RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 TUBA8Q9NY65 449 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 GADL1Q6ZQY3 521 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 CCDC117Q8IWD4 279 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 METTL13Q8N6R0 699 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 DSCC1Q9BVC3 393 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 TRIM31Q9BZY9 425 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 CEP170Q5SW79 1584 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 DAPK3O43293 454 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 KRT10P13645 584 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 PECAM1P16284 738 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 CNGA1P29973 690 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 ADORA1P30542 326 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 PPP2R5DQ14738 602 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 GLG1Q92896 1179 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 ST7Q9NRC1 585 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 MLH1P40692 756 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 OLFML2BQ68BL8 750 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 MIEF2Q96C03 454 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 QTRT2Q9H974 415 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 TMEM165Q9HC07 324 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 MTRF1LQ9UGC7 380 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 SERTAD1Q9UHV2 236 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 MCF2LO15068 1137 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 GSPT1P15170 499 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 NEK2P51955 445 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 BTN2A1Q7KYR7 527 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 PDE6AP16499 860 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 TECP42680 631 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 ICA1Q05084 483 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 ARHGAP44Q17R89 818 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 ARHGEF16Q5VV41 709 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 TTC1Q99614 292 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 GLT8D2Q9H1C3 349 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 DKK3Q9UBP4 350 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 CSADQ9Y600 493 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 LOC102724428A0A0B4J2F2 783 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 CHRM1P11229 460 aaPredicted RBP12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 SIK1P57059 783 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 NLRP12P59046 1061 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 ETF1P62495 437 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 FAM102BQ5T8I3 360 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 MAP3K21Q5TCX8 1036 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 CYP26C1Q6V0L0 522 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 HOOK2Q96ED9 719 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 PARD6BQ9BYG5 372 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 IQCA1LA6NCM1 817 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 GAS7O60861 476 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 CCDC159P0C7I6 412 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 CD19P15391 556 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 PPP1R14BQ96C90 147 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 THOC1Q96FV9 657 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 COQ7Q99807 217 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 LZTS2Q9BRK4 669 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 SEPT10Q9P0V9 454 aa12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMARCE1-202ENST00000348513 KIAA0232Q92628 1395 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 KDM2BQ8NHM5 1336 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 EVI5O60447 810 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 BAG2O95816 211 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 SCRN1Q12765 414 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 ENAHQ8N8S7 591 aaPredicted RBP12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 TPCN1Q9ULQ1 816 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 NFE2L3Q9Y4A8 694 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 ABCA5Q8WWZ7 1642 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 PHKA1P46020 1223 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 FAM47CQ5HY64 1035 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 SRGAP1Q7Z6B7 1085 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 MYO1AQ9UBC5 1043 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 TMEM94Q12767 1356 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 CLRN2A0PK11 232 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 ZWINTO95229 277 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 RNF169Q8NCN4 708 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 ANGPTL2Q9UKU9 493 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 KDM5AP29375 1690 aaKnown RBP12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 IPO5O00410 1097 aaKnown RBP12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 DNM2P50570 870 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 CERKLQ49MI3 558 aaPredicted RBP12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 SPOUT1Q5T280 376 aaKnown RBP12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 LIN9Q5TKA1 542 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 CC2D1AQ6P1N0 951 aaPredicted RBP12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 NLRX1Q86UT6 975 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 ZNF710Q8N1W2 664 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 FAM81AQ8TBF8 368 aa12.09□□□□□ -0.47
SMARCE1-202ENST00000348513 GNAT1P11488 350 aa12.08□□□□□ -0.47
SMARCE1-202ENST00000348513 ADD1P35611 737 aaKnown RBP12.08□□□□□ -0.47
SMARCE1-202ENST00000348513 PPP1R2P41236 205 aa12.08□□□□□ -0.47
SMARCE1-202ENST00000348513 CYP2J2P51589 502 aa12.08□□□□□ -0.47
SMARCE1-202ENST00000348513 NDEL1Q9GZM8 345 aa12.08□□□□□ -0.47
SMARCE1-202ENST00000348513 METP08581 1390 aa12.08□□□□□ -0.47
SMARCE1-202ENST00000348513 NPC1L1Q9UHC9 1359 aa12.08□□□□□ -0.47
SMARCE1-202ENST00000348513 PLXNC1O60486 1568 aa12.08□□□□□ -0.47
SMARCE1-202ENST00000348513 DKC1O60832 514 aaKnown RBP eCLIP12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 HSPD1P10809 573 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 ATP2B4P23634 1241 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 CCDC15Q0P6D6 951 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 VWA3BQ502W6 1294 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 CDAN1Q8IWY9 1227 aa12.08□□□□□ -0.48
SMARCE1-202ENST00000348513 GPT2Q8TD30 523 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms