RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 DHTKD1Q96HY7 919 aaPredicted RBP15.32■□□□□ 0.04
COL6A1-201ENST00000361866 MROH2AA6NES4 1674 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 SHPRHQ149N8 1683 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 PALLDQ8WX93 1383 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 GYPCP04921 128 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 CLTAP09496 248 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 VPS41P49754 854 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 ADAM9Q13443 819 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 SGMS1Q86VZ5 419 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 ANKRD42Q8N9B4 389 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 PIGBQ92521 554 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 ANKRD2Q9GZV1 360 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 NDST4Q9H3R1 872 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 SMARCAL1Q9NZC9 954 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 ARPP21Q9UBL0 812 aaPredicted RBP15.32■□□□□ 0.04
COL6A1-201ENST00000361866 LGALS16A8MUM7 142 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 RPSAP08865 295 aaKnown RBP15.32■□□□□ 0.04
COL6A1-201ENST00000361866 TRAPPC10P48553 1259 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 USH1GQ495M9 461 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 USP17L2Q6R6M4 530 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 FAM133AQ8N9E0 248 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 TBCKQ8TEA7 893 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 PLVAPQ9BX97 442 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 PCDHA4Q9UN74 947 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 GNPATO15228 680 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 USP14P54578 494 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 CYP4A11Q02928 519 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 ZNF622Q969S3 477 aaKnown RBP eCLIP15.32■□□□□ 0.04
COL6A1-201ENST00000361866 AP1M1Q9BXS5 423 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 AGPAT5Q9NUQ2 364 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 STK38LQ9Y2H1 464 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 ANKARQ7Z5J8 1434 aa15.31■□□□□ 0.04
COL6A1-201ENST00000361866 CEMIPQ8WUJ3 1361 aa15.31■□□□□ 0.04
COL6A1-201ENST00000361866 H3BQF6 201 aa15.31■□□□□ 0.04
COL6A1-201ENST00000361866 SASH3O75995 380 aa15.31■□□□□ 0.04
COL6A1-201ENST00000361866 TMOD2Q9NZR1 351 aa15.31■□□□□ 0.04
COL6A1-201ENST00000361866 ARMCX3Q9UH62 379 aaPredicted RBP15.31■□□□□ 0.04
COL6A1-201ENST00000361866 ACTN4O43707 911 aaKnown RBP15.31■□□□□ 0.04
COL6A1-201ENST00000361866 UFL1O94874 794 aa15.31■□□□□ 0.04
COL6A1-201ENST00000361866 PRPHP41219 470 aa15.31■□□□□ 0.04
COL6A1-201ENST00000361866 PTPAQ15257 358 aa15.31■□□□□ 0.04
COL6A1-201ENST00000361866 CCDC105Q8IYK2 499 aa15.31■□□□□ 0.04
COL6A1-201ENST00000361866 COG1Q8WTW3 980 aa15.31■□□□□ 0.04
COL6A1-201ENST00000361866 GJA10Q969M2 543 aa15.31■□□□□ 0.04
COL6A1-201ENST00000361866 RSRC1Q96IZ7 334 aaKnown RBP15.31■□□□□ 0.04
COL6A1-201ENST00000361866 PACSIN2Q9UNF0 486 aaPredicted RBP15.31■□□□□ 0.04
COL6A1-201ENST00000361866 TRIM65Q6PJ69 517 aa15.31■□□□□ 0.04
COL6A1-201ENST00000361866 SH2D3CQ8N5H7 860 aa15.31■□□□□ 0.04
COL6A1-201ENST00000361866 LARP4BQ92615 738 aaKnown RBP15.31■□□□□ 0.04
COL6A1-201ENST00000361866 PANK4Q9NVE7 773 aa15.31■□□□□ 0.04
COL6A1-201ENST00000361866 STIM2Q9P246 746 aa15.31■□□□□ 0.04
COL6A1-201ENST00000361866 RFX7Q2KHR2 1363 aa15.3■□□□□ 0.04
COL6A1-201ENST00000361866 XRCC5P13010 732 aaKnown RBP15.3■□□□□ 0.04
COL6A1-201ENST00000361866 ZRSR2Q15696 482 aaKnown RBP15.3■□□□□ 0.04
COL6A1-201ENST00000361866 TMTC3Q6ZXV5 915 aa15.3■□□□□ 0.04
COL6A1-201ENST00000361866 CCDC170Q8IYT3 715 aa15.3■□□□□ 0.04
COL6A1-201ENST00000361866 STAG1Q8WVM7 1258 aa15.3■□□□□ 0.04
COL6A1-201ENST00000361866 MYCBPQ99417 103 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-201ENST00000361866 ASIC3Q9UHC3 531 aa15.3■□□□□ 0.04
COL6A1-201ENST00000361866 GKAP1Q5VSY0 366 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-201ENST00000361866 FNBP4Q8N3X1 1017 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-201ENST00000361866 COA7Q96BR5 231 aa15.3■□□□□ 0.04
COL6A1-201ENST00000361866 ATP8A1Q9Y2Q0 1164 aa15.3■□□□□ 0.04
COL6A1-201ENST00000361866 A0A1B0GUA9 196 aa15.3■□□□□ 0.04
COL6A1-201ENST00000361866 NR1D1P20393 614 aa15.3■□□□□ 0.04
COL6A1-201ENST00000361866 DIXDC1Q155Q3 683 aa15.3■□□□□ 0.04
COL6A1-201ENST00000361866 MAN2A1Q16706 1144 aa15.3■□□□□ 0.04
COL6A1-201ENST00000361866 SUSD4Q5VX71 490 aa15.3■□□□□ 0.04
COL6A1-201ENST00000361866 RETREG2Q8NC44 543 aa15.3■□□□□ 0.04
COL6A1-201ENST00000361866 SERPINA10Q9UK55 444 aa15.3■□□□□ 0.04
COL6A1-201ENST00000361866 MTUS1Q9ULD2 1270 aa15.3■□□□□ 0.04
COL6A1-201ENST00000361866 KIAA1024Q9UPX6 916 aa15.3■□□□□ 0.04
COL6A1-201ENST00000361866 RGS16O15492 202 aaPredicted RBP15.29■□□□□ 0.04
COL6A1-201ENST00000361866 ZBTB16Q05516 673 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 ADCY1Q08828 1119 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 SEL1L2Q5TEA6 688 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 RASGRP2Q7LDG7 609 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 BICD1Q96G01 975 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 CCDC77Q9BR77 488 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 DNM3Q9UQ16 869 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 FRMD4BQ9Y2L6 1034 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 DEPDC5O75140 1603 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 PIK3C2BO00750 1634 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 H2AFZP0C0S5 128 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 GFPT1Q06210 699 aaPredicted RBP15.29■□□□□ 0.04
COL6A1-201ENST00000361866 H2AFVQ71UI9 128 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 LRRC1Q9BTT6 524 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 AMFRQ9UKV5 643 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 STK36Q9NRP7 1315 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 BACH1O14867 736 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 SEMA3EO15041 775 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 PLCG2P16885 1265 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 CDC42BPGQ6DT37 1551 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 MYCT1Q8N699 235 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 BANK1Q8NDB2 785 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 ZC3H12CQ9C0D7 883 aaKnown RBP15.29■□□□□ 0.04
COL6A1-201ENST00000361866 STMN4Q9H169 189 aaPredicted RBP15.29■□□□□ 0.04
COL6A1-201ENST00000361866 ABCA9Q8IUA7 1624 aa15.29■□□□□ 0.04
COL6A1-201ENST00000361866 STAT1P42224 750 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 TCP10Q12799 353 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms