted RBP8.17□□□□□ -1.1
ABCD3-202ENST00000370214 BRIP1Q9BX63 1249 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 PACSIN1Q9BY11 444 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 TNS2Q63HR2 1409 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 ZNF263O14978 683 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 ZBTB39O15060 712 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 COPB2P35606 906 aa8.17□□□□□ -1.1
ABCD3-202ENST00000370214 MAGEA1P43355 309 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms