RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 TBX22Q9Y458 520 aa15.28■□□□□ 0.04
SMC5-201ENST00000361138 IFNAR1P17181 557 aa15.28■□□□□ 0.04
SMC5-201ENST00000361138 ZKSCAN8Q15776 578 aaPredicted RBP15.28■□□□□ 0.04
SMC5-201ENST00000361138 ZNF579Q8NAF0 562 aaKnown RBP15.28■□□□□ 0.04
SMC5-201ENST00000361138 ARMCX3Q9UH62 379 aaPredicted RBP15.28■□□□□ 0.04
SMC5-201ENST00000361138 PCDHA4Q9UN74 947 aa15.28■□□□□ 0.04
SMC5-201ENST00000361138 EXOC3O60645 756 aa15.28■□□□□ 0.04
SMC5-201ENST00000361138 ADAM9Q13443 819 aa15.28■□□□□ 0.04
SMC5-201ENST00000361138 DPF2Q92785 391 aa15.28■□□□□ 0.04
SMC5-201ENST00000361138 GJB4Q9NTQ9 266 aa15.28■□□□□ 0.04
SMC5-201ENST00000361138 USTQ9Y2C2 406 aa15.28■□□□□ 0.04
SMC5-201ENST00000361138 PCDHB13Q9Y5F0 798 aa15.28■□□□□ 0.04
SMC5-201ENST00000361138 SERPING1P05155 500 aa15.27■□□□□ 0.04
SMC5-201ENST00000361138 MRPS25P82663 173 aaKnown RBP15.27■□□□□ 0.04
SMC5-201ENST00000361138 IL9RQ01113 521 aa15.27■□□□□ 0.04
SMC5-201ENST00000361138 SH2D4BQ5SQS7 431 aa15.27■□□□□ 0.04
SMC5-201ENST00000361138 SEPT14Q6ZU15 432 aa15.27■□□□□ 0.04
SMC5-201ENST00000361138 GPHNQ9NQX3 736 aaPredicted RBP15.27■□□□□ 0.04
SMC5-201ENST00000361138 RFX7Q2KHR2 1363 aa15.27■□□□□ 0.04
SMC5-201ENST00000361138 PSMC4P43686 418 aa15.27■□□□□ 0.04
SMC5-201ENST00000361138 EIF3BP55884 814 aaKnown RBP15.27■□□□□ 0.04
SMC5-201ENST00000361138 PARP10Q53GL7 1025 aa15.27■□□□□ 0.04
SMC5-201ENST00000361138 UIMC1Q96RL1 719 aa15.27■□□□□ 0.04
SMC5-201ENST00000361138 OPHN1O60890 802 aa15.27■□□□□ 0.04
SMC5-201ENST00000361138 HSPA1LP34931 641 aa15.27■□□□□ 0.04
SMC5-201ENST00000361138 PARP9Q8IXQ6 854 aa15.27■□□□□ 0.04
SMC5-201ENST00000361138 VIPAS39Q9H9C1 493 aa15.27■□□□□ 0.04
SMC5-201ENST00000361138 LARSQ9P2J5 1176 aaKnown RBP15.27■□□□□ 0.04
SMC5-201ENST00000361138 EIF6P56537 245 aaKnown RBP15.27■□□□□ 0.03
SMC5-201ENST00000361138 NLRP14Q86W24 1093 aa15.27■□□□□ 0.03
SMC5-201ENST00000361138 COG1Q8WTW3 980 aa15.27■□□□□ 0.03
SMC5-201ENST00000361138 DAAM1Q9Y4D1 1078 aa15.27■□□□□ 0.03
SMC5-201ENST00000361138 LRRC8CQ8TDW0 803 aa15.27■□□□□ 0.03
SMC5-201ENST00000361138 AK8Q96MA6 479 aa15.27■□□□□ 0.03
SMC5-201ENST00000361138 SETSIPP0DME0 302 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 ATF2P15336 505 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 TTLL7Q6ZT98 887 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 HDAC6Q9UBN7 1215 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 PNPLA6Q8IY17 1366 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 USP17L12C9JPN9 530 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 USP17L21D6R901 530 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 PTPREP23469 700 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 ITIH3Q06033 890 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 SPZ1Q9BXG8 430 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 NOP53Q9NZM5 478 aaKnown RBP15.26■□□□□ 0.03
SMC5-201ENST00000361138 PARP3Q9Y6F1 533 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 PRAMEF22A3QJZ6 481 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 TSGA10IPQ3SY00 556 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 CEP120Q8N960 986 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 TXLNGQ9NUQ3 528 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 CASQ2O14958 399 aaPredicted RBP15.26■□□□□ 0.03
SMC5-201ENST00000361138 EVI5O60447 810 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 C10orf76Q5T2E6 689 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 ZBTB38Q8NAP3 1195 aaPredicted RBP15.26■□□□□ 0.03
SMC5-201ENST00000361138 CFAP57Q96MR6 1250 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 EXOC7Q9UPT5 735 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 PTPN22Q9Y2R2 807 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 USP6P35125 1406 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 E9PCH4 1651 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 PHKG2P15735 406 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 RFC4P35249 363 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 EXOC3L4Q17RC7 722 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 NBPF9Q3BBW0 867 aa15.26■□□□□ 0.03
SMC5-201ENST00000361138 TEX33O43247 280 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 LMNB1P20700 586 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 FNBP1Q96RU3 617 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 FHOD1Q9Y613 1164 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 BAG2O95816 211 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 PCP11498 1178 aaKnown RBP15.25■□□□□ 0.03
SMC5-201ENST00000361138 CCNE1P24864 410 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 PHBP35232 272 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 PLTPP55058 493 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 LGALS16A8MUM7 142 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 PLA2G4AP47712 749 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 BIRC3Q13489 604 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 CUL4BQ13620 913 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 MTF1Q14872 753 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 LGSNQ5TDP6 509 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 SDCCAG8Q86SQ7 713 aaPredicted RBP15.25■□□□□ 0.03
SMC5-201ENST00000361138 TBC1D1Q86TI0 1168 aaPredicted RBP15.25■□□□□ 0.03
SMC5-201ENST00000361138 ACSBG1Q96GR2 724 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 RILPQ96NA2 401 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 DNAJC5Q9H3Z4 198 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 CD2APQ9Y5K6 639 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 LRRIQ1Q96JM4 1722 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 ARHGEF35A5YM69 484 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 IRX4P78413 519 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 FAM26FQ5R3K3 315 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 FAM133AQ8N9E0 248 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 RUBCNQ92622 972 aa15.25■□□□□ 0.03
SMC5-201ENST00000361138 PRPF3O43395 683 aaKnown RBP15.24■□□□□ 0.03
SMC5-201ENST00000361138 RASIP1Q5U651 963 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 SHC4Q6S5L8 630 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 PPP1R21Q6ZMI0 780 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 BBOF1Q8ND07 529 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 AP1M1Q9BXS5 423 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 KLC4Q9NSK0 619 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 USP42Q9H9J4 1324 aaKnown RBP15.24■□□□□ 0.03
SMC5-201ENST00000361138 ARHGEF40Q8TER5 1519 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 SETBP1Q9Y6X0 1596 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms