RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 KRT40Q6A162 431 aa17.08■□□□□ 0.32
CCNE1-202ENST00000357943 CUL5Q93034 780 aa17.08■□□□□ 0.32
CCNE1-202ENST00000357943 PURBQ96QR8 312 aaKnown RBP17.08■□□□□ 0.32
CCNE1-202ENST00000357943 ZSWIM8A7E2V4 1837 aa17.08■□□□□ 0.32
CCNE1-202ENST00000357943 GCOM1H8Y6P7 765 aaPredicted RBP17.07■□□□□ 0.32
CCNE1-202ENST00000357943 STRNO43815 780 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 PGK2P07205 417 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 POLR2MP0CAP2 368 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 HSPA8P11142 646 aaKnown RBP17.07■□□□□ 0.32
CCNE1-202ENST00000357943 CALML3P27482 149 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 ADORA2AP29274 412 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 HSD17B4P51659 736 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 ADCY7P51828 1080 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 GHRHRQ02643 423 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 TRIM29Q14134 588 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 KIF22Q14807 665 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 LARP1BQ659C4 914 aaKnown RBP17.07■□□□□ 0.32
CCNE1-202ENST00000357943 ABRAQ8N0Z2 381 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 FBXO18Q8NFZ0 1043 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 IPO9Q96P70 1041 aaKnown RBP17.07■□□□□ 0.32
CCNE1-202ENST00000357943 C6orf50Q9HD87 102 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 COL20A1Q9P218 1284 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 PIK3CDO00329 1044 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 MMP1P03956 469 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 GNA11P29992 359 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 MRPL12P52815 198 aaKnown RBP17.07■□□□□ 0.32
CCNE1-202ENST00000357943 FAM177A1Q8N128 213 aaPredicted RBP17.07■□□□□ 0.32
CCNE1-202ENST00000357943 RASGRP4Q8TDF6 673 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 SYTL5Q8TDW5 730 aaPredicted RBP17.07■□□□□ 0.32
CCNE1-202ENST00000357943 ERO1AQ96HE7 468 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 GJD2Q9UKL4 321 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 PCDHA4Q9UN74 947 aa17.07■□□□□ 0.32
CCNE1-202ENST00000357943 PFASO15067 1338 aa17.06■□□□□ 0.32
CCNE1-202ENST00000357943 DNAJC25-GNG10A0A024R161 153 aa17.06■□□□□ 0.32
CCNE1-202ENST00000357943 SLC15A5A6NIM6 579 aa17.06■□□□□ 0.32
CCNE1-202ENST00000357943 COBLO75128 1261 aa17.06■□□□□ 0.32
CCNE1-202ENST00000357943 SYT1P21579 422 aa17.06■□□□□ 0.32
CCNE1-202ENST00000357943 CLK2P49760 499 aaKnown RBP17.06■□□□□ 0.32
CCNE1-202ENST00000357943 CNTN2Q02246 1040 aa17.06■□□□□ 0.32
CCNE1-202ENST00000357943 MORN1Q5T089 497 aa17.06■□□□□ 0.32
CCNE1-202ENST00000357943 OXER1Q8TDS5 423 aa17.06■□□□□ 0.32
CCNE1-202ENST00000357943 BIN2Q9UBW5 565 aaPredicted RBP17.06■□□□□ 0.32
CCNE1-202ENST00000357943 FCHSD1Q86WN1 690 aa17.05■□□□□ 0.32
CCNE1-202ENST00000357943 BLIDQ8IZY5 108 aa17.05■□□□□ 0.32
CCNE1-202ENST00000357943 SAMD3Q8N6K7 520 aa17.05■□□□□ 0.32
CCNE1-202ENST00000357943 PGBD1Q96JS3 809 aa17.05■□□□□ 0.32
CCNE1-202ENST00000357943 NUDT12Q9BQG2 462 aa17.05■□□□□ 0.32
CCNE1-202ENST00000357943 TMEM260Q9NX78 707 aa17.05■□□□□ 0.32
CCNE1-202ENST00000357943 MAP3K20Q9NYL2 800 aaKnown RBP17.05■□□□□ 0.32
CCNE1-202ENST00000357943 GABRQQ9UN88 632 aa17.05■□□□□ 0.32
CCNE1-202ENST00000357943 H3BQV1 296 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 POTEB2H3BUK9 544 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 M0R2N6 131 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 LBX1P52954 281 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 PRKCZQ05513 592 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 MAP2K5Q13163 448 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 NR5A1Q13285 461 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 IFFO2Q5TF58 517 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 JAKMIP3Q5VZ66 844 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 GALNT17Q6IS24 598 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 DPP9Q86TI2 863 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 DIS3L2Q8IYB7 885 aaKnown RBP17.04■□□□□ 0.32
CCNE1-202ENST00000357943 REXO1Q8N1G1 1221 aaKnown RBP17.04■□□□□ 0.32
CCNE1-202ENST00000357943 FAM133AQ8N9E0 248 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 DAGLBQ8NCG7 672 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 BICD2Q8TD16 824 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 USP6NLQ92738 828 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 TAAR1Q96RJ0 339 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 MAF1Q9H063 256 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 GLT8D2Q9H1C3 349 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 PCDHA6Q9UN73 950 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 PCDHA8Q9Y5H6 950 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 ASTN1O14525 1302 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 PLXNB2O15031 1838 aa17.04■□□□□ 0.32
CCNE1-202ENST00000357943 BTBD18B2RXH4 712 aa17.03■□□□□ 0.32
CCNE1-202ENST00000357943 CYP2B6P20813 491 aa17.03■□□□□ 0.32
CCNE1-202ENST00000357943 PDCP20941 246 aa17.03■□□□□ 0.32
CCNE1-202ENST00000357943 KRT2P35908 639 aa17.03■□□□□ 0.32
CCNE1-202ENST00000357943 CTCFP49711 727 aaPredicted RBP17.03■□□□□ 0.32
CCNE1-202ENST00000357943 FLT3LGP49771 235 aa17.03■□□□□ 0.32
CCNE1-202ENST00000357943 ZNF792Q3KQV3 632 aa17.03■□□□□ 0.32
CCNE1-202ENST00000357943 NPLOC4Q8TAT6 608 aa17.03■□□□□ 0.32
CCNE1-202ENST00000357943 SOCS4Q8WXH5 440 aa17.03■□□□□ 0.32
CCNE1-202ENST00000357943 FGD4Q96M96 766 aa17.03■□□□□ 0.32
CCNE1-202ENST00000357943 DAXXQ9UER7 740 aaPredicted RBP17.03■□□□□ 0.32
CCNE1-202ENST00000357943 DOCK3Q8IZD9 2030 aa17.03■□□□□ 0.32
CCNE1-202ENST00000357943 SOWAHBA6NEL2 793 aa17.03■□□□□ 0.32
CCNE1-202ENST00000357943 RMDN3Q96TC7 470 aa17.03■□□□□ 0.32
CCNE1-202ENST00000357943 SRRDQ9UH36 339 aa17.03■□□□□ 0.32
CCNE1-202ENST00000357943 MGAMO43451 1857 aa17.03■□□□□ 0.32
CCNE1-202ENST00000357943 VPS37CA5D8V6 355 aaPredicted RBP17.02■□□□□ 0.31
CCNE1-202ENST00000357943 SPDYE3A6NKU9 549 aa17.02■□□□□ 0.31
CCNE1-202ENST00000357943 KIF28PB7ZC32 967 aa17.02■□□□□ 0.31
CCNE1-202ENST00000357943 STX6O43752 255 aa17.02■□□□□ 0.31
CCNE1-202ENST00000357943 PKP1Q13835 747 aa17.02■□□□□ 0.31
CCNE1-202ENST00000357943 SAFBQ15424 915 aaKnown RBP eCLIP17.02■□□□□ 0.31
CCNE1-202ENST00000357943 EARS2Q5JPH6 523 aaKnown RBP17.02■□□□□ 0.31
CCNE1-202ENST00000357943 OTOP1Q7RTM1 612 aa17.02■□□□□ 0.31
CCNE1-202ENST00000357943 TEX2Q8IWB9 1127 aa17.02■□□□□ 0.31
CCNE1-202ENST00000357943 BRMS1Q9HCU9 246 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms