RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 ZNF654Q8IZM8 581 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 RMDN2Q96LZ7 410 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 SLC39A2Q9NP94 309 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 RRP15Q9Y3B9 282 aaKnown RBP13.54□□□□□ -0.24
HCFC1-202ENST00000369984 A0A1W2PP64 1363 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 ZNF500O60304 480 aaPredicted RBP13.54□□□□□ -0.24
HCFC1-202ENST00000369984 GPC4O75487 556 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 POLR2BP30876 1174 aaKnown RBP13.54□□□□□ -0.24
HCFC1-202ENST00000369984 IQCB1Q15051 598 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 EFHD1Q9BUP0 239 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 ANGPTL3Q9Y5C1 460 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 UHRF1BP1LA0JNW5 1464 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 PPARAQ07869 468 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 OLA1Q9NTK5 396 aaKnown RBP13.54□□□□□ -0.24
HCFC1-202ENST00000369984 ARPP21Q9UBL0 812 aaPredicted RBP13.54□□□□□ -0.24
HCFC1-202ENST00000369984 SH3TC1Q8TE82 1336 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 NVLO15381 856 aaKnown RBP13.54□□□□□ -0.24
HCFC1-202ENST00000369984 STX1BP61266 288 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 DPP8Q6V1X1 898 aaPredicted RBP13.54□□□□□ -0.24
HCFC1-202ENST00000369984 TRIML1Q8N9V2 468 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 TXLNGQ9NUQ3 528 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.54□□□□□ -0.24
HCFC1-202ENST00000369984 GJC2Q5T442 439 aaPredicted RBP13.54□□□□□ -0.24
HCFC1-202ENST00000369984 RABGGTAQ92696 567 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 ATP6V0A1Q93050 837 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 CENPKQ9BS16 269 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 TEKT2Q9UIF3 430 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 MYL7Q01449 175 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 E2F5Q15329 346 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 ZKSCAN8Q15776 578 aaPredicted RBP13.54□□□□□ -0.24
HCFC1-202ENST00000369984 EXOC3L4Q17RC7 722 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 GNPTABQ3T906 1256 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 TRIM42Q8IWZ5 723 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 HAUS4Q9H6D7 363 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 INTUQ9ULD6 942 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 PCDHB4Q9Y5E5 795 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 UNC13AQ9UPW8 1703 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 ADAM9Q13443 819 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 ART3Q13508 389 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 FAM133BQ5BKY9 247 aaKnown RBP13.53□□□□□ -0.24
HCFC1-202ENST00000369984 PNMA6EA0A0J9YXQ4 647 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 TMOD1P28289 359 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 POLGP54098 1239 aaPredicted RBP13.53□□□□□ -0.24
HCFC1-202ENST00000369984 RFX6Q8HWS3 928 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 MAGOHBQ96A72 148 aaKnown RBP13.53□□□□□ -0.24
HCFC1-202ENST00000369984 CEP19Q96LK0 163 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 WBP4O75554 376 aaKnown RBP13.53□□□□□ -0.24
HCFC1-202ENST00000369984 ZAP70P43403 619 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 NSFP46459 744 aaKnown RBP13.53□□□□□ -0.24
HCFC1-202ENST00000369984 MED23Q9ULK4 1368 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 CPP00450 1065 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 GFAPP14136 432 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 MESDQ14696 234 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 ZNF274Q96GC6 653 aaPredicted RBP13.53□□□□□ -0.24
HCFC1-202ENST00000369984 HESX1Q9UBX0 185 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 CDC25BP30305 580 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 TMED2Q15363 201 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 MYSM1Q5VVJ2 828 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 RNF169Q8NCN4 708 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 N4BP2L2Q92802 583 aaPredicted RBP13.53□□□□□ -0.24
HCFC1-202ENST00000369984 FGD4Q96M96 766 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 EYA1Q99502 592 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 PDE6AP16499 860 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 SESTD1Q86VW0 696 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 MKL2Q9ULH7 1088 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 ATP8A1Q9Y2Q0 1164 aa13.53□□□□□ -0.24
HCFC1-202ENST00000369984 ENC1O14682 589 aa13.52□□□□□ -0.24
HCFC1-202ENST00000369984 XKR9Q5GH70 373 aa13.52□□□□□ -0.24
HCFC1-202ENST00000369984 ADPGKQ9BRR6 497 aa13.52□□□□□ -0.24
HCFC1-202ENST00000369984 MLXIPQ9HAP2 919 aa13.52□□□□□ -0.24
HCFC1-202ENST00000369984 MAST1Q9Y2H9 1570 aa13.52□□□□□ -0.24
HCFC1-202ENST00000369984 GRIN2AQ12879 1464 aa13.52□□□□□ -0.24
HCFC1-202ENST00000369984 CCDC159P0C7I6 412 aa13.52□□□□□ -0.24
HCFC1-202ENST00000369984 MCUQ8NE86 351 aa13.52□□□□□ -0.24
HCFC1-202ENST00000369984 SYMPKQ92797 1274 aaKnown RBP13.52□□□□□ -0.24
HCFC1-202ENST00000369984 ATP8A2Q9NTI2 1148 aa13.52□□□□□ -0.24
HCFC1-202ENST00000369984 OR52Z1P0C646 297 aa13.52□□□□□ -0.24
HCFC1-202ENST00000369984 ARMCX5Q6P1M9 558 aa13.52□□□□□ -0.24
HCFC1-202ENST00000369984 CNOT6LQ96LI5 555 aaKnown RBP13.52□□□□□ -0.24
HCFC1-202ENST00000369984 JPH2Q9BR39 696 aaPredicted RBP13.52□□□□□ -0.24
HCFC1-202ENST00000369984 EPB41L5Q9HCM4 733 aa13.52□□□□□ -0.24
HCFC1-202ENST00000369984 FBXO2Q9UK22 296 aaPredicted RBP13.52□□□□□ -0.24
HCFC1-202ENST00000369984 SUFUQ9UMX1 484 aa13.52□□□□□ -0.24
HCFC1-202ENST00000369984 HOXC9P31274 260 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 C2orf54Q08AI8 447 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 SNX1Q13596 522 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 ARHGEF18Q6ZSZ5 1173 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.52□□□□□ -0.25
HCFC1-202ENST00000369984 TBK1Q9UHD2 729 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 TSPOAP1O95153 1857 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 ZMYND10O75800 440 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 CCDC92Q53HC0 331 aaPredicted RBP13.52□□□□□ -0.25
HCFC1-202ENST00000369984 GRAMD4Q6IC98 578 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 GDAP1Q8TB36 358 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 SMCR8Q8TEV9 937 aaPredicted RBP13.52□□□□□ -0.25
HCFC1-202ENST00000369984 ATP6V1E2Q96A05 226 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 CCPG1Q9ULG6 757 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 HSPA8P11142 646 aaKnown RBP13.52□□□□□ -0.25
HCFC1-202ENST00000369984 MSH2P43246 934 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 ETF1P62495 437 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms