RNA–Protein interactions for RNA: ENST00000355612.6

KRT39-201, Transcript of keratin 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT39, Length 1,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-201ENST00000355612 TDRD3Q9H7E2 651 aaKnown RBP7.38□□□□□ -1.23
KRT39-201ENST00000355612 DNAJC18Q9H819 358 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 RIC8AQ9NPQ8 531 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 FANCLQ9NW38 375 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 BIN2Q9UBW5 565 aaPredicted RBP7.38□□□□□ -1.23
KRT39-201ENST00000355612 R3HCC1Q9Y3T6 440 aaKnown RBP7.38□□□□□ -1.23
KRT39-201ENST00000355612 NFE2L3Q9Y4A8 694 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 PCDHAC2Q9Y5I4 1007 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 BRCA1P38398 1863 aaKnown RBP7.38□□□□□ -1.23
KRT39-201ENST00000355612 FAM196BA6NMK8 535 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 ATP1A3P13637 1013 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 EEF2P13639 858 aaKnown RBP7.38□□□□□ -1.23
KRT39-201ENST00000355612 SEMA3FQ13275 785 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 KARSQ15046 597 aaKnown RBP7.38□□□□□ -1.23
KRT39-201ENST00000355612 DLGAP5Q15398 846 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 FER1L6Q2WGJ9 1857 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 SLFN13Q68D06 897 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 KCTD1Q719H9 257 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 SH3BP5LQ7L8J4 393 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 NIM1KQ8IY84 436 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 C17orf53Q8N3J3 647 aaPredicted RBP7.38□□□□□ -1.23
KRT39-201ENST00000355612 TBCKQ8TEA7 893 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 CCDC47Q96A33 483 aaKnown RBP7.38□□□□□ -1.23
KRT39-201ENST00000355612 COA7Q96BR5 231 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 ATAD5Q96QE3 1844 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 CSRNP1Q96S65 589 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 NAP1L4Q99733 375 aaKnown RBP7.38□□□□□ -1.23
KRT39-201ENST00000355612 RAB34Q9BZG1 259 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 HSD3B7Q9H2F3 369 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 TMEM60Q9H2L4 133 aa7.38□□□□□ -1.23
KRT39-201ENST00000355612 HERC5Q9UII4 1024 aaKnown RBP7.38□□□□□ -1.23
KRT39-201ENST00000355612 USP17L10C9JJH3 530 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 RPN1P04843 607 aaKnown RBP7.37□□□□□ -1.23
KRT39-201ENST00000355612 SKILP12757 684 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 DPEP1P16444 411 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 SLC16A2P36021 539 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 TNNI2P48788 182 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 FMR1Q06787 632 aaKnown RBP eCLIP7.37□□□□□ -1.23
KRT39-201ENST00000355612 SEPT2Q15019 361 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 CALCRLQ16602 461 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 TPD52L1Q16890 204 aaPredicted RBP7.37□□□□□ -1.23
KRT39-201ENST00000355612 ZNF658Q5TYW1 1059 aaPredicted RBP7.37□□□□□ -1.23
KRT39-201ENST00000355612 SPATA1Q5VX52 437 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 MCTP2Q6DN12 878 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 TTBK2Q6IQ55 1244 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 KLHL10Q6JEL2 608 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 CABP7Q86V35 215 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 TRMT44Q8IYL2 757 aaKnown RBP7.37□□□□□ -1.23
KRT39-201ENST00000355612 GMCL1P1Q8NEA9 526 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 MTMR8Q96EF0 704 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 CALML4Q96GE6 196 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 MS4A3Q96HJ5 214 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 PRMT6Q96LA8 375 aaPredicted RBP7.37□□□□□ -1.23
KRT39-201ENST00000355612 PRIMPOLQ96LW4 560 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 GTPBP4Q9BZE4 634 aaKnown RBP7.37□□□□□ -1.23
KRT39-201ENST00000355612 BLZF1Q9H2G9 400 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 NPDC1Q9NQX5 325 aaPredicted RBP7.37□□□□□ -1.23
KRT39-201ENST00000355612 TMEM260Q9NX78 707 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 SYNPO2Q9UMS6 1093 aa7.37□□□□□ -1.23
KRT39-201ENST00000355612 TCP10L2B9ZVM9 353 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 PSMD14O00487 310 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 TBC1D12O60347 775 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 RAD17O75943 681 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 GDF11O95390 407 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 VIL1P09327 827 aaKnown RBP7.36□□□□□ -1.23
KRT39-201ENST00000355612 GCFC2P16383 781 aaKnown RBP7.36□□□□□ -1.23
KRT39-201ENST00000355612 ZNF18P17022 549 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 CASP1P29466 404 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 CCZ1BP86790 482 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 CCZ1P86791 482 aaPredicted RBP7.36□□□□□ -1.23
KRT39-201ENST00000355612 AMPD3Q01432 767 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 IKQ13123 557 aaPredicted RBP7.36□□□□□ -1.23
KRT39-201ENST00000355612 STIM1Q13586 685 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 CUL4BQ13620 913 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 CDC37Q16543 378 aaPredicted RBP7.36□□□□□ -1.23
KRT39-201ENST00000355612 DEFB132Q7Z7B7 95 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 VSTM4Q8IW00 320 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 CCDC112Q8NEF3 446 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 AGBL3Q8NEM8 1001 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 ANKRD20A12PQ8NF67 263 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 STAMQ92783 540 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 GMCL1Q96IK5 515 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 CDK5RAP3Q96JB5 506 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 CTAGE1Q96RT6 745 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 PSTPIP2Q9H939 334 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.36□□□□□ -1.23
KRT39-201ENST00000355612 CDHR5Q9HBB8 845 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 ARHGEF10LQ9HCE6 1279 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 ZNF277Q9NRM2 450 aaPredicted RBP7.36□□□□□ -1.23
KRT39-201ENST00000355612 ZNRF3Q9ULT6 936 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 CTNND2Q9UQB3 1225 aa7.36□□□□□ -1.23
KRT39-201ENST00000355612 PP2D1A8MPX8 630 aa7.35□□□□□ -1.23
KRT39-201ENST00000355612 PPP1R3GB7ZBB8 358 aa7.35□□□□□ -1.23
KRT39-201ENST00000355612 F5H6K3 240 aa7.35□□□□□ -1.23
KRT39-201ENST00000355612 CCP110O43303 1012 aa7.35□□□□□ -1.23
KRT39-201ENST00000355612 MARCH6O60337 910 aa7.35□□□□□ -1.23
KRT39-201ENST00000355612 PPP1R11O60927 126 aaPredicted RBP7.35□□□□□ -1.23
KRT39-201ENST00000355612 GH2P01242 217 aa7.35□□□□□ -1.23
KRT39-201ENST00000355612 PLCG1P19174 1290 aa7.35□□□□□ -1.23
KRT39-201ENST00000355612 POLD1P28340 1107 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms