RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 ABCB11O95342 1321 aa17.89■□□□□ 0.45
PRKN-203ENST00000366894 FRMPD3Q5JV73 1810 aa17.88■□□□□ 0.45
PRKN-203ENST00000366894 PNMA6FA0A0J9YX94 578 aa17.88■□□□□ 0.45
PRKN-203ENST00000366894 METAP2P50579 478 aaKnown RBP eCLIP17.88■□□□□ 0.45
PRKN-203ENST00000366894 AKAP17AQ02040 695 aaKnown RBP17.88■□□□□ 0.45
PRKN-203ENST00000366894 RTN1Q16799 776 aa17.88■□□□□ 0.45
PRKN-203ENST00000366894 MUM1L1Q5H9M0 696 aa17.88■□□□□ 0.45
PRKN-203ENST00000366894 TEX2Q8IWB9 1127 aa17.88■□□□□ 0.45
PRKN-203ENST00000366894 MSL3Q8N5Y2 521 aaKnown RBP17.88■□□□□ 0.45
PRKN-203ENST00000366894 DEFB123Q8N688 67 aa17.88■□□□□ 0.45
PRKN-203ENST00000366894 TINF2Q9BSI4 451 aa17.88■□□□□ 0.45
PRKN-203ENST00000366894 EVCP57679 992 aa17.87■□□□□ 0.45
PRKN-203ENST00000366894 CDC37Q16543 378 aaPredicted RBP17.87■□□□□ 0.45
PRKN-203ENST00000366894 MICU3Q86XE3 530 aa17.87■□□□□ 0.45
PRKN-203ENST00000366894 C11orf49Q9H6J7 331 aa17.87■□□□□ 0.45
PRKN-203ENST00000366894 JMJD4Q9H9V9 463 aa17.87■□□□□ 0.45
PRKN-203ENST00000366894 A1CFQ9NQ94 594 aaKnown RBP17.87■□□□□ 0.45
PRKN-203ENST00000366894 DDX20Q9UHI6 824 aaKnown RBP17.87■□□□□ 0.45
PRKN-203ENST00000366894 LOC102724159A0A0B4J2E5 919 aa17.86■□□□□ 0.45
PRKN-203ENST00000366894 GOLGA8AA7E2F4 631 aa17.86■□□□□ 0.45
PRKN-203ENST00000366894 GOLGA8BA8MQT2 603 aa17.86■□□□□ 0.45
PRKN-203ENST00000366894 RBM25P49756 843 aaKnown RBP17.86■□□□□ 0.45
PRKN-203ENST00000366894 NEK4P51957 841 aa17.86■□□□□ 0.45
PRKN-203ENST00000366894 PWP2Q15269 919 aaKnown RBP17.86■□□□□ 0.45
PRKN-203ENST00000366894 LRIT3Q3SXY7 679 aa17.86■□□□□ 0.45
PRKN-203ENST00000366894 MAMDC4Q6UXC1 1216 aa17.86■□□□□ 0.45
PRKN-203ENST00000366894 STAG2Q8N3U4 1231 aa17.86■□□□□ 0.45
PRKN-203ENST00000366894 FAM133AQ8N9E0 248 aa17.86■□□□□ 0.45
PRKN-203ENST00000366894 ADD3Q9UEY8 706 aaKnown RBP17.86■□□□□ 0.45
PRKN-203ENST00000366894 ASTN1O14525 1302 aa17.85■□□□□ 0.45
PRKN-203ENST00000366894 CPLX1O14810 134 aa17.85■□□□□ 0.45
PRKN-203ENST00000366894 CDKL5O76039 1030 aa17.85■□□□□ 0.45
PRKN-203ENST00000366894 SEC24BO95487 1268 aa17.85■□□□□ 0.45
PRKN-203ENST00000366894 SNAI1O95863 264 aaPredicted RBP17.85■□□□□ 0.45
PRKN-203ENST00000366894 LCTP09848 1927 aa17.85■□□□□ 0.45
PRKN-203ENST00000366894 CNGA1P29973 690 aa17.85■□□□□ 0.45
PRKN-203ENST00000366894 MAGEA10P43363 369 aaPredicted RBP17.85■□□□□ 0.45
PRKN-203ENST00000366894 CNTN2Q02246 1040 aa17.85■□□□□ 0.45
PRKN-203ENST00000366894 ZNF467Q7Z7K2 595 aaPredicted RBP17.85■□□□□ 0.45
PRKN-203ENST00000366894 TDHQ8IZJ6 230 aa17.85■□□□□ 0.45
PRKN-203ENST00000366894 CLEC4DQ8WXI8 215 aa17.85■□□□□ 0.45
PRKN-203ENST00000366894 MTMR8Q96EF0 704 aa17.85■□□□□ 0.45
PRKN-203ENST00000366894 TCEANC2Q96MN5 208 aa17.85■□□□□ 0.45
PRKN-203ENST00000366894 GLT8D2Q9H1C3 349 aa17.85■□□□□ 0.45
PRKN-203ENST00000366894 GPHNQ9NQX3 736 aaPredicted RBP17.85■□□□□ 0.45
PRKN-203ENST00000366894 STXBP5LQ9Y2K9 1186 aa17.85■□□□□ 0.45
PRKN-203ENST00000366894 PCDHA1Q9Y5I3 950 aa17.85■□□□□ 0.45
PRKN-203ENST00000366894 SOWAHBA6NEL2 793 aa17.84■□□□□ 0.45
PRKN-203ENST00000366894 POTEB2H3BUK9 544 aa17.84■□□□□ 0.45
PRKN-203ENST00000366894 hCG_1984214I3L0E3 225 aa17.84■□□□□ 0.45
PRKN-203ENST00000366894 SEPT4O43236 478 aa17.84■□□□□ 0.45
PRKN-203ENST00000366894 ST18O60284 1047 aa17.84■□□□□ 0.45
PRKN-203ENST00000366894 ZNF865P0CJ78 1059 aaPredicted RBP17.84■□□□□ 0.45
PRKN-203ENST00000366894 SYN1P17600 705 aa17.84■□□□□ 0.45
PRKN-203ENST00000366894 APOBRQ0VD83 1088 aa17.84■□□□□ 0.45
PRKN-203ENST00000366894 SLC35G1Q2M3R5 365 aa17.84■□□□□ 0.45
PRKN-203ENST00000366894 QRICH1Q2TAL8 776 aa17.84■□□□□ 0.45
PRKN-203ENST00000366894 ZNF713Q8N859 430 aaPredicted RBP17.84■□□□□ 0.45
PRKN-203ENST00000366894 UPF3BQ9BZI7 483 aaKnown RBP17.84■□□□□ 0.45
PRKN-203ENST00000366894 CYP39A1Q9NYL5 469 aa17.84■□□□□ 0.45
PRKN-203ENST00000366894 NRBP1Q9UHY1 535 aa17.84■□□□□ 0.45
PRKN-203ENST00000366894 SYNGAP1Q96PV0 1343 aa17.83■□□□□ 0.44
PRKN-203ENST00000366894 ASB14A6NK59 587 aa17.83■□□□□ 0.44
PRKN-203ENST00000366894 NFIBO00712 420 aa17.83■□□□□ 0.44
PRKN-203ENST00000366894 COL6A1P12109 1028 aa17.83■□□□□ 0.44
PRKN-203ENST00000366894 CPA1P15085 419 aa17.83■□□□□ 0.44
PRKN-203ENST00000366894 RABEP1Q15276 862 aa17.83■□□□□ 0.44
PRKN-203ENST00000366894 ANO1Q5XXA6 986 aa17.83■□□□□ 0.44
PRKN-203ENST00000366894 RNF207Q6ZRF8 634 aa17.83■□□□□ 0.44
PRKN-203ENST00000366894 TMTC3Q6ZXV5 915 aa17.83■□□□□ 0.44
PRKN-203ENST00000366894 Q7L0L9 218 aa17.83■□□□□ 0.44
PRKN-203ENST00000366894 HOMER1Q86YM7 354 aa17.83■□□□□ 0.44
PRKN-203ENST00000366894 TRIM22Q8IYM9 498 aa17.83■□□□□ 0.44
PRKN-203ENST00000366894 MYL10Q9BUA6 226 aa17.83■□□□□ 0.44
PRKN-203ENST00000366894 BACH2Q9BYV9 841 aa17.83■□□□□ 0.44
PRKN-203ENST00000366894 BRPF3Q9ULD4 1205 aa17.83■□□□□ 0.44
PRKN-203ENST00000366894 PTPDC1A2A3K4 754 aa17.82■□□□□ 0.44
PRKN-203ENST00000366894 MSCO60682 206 aa17.82■□□□□ 0.44
PRKN-203ENST00000366894 PDIA3P30101 505 aaKnown RBP17.82■□□□□ 0.44
PRKN-203ENST00000366894 USH1GQ495M9 461 aa17.82■□□□□ 0.44
PRKN-203ENST00000366894 NSMFQ6X4W1 530 aa17.82■□□□□ 0.44
PRKN-203ENST00000366894 CCDC144CPQ8IYA2 1237 aa17.82■□□□□ 0.44
PRKN-203ENST00000366894 CCDC12Q8WUD4 166 aaPredicted RBP17.82■□□□□ 0.44
PRKN-203ENST00000366894 CUL5Q93034 780 aa17.82■□□□□ 0.44
PRKN-203ENST00000366894 ZSCAN31Q96LW9 406 aaPredicted RBP17.82■□□□□ 0.44
PRKN-203ENST00000366894 PURBQ96QR8 312 aaKnown RBP17.82■□□□□ 0.44
PRKN-203ENST00000366894 UBE2OQ9C0C9 1292 aaKnown RBP17.82■□□□□ 0.44
PRKN-203ENST00000366894 KATNBL1Q9H079 304 aa17.82■□□□□ 0.44
PRKN-203ENST00000366894 SLKQ9H2G2 1235 aaPredicted RBP17.82■□□□□ 0.44
PRKN-203ENST00000366894 DDX49Q9Y6V7 483 aaKnown RBP17.82■□□□□ 0.44
PRKN-203ENST00000366894 MCM3APO60318 1980 aa17.82■□□□□ 0.44
PRKN-203ENST00000366894 MCM2P49736 904 aa17.81■□□□□ 0.44
PRKN-203ENST00000366894 SRBD1Q8N5C6 995 aaKnown RBP17.81■□□□□ 0.44
PRKN-203ENST00000366894 DNERQ8NFT8 737 aa17.81■□□□□ 0.44
PRKN-203ENST00000366894 PIGSQ96S52 555 aa17.81■□□□□ 0.44
PRKN-203ENST00000366894 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.81■□□□□ 0.44
PRKN-203ENST00000366894 CNPY2Q9Y2B0 182 aa17.81■□□□□ 0.44
PRKN-203ENST00000366894 UNC80Q8N2C7 3258 aa17.8■□□□□ 0.44
PRKN-203ENST00000366894 RXRAP19793 462 aa17.8■□□□□ 0.44
PRKN-203ENST00000366894 BAATQ14032 418 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms