RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 GNAT2P19087 354 aa11.59□□□□□ -0.55
TPM3-210ENST00000368530 EXOSC10Q01780 885 aaKnown RBP11.59□□□□□ -0.55
TPM3-210ENST00000368530 CTDSPL2Q05D32 466 aa11.59□□□□□ -0.55
TPM3-210ENST00000368530 APOBRQ0VD83 1088 aa11.59□□□□□ -0.55
TPM3-210ENST00000368530 GRIN2CQ14957 1233 aa11.59□□□□□ -0.55
TPM3-210ENST00000368530 RASIP1Q5U651 963 aa11.59□□□□□ -0.55
TPM3-210ENST00000368530 NUP133Q8WUM0 1156 aa11.59□□□□□ -0.55
TPM3-210ENST00000368530 DDX11Q96FC9 970 aa11.59□□□□□ -0.55
TPM3-210ENST00000368530 CEP95Q96GE4 821 aa11.59□□□□□ -0.55
TPM3-210ENST00000368530 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.59□□□□□ -0.553e-15■■■□□ 16.8
TPM3-210ENST00000368530 UPF3AQ9H1J1 476 aaKnown RBP11.59□□□□□ -0.55
TPM3-210ENST00000368530 RAVER2Q9HCJ3 691 aaKnown RBP11.59□□□□□ -0.55
TPM3-210ENST00000368530 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.59□□□□□ -0.55
TPM3-210ENST00000368530 MTMR4Q9NYA4 1195 aa11.59□□□□□ -0.55
TPM3-210ENST00000368530 ZDHHC9Q9Y397 364 aa11.59□□□□□ -0.55
TPM3-210ENST00000368530 ELP1O95163 1332 aa11.59□□□□□ -0.55
TPM3-210ENST00000368530 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.58□□□□□ -0.56
TPM3-210ENST00000368530 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.58□□□□□ -0.56
TPM3-210ENST00000368530 DCDC2CA8MYV0 355 aa11.58□□□□□ -0.56
TPM3-210ENST00000368530 MINDY4BA8MYZ0 360 aa11.58□□□□□ -0.56
TPM3-210ENST00000368530 PRDM1O75626 825 aa11.58□□□□□ -0.56
TPM3-210ENST00000368530 GJB2P29033 226 aa11.58□□□□□ -0.56
TPM3-210ENST00000368530 GJA9P57773 515 aa11.58□□□□□ -0.56
TPM3-210ENST00000368530 GSE1Q14687 1217 aa11.58□□□□□ -0.56
TPM3-210ENST00000368530 ALX1Q15699 326 aa11.58□□□□□ -0.56
TPM3-210ENST00000368530 CCDC144BQ3MJ40 725 aa11.58□□□□□ -0.56
TPM3-210ENST00000368530 MFSD5Q6N075 450 aa11.58□□□□□ -0.56
TPM3-210ENST00000368530 RALYLQ86SE5 291 aaKnown RBP11.58□□□□□ -0.56
TPM3-210ENST00000368530 MB21D2Q8IYB1 491 aaPredicted RBP11.58□□□□□ -0.56
TPM3-210ENST00000368530 CPXCR1Q8N123 301 aa11.58□□□□□ -0.56
TPM3-210ENST00000368530 NCOA7Q8NI08 942 aa11.58□□□□□ -0.56
TPM3-210ENST00000368530 NACAP1Q9BZK3 213 aa11.58□□□□□ -0.56
TPM3-210ENST00000368530 TSPYL2Q9H2G4 693 aaPredicted RBP11.58□□□□□ -0.56
TPM3-210ENST00000368530 MKNK2Q9HBH9 465 aa11.58□□□□□ -0.56
TPM3-210ENST00000368530 INCENPQ9NQS7 918 aa11.58□□□□□ -0.56
TPM3-210ENST00000368530 GPHNQ9NQX3 736 aaPredicted RBP11.58□□□□□ -0.56
TPM3-210ENST00000368530 ZHX1Q9UKY1 873 aaPredicted RBP11.58□□□□□ -0.56
TPM3-210ENST00000368530 CHD9Q3L8U1 2897 aa11.58□□□□□ -0.56
TPM3-210ENST00000368530 PRC1O43663 620 aa11.57□□□□□ -0.56
TPM3-210ENST00000368530 ZBED4O75132 1171 aa11.57□□□□□ -0.56
TPM3-210ENST00000368530 ASGR1P07306 291 aa11.57□□□□□ -0.56
TPM3-210ENST00000368530 FOSL2P15408 326 aa11.57□□□□□ -0.56
TPM3-210ENST00000368530 DNAJB2P25686 324 aa11.57□□□□□ -0.56
TPM3-210ENST00000368530 TRDNQ13061 729 aa11.57□□□□□ -0.56
TPM3-210ENST00000368530 TMEM240Q5SV17 173 aa11.57□□□□□ -0.56
TPM3-210ENST00000368530 FAM133AQ8N9E0 248 aa11.57□□□□□ -0.56
TPM3-210ENST00000368530 USP38Q8NB14 1042 aa11.57□□□□□ -0.56
TPM3-210ENST00000368530 GMCL1P1Q8NEA9 526 aa11.57□□□□□ -0.56
TPM3-210ENST00000368530 CHST13Q8NET6 341 aa11.57□□□□□ -0.56
TPM3-210ENST00000368530 KIFC2Q96AC6 838 aa11.57□□□□□ -0.56
TPM3-210ENST00000368530 ABHD16BQ9H3Z7 469 aa11.57□□□□□ -0.56
TPM3-210ENST00000368530 FEM1BQ9UK73 627 aa11.57□□□□□ -0.56
TPM3-210ENST00000368530 SYNPO2Q9UMS6 1093 aa11.57□□□□□ -0.56
TPM3-210ENST00000368530 ZNF536O15090 1300 aa11.57□□□□□ -0.56
TPM3-210ENST00000368530 NEDD4P46934 1319 aa11.57□□□□□ -0.56
TPM3-210ENST00000368530 TTC28Q96AY4 2481 aa11.57□□□□□ -0.56
TPM3-210ENST00000368530 B4E1Z4 1266 aa11.56□□□□□ -0.56
TPM3-210ENST00000368530 BAG4O95429 457 aaKnown RBP11.56□□□□□ -0.56
TPM3-210ENST00000368530 MCM5P33992 734 aa11.56□□□□□ -0.56
TPM3-210ENST00000368530 OAZ1P54368 228 aa11.56□□□□□ -0.56
TPM3-210ENST00000368530 ANTXR2P58335 489 aa11.56□□□□□ -0.56
TPM3-210ENST00000368530 CNTN2Q02246 1040 aa11.56□□□□□ -0.56
TPM3-210ENST00000368530 ARMCX2Q7L311 632 aa11.56□□□□□ -0.56
TPM3-210ENST00000368530 FAM126BQ8IXS8 530 aa11.56□□□□□ -0.56
TPM3-210ENST00000368530 CCDC144CPQ8IYA2 1237 aa11.56□□□□□ -0.56
TPM3-210ENST00000368530 SLC43A3Q8NBI5 491 aa11.56□□□□□ -0.56
TPM3-210ENST00000368530 NEDD1Q8NHV4 660 aa11.56□□□□□ -0.56
TPM3-210ENST00000368530 CHAMP1Q96JM3 812 aa11.56□□□□□ -0.56
TPM3-210ENST00000368530 ASTN1O14525 1302 aa11.56□□□□□ -0.56
TPM3-210ENST00000368530 ZMYM6O95789 1325 aa11.56□□□□□ -0.56
TPM3-210ENST00000368530 TCHHQ07283 1943 aa11.56□□□□□ -0.56
TPM3-210ENST00000368530 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.55□□□□□ -0.56
TPM3-210ENST00000368530 SOWAHBA6NEL2 793 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 DDX11L8A8MPP1 907 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 GRXCR1A8MXD5 290 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 ARVCFO00192 962 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 BRD1O95696 1058 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 TTLL1O95922 423 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 CD4P01730 458 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 C6orf222P0C671 652 aaPredicted RBP11.55□□□□□ -0.56
TPM3-210ENST00000368530 CSF2RAP15509 400 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 PBX2P40425 430 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 CCT2P78371 535 aaKnown RBP11.55□□□□□ -0.56
TPM3-210ENST00000368530 RRP12Q5JTH9 1297 aaKnown RBP11.55□□□□□ -0.56
TPM3-210ENST00000368530 MCTP1Q6DN14 999 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 CYB5R4Q7L1T6 521 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 ZNF444Q8N0Y2 327 aaPredicted RBP11.55□□□□□ -0.56
TPM3-210ENST00000368530 LRRC47Q8N1G4 583 aaKnown RBP11.55□□□□□ -0.56
TPM3-210ENST00000368530 ANKRD35Q8N283 1001 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 PCSK9Q8NBP7 692 aaKnown RBP11.55□□□□□ -0.56
TPM3-210ENST00000368530 GTF3C6Q969F1 213 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 GLT1D1Q96MS3 346 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 ZNF576Q9H609 170 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 TOMM22Q9NS69 142 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 FBXO40Q9UH90 709 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 PLIN4Q96Q06 1357 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 MUC3AQ02505 3323 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 BMP3P12645 472 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 SYT1P21579 422 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 PTGS1P23219 599 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms