RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 PYM1Q9BRP8 204 aaKnown RBP20■□□□□ 0.79
CTSB-202ENST00000353047 HPCAL4Q9UM19 191 aa20■□□□□ 0.79
CTSB-202ENST00000353047 PPFIA4O75335 1185 aa20■□□□□ 0.79
CTSB-202ENST00000353047 HERVK_113P62684 666 aa20■□□□□ 0.79
CTSB-202ENST00000353047 KLHL30Q0D2K2 578 aa20■□□□□ 0.79
CTSB-202ENST00000353047 NNTQ13423 1086 aa20■□□□□ 0.79
CTSB-202ENST00000353047 CT47A1Q5JQC4 288 aaPredicted RBP20■□□□□ 0.79
CTSB-202ENST00000353047 TRIM58Q8NG06 486 aa20■□□□□ 0.79
CTSB-202ENST00000353047 PLCD4Q9BRC7 762 aa20■□□□□ 0.79
CTSB-202ENST00000353047 BUB1BO60566 1050 aaPredicted RBP19.99■□□□□ 0.79
CTSB-202ENST00000353047 OR52Z1P0C646 297 aa19.99■□□□□ 0.79
CTSB-202ENST00000353047 SEC24CP53992 1094 aa19.99■□□□□ 0.79
CTSB-202ENST00000353047 TROAPQ12815 778 aa19.99■□□□□ 0.79
CTSB-202ENST00000353047 TBC1D10BQ4KMP7 808 aaPredicted RBP19.99■□□□□ 0.79
CTSB-202ENST00000353047 MAEAQ7L5Y9 396 aa19.99■□□□□ 0.79
CTSB-202ENST00000353047 TICAM2Q86XR7 235 aa19.99■□□□□ 0.79
CTSB-202ENST00000353047 FAM133AQ8N9E0 248 aa19.99■□□□□ 0.79
CTSB-202ENST00000353047 OR2W6PQ8NHA6 318 aa19.99■□□□□ 0.79
CTSB-202ENST00000353047 CALCRLQ16602 461 aa19.99■□□□□ 0.79
CTSB-202ENST00000353047 ARL8AQ96BM9 186 aa19.99■□□□□ 0.79
CTSB-202ENST00000353047 PIGSQ96S52 555 aa19.99■□□□□ 0.79
CTSB-202ENST00000353047 UBE2SQ16763 222 aa19.99■□□□□ 0.79
CTSB-202ENST00000353047 CDKAL1Q5VV42 579 aa19.99■□□□□ 0.79
CTSB-202ENST00000353047 ABCC12Q96J65 1359 aa19.98■□□□□ 0.79
CTSB-202ENST00000353047 NWD1Q149M9 1564 aa19.98■□□□□ 0.79
CTSB-202ENST00000353047 ZNF76P36508 570 aa19.98■□□□□ 0.79
CTSB-202ENST00000353047 LONP1P36776 959 aaKnown RBP19.98■□□□□ 0.79
CTSB-202ENST00000353047 DCP1AQ9NPI6 582 aaPredicted RBP19.98■□□□□ 0.79
CTSB-202ENST00000353047 ECM2O94769 699 aaPredicted RBP19.98■□□□□ 0.79
CTSB-202ENST00000353047 KRT13P13646 458 aa19.98■□□□□ 0.79
CTSB-202ENST00000353047 SLC1A4P43007 532 aa19.98■□□□□ 0.79
CTSB-202ENST00000353047 CNNM4Q6P4Q7 775 aa19.98■□□□□ 0.79
CTSB-202ENST00000353047 SETDB2Q96T68 719 aa19.98■□□□□ 0.79
CTSB-202ENST00000353047 PCDHA4Q9UN74 947 aa19.98■□□□□ 0.79
CTSB-202ENST00000353047 ZBED6P86452 979 aa19.98■□□□□ 0.79
CTSB-202ENST00000353047 TUBB2AQ13885 445 aa19.98■□□□□ 0.79
CTSB-202ENST00000353047 PACS2Q86VP3 889 aa19.98■□□□□ 0.79
CTSB-202ENST00000353047 MTRQ99707 1265 aa19.98■□□□□ 0.79
CTSB-202ENST00000353047 TUBB2BQ9BVA1 445 aa19.98■□□□□ 0.79
CTSB-202ENST00000353047 NDST4Q9H3R1 872 aa19.98■□□□□ 0.79
CTSB-202ENST00000353047 CPLX4Q7Z7G2 160 aa19.97■□□□□ 0.79
CTSB-202ENST00000353047 SPATA4Q8NEY3 305 aa19.97■□□□□ 0.79
CTSB-202ENST00000353047 GIMAP7Q8NHV1 300 aa19.97■□□□□ 0.79
CTSB-202ENST00000353047 LIMA1Q9UHB6 759 aaKnown RBP19.97■□□□□ 0.79
CTSB-202ENST00000353047 MEIS1O00470 390 aa19.97■□□□□ 0.79
CTSB-202ENST00000353047 PDE6BP35913 854 aa19.97■□□□□ 0.79
CTSB-202ENST00000353047 PPFIA1Q13136 1202 aa19.97■□□□□ 0.79
CTSB-202ENST00000353047 CFAP221Q4G0U5 840 aa19.97■□□□□ 0.79
CTSB-202ENST00000353047 TEX11Q8IYF3 940 aa19.97■□□□□ 0.79
CTSB-202ENST00000353047 REXO1Q8N1G1 1221 aaKnown RBP19.97■□□□□ 0.79
CTSB-202ENST00000353047 WDR19Q8NEZ3 1342 aa19.97■□□□□ 0.79
CTSB-202ENST00000353047 JPH2Q9BR39 696 aaPredicted RBP19.97■□□□□ 0.79
CTSB-202ENST00000353047 SLAIN2Q9P270 581 aa19.97■□□□□ 0.79
CTSB-202ENST00000353047 SRP68Q9UHB9 627 aaKnown RBP19.97■□□□□ 0.79
CTSB-202ENST00000353047 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.97■□□□□ 0.79
CTSB-202ENST00000353047 BAG3O95817 575 aa19.97■□□□□ 0.79
CTSB-202ENST00000353047 TUBBP07437 444 aa19.97■□□□□ 0.79
CTSB-202ENST00000353047 MAGEA9P43362 315 aa19.97■□□□□ 0.79
CTSB-202ENST00000353047 RPS8P62241 208 aaKnown RBP19.97■□□□□ 0.79
CTSB-202ENST00000353047 CYP4A11Q02928 519 aa19.97■□□□□ 0.79
CTSB-202ENST00000353047 SLC9C1Q4G0N8 1177 aa19.97■□□□□ 0.79
CTSB-202ENST00000353047 DDX42Q86XP3 938 aaKnown RBP eCLIP19.97■□□□□ 0.79
CTSB-202ENST00000353047 E2F5Q15329 346 aa19.96■□□□□ 0.79
CTSB-202ENST00000353047 ALX1Q15699 326 aa19.96■□□□□ 0.79
CTSB-202ENST00000353047 POTEDQ86YR6 584 aa19.96■□□□□ 0.79
CTSB-202ENST00000353047 DYDC1Q8WWB3 177 aa19.96■□□□□ 0.79
CTSB-202ENST00000353047 RAB34Q9BZG1 259 aa19.96■□□□□ 0.79
CTSB-202ENST00000353047 REXO2Q9Y3B8 237 aaKnown RBP19.96■□□□□ 0.79
CTSB-202ENST00000353047 PCDHB13Q9Y5F0 798 aa19.96■□□□□ 0.79
CTSB-202ENST00000353047 CHMP2AO43633 222 aa19.96■□□□□ 0.79
CTSB-202ENST00000353047 EEF1GP26641 437 aaKnown RBP19.96■□□□□ 0.79
CTSB-202ENST00000353047 ADSSL1Q8N142 457 aa19.96■□□□□ 0.79
CTSB-202ENST00000353047 CARD10Q9BWT7 1032 aa19.96■□□□□ 0.79
CTSB-202ENST00000353047 PKD2L1Q9P0L9 805 aa19.96■□□□□ 0.79
CTSB-202ENST00000353047 MAP2K7O14733 419 aa19.96■□□□□ 0.79
CTSB-202ENST00000353047 CCNE1P24864 410 aa19.96■□□□□ 0.79
CTSB-202ENST00000353047 CARSP49589 748 aaKnown RBP19.96■□□□□ 0.79
CTSB-202ENST00000353047 IL17AQ16552 155 aa19.96■□□□□ 0.79
CTSB-202ENST00000353047 KCND1Q9NSA2 647 aa19.96■□□□□ 0.79
CTSB-202ENST00000353047 RBM12Q9NTZ6 932 aaKnown RBP19.96■□□□□ 0.79
CTSB-202ENST00000353047 ADCY1Q08828 1119 aa19.95■□□□□ 0.78
CTSB-202ENST00000353047 OSBPL9Q96SU4 736 aa19.95■□□□□ 0.78
CTSB-202ENST00000353047 EYA3Q99504 573 aa19.95■□□□□ 0.78
CTSB-202ENST00000353047 FAM184BQ9ULE4 1060 aa19.95■□□□□ 0.78
CTSB-202ENST00000353047 SNAP25P60880 206 aa19.95■□□□□ 0.78
CTSB-202ENST00000353047 BRINP3Q76B58 766 aa19.95■□□□□ 0.78
CTSB-202ENST00000353047 TADA2BQ86TJ2 420 aa19.95■□□□□ 0.78
CTSB-202ENST00000353047 IFT20Q8IY31 132 aa19.95■□□□□ 0.78
CTSB-202ENST00000353047 NUP58Q9BVL2 599 aa19.95■□□□□ 0.78
CTSB-202ENST00000353047 LOC102724428A0A0B4J2F2 783 aa19.95■□□□□ 0.78
CTSB-202ENST00000353047 NKRFO15226 690 aaKnown RBP eCLIP19.95■□□□□ 0.782e-7■■□□□ 14
CTSB-202ENST00000353047 PALMO75781 387 aa19.95■□□□□ 0.78
CTSB-202ENST00000353047 FGFR1OPO95684 399 aaKnown RBP19.95■□□□□ 0.78
CTSB-202ENST00000353047 SIK1P57059 783 aa19.95■□□□□ 0.78
CTSB-202ENST00000353047 PFKFB3Q16875 520 aaPredicted RBP19.95■□□□□ 0.78
CTSB-202ENST00000353047 SFMBT2Q5VUG0 894 aa19.95■□□□□ 0.78
CTSB-202ENST00000353047 CCNI2Q6ZMN8 369 aaPredicted RBP19.95■□□□□ 0.78
CTSB-202ENST00000353047 MYO1AQ9UBC5 1043 aa19.95■□□□□ 0.78
CTSB-202ENST00000353047 SLIT1O75093 1534 aa19.94■□□□□ 0.78
CTSB-202ENST00000353047 SPATA31A3Q5VYP0 1347 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms